RNA–Protein interactions for RNA: ENST00000542381.1

SRGAP1-204, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 360 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-204ENST00000542381 HMGN4O00479 90 aa1.15□□□□□ -2.23
SRGAP1-204ENST00000542381 NMBP08949 121 aa1.15□□□□□ -2.23
SRGAP1-204ENST00000542381 MANBALQ9NQG1 85 aa1.15□□□□□ -2.23
SRGAP1-204ENST00000542381 RGPD4Q7Z3J3 1758 aa1.14□□□□□ -2.23
SRGAP1-204ENST00000542381 MYOM1P52179 1685 aa1.14□□□□□ -2.23
SRGAP1-204ENST00000542381 SHANK2Q9UPX8 1470 aa1.14□□□□□ -2.23
SRGAP1-204ENST00000542381 NAP1L6A6NFF2 107 aa1.14□□□□□ -2.23
SRGAP1-204ENST00000542381 TMEM262E9PQX1 116 aa1.14□□□□□ -2.23
SRGAP1-204ENST00000542381 G3V318 75 aa1.14□□□□□ -2.23
SRGAP1-204ENST00000542381 SPATA8Q6RVD6 105 aa1.14□□□□□ -2.23
SRGAP1-204ENST00000542381 UNC79Q9P2D8 2635 aa1.14□□□□□ -2.23
SRGAP1-204ENST00000542381 CACNA1AO00555 2505 aa1.14□□□□□ -2.23
SRGAP1-204ENST00000542381 F8VRH5 84 aa1.13□□□□□ -2.23
SRGAP1-204ENST00000542381 S100A8P05109 93 aa1.13□□□□□ -2.23
SRGAP1-204ENST00000542381 Q0VG73 95 aa1.13□□□□□ -2.23
SRGAP1-204ENST00000542381 Q5VV11 94 aa1.13□□□□□ -2.23
SRGAP1-204ENST00000542381 SMIM4Q8WVI0 70 aa1.13□□□□□ -2.23
SRGAP1-204ENST00000542381 NOTCH1P46531 2555 aa1.13□□□□□ -2.23
SRGAP1-204ENST00000542381 PDCD11Q14690 1871 aaKnown RBP1.13□□□□□ -2.23
SRGAP1-204ENST00000542381 MYO7BQ6PIF6 2116 aa1.13□□□□□ -2.23
SRGAP1-204ENST00000542381 ZNF609O15014 1411 aa1.13□□□□□ -2.23
SRGAP1-204ENST00000542381 ARHGEF5Q12774 1597 aa1.13□□□□□ -2.23
SRGAP1-204ENST00000542381 CACNA1EQ15878 2313 aa1.12□□□□□ -2.23
SRGAP1-204ENST00000542381 RGPD3A6NKT7 1758 aaPredicted RBP1.12□□□□□ -2.23
SRGAP1-204ENST00000542381 LOC285095A0A1B0GVY8 99 aa1.12□□□□□ -2.23
SRGAP1-204ENST00000542381 IGLC7A0M8Q6 106 aa1.12□□□□□ -2.23
SRGAP1-204ENST00000542381 CRYM-AS1A6NIL9 109 aa1.12□□□□□ -2.23
SRGAP1-204ENST00000542381 H3BQ15 152 aa1.12□□□□□ -2.23
SRGAP1-204ENST00000542381 BAGE2Q86Y30 109 aa1.12□□□□□ -2.23
SRGAP1-204ENST00000542381 F8P00451 2351 aa1.12□□□□□ -2.23
SRGAP1-204ENST00000542381 GAPVD1Q14C86 1478 aa1.12□□□□□ -2.23
SRGAP1-204ENST00000542381 ABCC10Q5T3U5 1492 aa1.12□□□□□ -2.23
SRGAP1-204ENST00000542381 RAPGEF2Q9Y4G8 1499 aa1.12□□□□□ -2.23
SRGAP1-204ENST00000542381 UTRNP46939 3433 aa1.11□□□□□ -2.23
SRGAP1-204ENST00000542381 PKD1L2Q7Z442 2459 aa1.11□□□□□ -2.23
SRGAP1-204ENST00000542381 SCN7AQ01118 1682 aa1.11□□□□□ -2.23
SRGAP1-204ENST00000542381 PLXNB2O15031 1838 aa1.11□□□□□ -2.23
SRGAP1-204ENST00000542381 TMEM170BQ5T4T1 132 aa1.11□□□□□ -2.23
SRGAP1-204ENST00000542381 SFTA2Q6UW10 78 aa1.11□□□□□ -2.23
SRGAP1-204ENST00000542381 UBE2DNLQ8IWF7 75 aa1.11□□□□□ -2.23
SRGAP1-204ENST00000542381 PROK2Q9HC23 129 aa1.11□□□□□ -2.23
SRGAP1-204ENST00000542381 UNC13BO14795 1591 aa1.11□□□□□ -2.23
SRGAP1-204ENST00000542381 TTC28Q96AY4 2481 aa1.11□□□□□ -2.23
SRGAP1-204ENST00000542381 KIF21BO75037 1637 aa1.11□□□□□ -2.23
SRGAP1-204ENST00000542381 PPLO60437 1756 aa1.11□□□□□ -2.23
SRGAP1-204ENST00000542381 PLCE1Q9P212 2302 aa1.1□□□□□ -2.23
SRGAP1-204ENST00000542381 APOC3P02656 99 aa1.1□□□□□ -2.23
SRGAP1-204ENST00000542381 COX17Q14061 63 aa1.1□□□□□ -2.23
SRGAP1-204ENST00000542381 ACBD7Q8N6N7 88 aa1.1□□□□□ -2.23
SRGAP1-204ENST00000542381 AMELXQ99217 191 aa1.1□□□□□ -2.23
SRGAP1-204ENST00000542381 KDM3BQ7LBC6 1761 aa1.1□□□□□ -2.23
SRGAP1-204ENST00000542381 PPRC1Q5VV67 1664 aaKnown RBP1.1□□□□□ -2.23
SRGAP1-204ENST00000542381 ZNF469Q96JG9 3925 aaPredicted RBP1.09□□□□□ -2.23
SRGAP1-204ENST00000542381 LRRC37A2A6NM11 1700 aa1.09□□□□□ -2.23
SRGAP1-204ENST00000542381 PCNTO95613 3336 aa1.09□□□□□ -2.23
SRGAP1-204ENST00000542381 DIP2BQ9P265 1576 aa1.09□□□□□ -2.23
SRGAP1-204ENST00000542381 MYH4Q9Y623 1939 aa1.09□□□□□ -2.23
SRGAP1-204ENST00000542381 RAPGEF6Q8TEU7 1601 aa1.09□□□□□ -2.23
SRGAP1-204ENST00000542381 hADV29S1A0JD25 119 aa1.09□□□□□ -2.23
SRGAP1-204ENST00000542381 UQCR11O14957 56 aa1.09□□□□□ -2.23
SRGAP1-204ENST00000542381 KRTDAPP60985 99 aa1.09□□□□□ -2.23
SRGAP1-204ENST00000542381 NCMAPQ5T1S8 102 aa1.09□□□□□ -2.23
SRGAP1-204ENST00000542381 FAM167A-AS1Q96KT0 104 aa1.09□□□□□ -2.23
SRGAP1-204ENST00000542381 FAM208BQ5VWN6 2430 aa1.09□□□□□ -2.24
SRGAP1-204ENST00000542381 ALKQ9UM73 1620 aa1.08□□□□□ -2.24
SRGAP1-204ENST00000542381 ABCC5O15440 1437 aa1.08□□□□□ -2.24
SRGAP1-204ENST00000542381 TROQ12816 1431 aaPredicted RBP1.08□□□□□ -2.24
SRGAP1-204ENST00000542381 IQSEC2Q5JU85 1478 aa1.08□□□□□ -2.24
SRGAP1-204ENST00000542381 TRAV22A0A0B4J277 110 aa1.08□□□□□ -2.24
SRGAP1-204ENST00000542381 TRAPPC2P0DI81 140 aa1.08□□□□□ -2.24
SRGAP1-204ENST00000542381 TRAPPC2BP0DI82 140 aa1.08□□□□□ -2.24
SRGAP1-204ENST00000542381 FRAS1Q86XX4 4008 aa1.08□□□□□ -2.24
SRGAP1-204ENST00000542381 MADDQ8WXG6 1647 aa1.07□□□□□ -2.24
SRGAP1-204ENST00000542381 ADGRL2O95490 1459 aa1.07□□□□□ -2.24
SRGAP1-204ENST00000542381 EHBP1L1Q8N3D4 1523 aa1.07□□□□□ -2.24
SRGAP1-204ENST00000542381 M0R143 59 aa1.07□□□□□ -2.24
SRGAP1-204ENST00000542381 SFT2D2O95562 160 aa1.07□□□□□ -2.24
SRGAP1-204ENST00000542381 PKIAP61925 76 aa1.07□□□□□ -2.24
SRGAP1-204ENST00000542381 HAMPP81172 84 aa1.07□□□□□ -2.24
SRGAP1-204ENST00000542381 PRO1854Q9UHT4 67 aa1.07□□□□□ -2.24
SRGAP1-204ENST00000542381 A0A0C4DFX4 3053 aa1.07□□□□□ -2.24
SRGAP1-204ENST00000542381 TNRC18O15417 2968 aaPredicted RBP1.07□□□□□ -2.24
SRGAP1-204ENST00000542381 UBR1Q8IWV7 1749 aa1.06□□□□□ -2.24
SRGAP1-204ENST00000542381 CLASP1Q7Z460 1538 aa1.06□□□□□ -2.24
SRGAP1-204ENST00000542381 GNGT2O14610 69 aa1.06□□□□□ -2.24
SRGAP1-204ENST00000542381 PIN1P1O15428 100 aa1.06□□□□□ -2.24
SRGAP1-204ENST00000542381 COX6CP09669 75 aa1.06□□□□□ -2.24
SRGAP1-204ENST00000542381 GNG2P59768 71 aa1.06□□□□□ -2.24
SRGAP1-204ENST00000542381 UBE2D3P61077 147 aa1.06□□□□□ -2.24
SRGAP1-204ENST00000542381 UBE2D2P62837 147 aa1.06□□□□□ -2.24
SRGAP1-204ENST00000542381 FAM223AQ8IWN6 122 aa1.06□□□□□ -2.24
SRGAP1-204ENST00000542381 SNHG12Q9BXW3 62 aa1.06□□□□□ -2.24
SRGAP1-204ENST00000542381 CDC42SE2Q9NRR3 84 aa1.06□□□□□ -2.24
SRGAP1-204ENST00000542381 AP4S1Q9Y587 144 aa1.06□□□□□ -2.24
SRGAP1-204ENST00000542381 ARL2-SNX15V9GYD0 113 aa1.06□□□□□ -2.24
SRGAP1-204ENST00000542381 MON2Q7Z3U7 1717 aa1.06□□□□□ -2.24
SRGAP1-204ENST00000542381 KIF20BQ96Q89 1820 aa1.05□□□□□ -2.24
SRGAP1-204ENST00000542381 LRRC7Q96NW7 1537 aa1.05□□□□□ -2.24
SRGAP1-204ENST00000542381 TENM3Q9P273 2699 aa1.05□□□□□ -2.24
SRGAP1-204ENST00000542381 MPC2O95563 127 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms