RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 ESM1Q9NQ30 184 aa9.82□□□□□ -0.84
PTPN1-202ENST00000541713 PRO0461Q9UI25 63 aa9.82□□□□□ -0.84
PTPN1-202ENST00000541713 TRBV7-9A0A0J9YWB2 115 aa9.82□□□□□ -0.84
PTPN1-202ENST00000541713 INSP01308 110 aa9.82□□□□□ -0.84
PTPN1-202ENST00000541713 COX6A2Q02221 97 aa9.82□□□□□ -0.84
PTPN1-202ENST00000541713 POM121L12Q8N7R1 296 aa9.82□□□□□ -0.84
PTPN1-202ENST00000541713 DNAJC9-AS1A6NH13 148 aa9.81□□□□□ -0.84
PTPN1-202ENST00000541713 DEFB130BP0DP73 79 aa9.81□□□□□ -0.84
PTPN1-202ENST00000541713 DEFB130AP0DP74 79 aa9.81□□□□□ -0.84
PTPN1-202ENST00000541713 ANKRD29Q8N6D5 301 aa9.81□□□□□ -0.84
PTPN1-202ENST00000541713 TRBV6-5A0A0K0K1A5 114 aa9.81□□□□□ -0.84
PTPN1-202ENST00000541713 CCL24O00175 119 aa9.81□□□□□ -0.84
PTPN1-202ENST00000541713 LEPROTO15243 131 aa9.81□□□□□ -0.84
PTPN1-202ENST00000541713 FOXI1Q12951 378 aa9.81□□□□□ -0.84
PTPN1-202ENST00000541713 AMELXQ99217 191 aa9.81□□□□□ -0.84
PTPN1-202ENST00000541713 RHOHQ15669 191 aa9.81□□□□□ -0.84
PTPN1-202ENST00000541713 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.81□□□□□ -0.84
PTPN1-202ENST00000541713 A8MWV9 139 aa9.8□□□□□ -0.84
PTPN1-202ENST00000541713 MT-ATP8P03928 68 aa9.8□□□□□ -0.84
PTPN1-202ENST00000541713 MEIG1Q5JSS6 88 aa9.8□□□□□ -0.84
PTPN1-202ENST00000541713 DEFB4AO15263 64 aa9.8□□□□□ -0.84
PTPN1-202ENST00000541713 TMEM89A2RUT3 159 aa9.8□□□□□ -0.84
PTPN1-202ENST00000541713 CLPSL2Q6UWE3 100 aa9.8□□□□□ -0.84
PTPN1-202ENST00000541713 NTN5Q8WTR8 489 aaPredicted RBP9.8□□□□□ -0.84
PTPN1-202ENST00000541713 J3QLI3 93 aa9.79□□□□□ -0.84
PTPN1-202ENST00000541713 BRI3O95415 125 aa9.79□□□□□ -0.84
PTPN1-202ENST00000541713 FHL3Q13643 280 aa9.79□□□□□ -0.84
PTPN1-202ENST00000541713 SLC25A20O43772 301 aa9.79□□□□□ -0.84
PTPN1-202ENST00000541713 CHCHD7Q9BUK0 85 aa9.79□□□□□ -0.84
PTPN1-202ENST00000541713 Q9H8V8 135 aa9.79□□□□□ -0.84
PTPN1-202ENST00000541713 HIVEP1P15822 2718 aa9.79□□□□□ -0.84
PTPN1-202ENST00000541713 OTOGQ6ZRI0 2925 aa9.78□□□□□ -0.84
PTPN1-202ENST00000541713 CARD19Q96LW7 228 aa9.78□□□□□ -0.84
PTPN1-202ENST00000541713 IGHV3-33P01772 117 aa9.78□□□□□ -0.84
PTPN1-202ENST00000541713 GAGE6Q13070 117 aa9.78□□□□□ -0.84
PTPN1-202ENST00000541713 C1orf158Q8N1D5 194 aa9.78□□□□□ -0.84
PTPN1-202ENST00000541713 TEX49A0A1B0GTD5 131 aa9.77□□□□□ -0.85
PTPN1-202ENST00000541713 FAM104AQ969W3 186 aa9.77□□□□□ -0.85
PTPN1-202ENST00000541713 C1QTNF4Q9BXJ3 329 aa9.77□□□□□ -0.85
PTPN1-202ENST00000541713 UBE2D4Q9Y2X8 147 aa9.77□□□□□ -0.85
PTPN1-202ENST00000541713 PDZD2O15018 2839 aa9.77□□□□□ -0.85
PTPN1-202ENST00000541713 TRIAP1O43715 76 aa9.76□□□□□ -0.85
PTPN1-202ENST00000541713 C4orf3Q8WVX3 66 aa9.76□□□□□ -0.85
PTPN1-202ENST00000541713 C11orf72Q8NBR9 251 aa9.75□□□□□ -0.85
PTPN1-202ENST00000541713 PRIMA1Q86XR5 153 aa9.75□□□□□ -0.85
PTPN1-202ENST00000541713 ODF3Q96PU9 254 aa9.75□□□□□ -0.85
PTPN1-202ENST00000541713 TRGV4A0A0C4DH28 118 aa9.75□□□□□ -0.85
PTPN1-202ENST00000541713 UBE2L6O14933 153 aa9.75□□□□□ -0.85
PTPN1-202ENST00000541713 RPL13AP40429 203 aaKnown RBP9.75□□□□□ -0.85
PTPN1-202ENST00000541713 XGP55808 180 aa9.75□□□□□ -0.85
PTPN1-202ENST00000541713 IGHV1-58A0A0C4DH39 117 aa9.74□□□□□ -0.85
PTPN1-202ENST00000541713 CRLF1O75462 422 aa9.74□□□□□ -0.85
PTPN1-202ENST00000541713 UBE2D3P61077 147 aa9.74□□□□□ -0.85
PTPN1-202ENST00000541713 UBE2D2P62837 147 aa9.74□□□□□ -0.85
PTPN1-202ENST00000541713 TMEM263Q8WUH6 116 aaKnown RBP9.74□□□□□ -0.85
PTPN1-202ENST00000541713 PIK3CD-AS1Q5SR53 167 aa9.74□□□□□ -0.85
PTPN1-202ENST00000541713 VSIG2Q96IQ7 327 aa9.74□□□□□ -0.85
PTPN1-202ENST00000541713 TMEM262E9PQX1 116 aa9.73□□□□□ -0.85
PTPN1-202ENST00000541713 TMEM101Q96IK0 257 aa9.73□□□□□ -0.85
PTPN1-202ENST00000541713 RPL32P62910 135 aaKnown RBP9.73□□□□□ -0.85
PTPN1-202ENST00000541713 RPL36AP83881 106 aaKnown RBP9.73□□□□□ -0.85
PTPN1-202ENST00000541713 RPL36ALQ969Q0 106 aaKnown RBP9.73□□□□□ -0.85
PTPN1-202ENST00000541713 CHCHD5Q9BSY4 110 aa9.73□□□□□ -0.85
PTPN1-202ENST00000541713 LYRM7Q5U5X0 104 aa9.73□□□□□ -0.85
PTPN1-202ENST00000541713 PFN2P35080 140 aa9.72□□□□□ -0.85
PTPN1-202ENST00000541713 NTM-AS1Q6ZSK4 140 aa9.72□□□□□ -0.85
PTPN1-202ENST00000541713 C5orf38Q86SI9 138 aa9.72□□□□□ -0.85
PTPN1-202ENST00000541713 TEN1Q86WV5 123 aa9.72□□□□□ -0.85
PTPN1-202ENST00000541713 NOTCH1P46531 2555 aa9.71□□□□□ -0.85
PTPN1-202ENST00000541713 C2orf82Q6UX34 121 aa9.71□□□□□ -0.85
PTPN1-202ENST00000541713 MRPS36P82909 103 aaKnown RBP9.71□□□□□ -0.86
PTPN1-202ENST00000541713 LINC01006Q8NI28 216 aa9.71□□□□□ -0.86
PTPN1-202ENST00000541713 PPDPFLQ8WWR9 84 aa9.71□□□□□ -0.86
PTPN1-202ENST00000541713 CKS1BP61024 79 aa9.7□□□□□ -0.86
PTPN1-202ENST00000541713 CDIP1Q9H305 208 aa9.7□□□□□ -0.86
PTPN1-202ENST00000541713 LINC01620Q4KN68 170 aa9.7□□□□□ -0.86
PTPN1-202ENST00000541713 LINC00482Q8N8I6 264 aa9.7□□□□□ -0.86
PTPN1-202ENST00000541713 FSHBP01225 129 aa9.69□□□□□ -0.86
PTPN1-202ENST00000541713 HTN3P15516 51 aa9.69□□□□□ -0.86
PTPN1-202ENST00000541713 LINC00242Q5T6M2 205 aa9.69□□□□□ -0.86
PTPN1-202ENST00000541713 ICOSQ9Y6W8 199 aa9.69□□□□□ -0.86
PTPN1-202ENST00000541713 TRBV20-1A0A075B6N2 111 aa9.69□□□□□ -0.86
PTPN1-202ENST00000541713 TRRAPQ9Y4A5 3859 aa9.69□□□□□ -0.86
PTPN1-202ENST00000541713 SVIPQ8NHG7 77 aa9.69□□□□□ -0.86
PTPN1-202ENST00000541713 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.68□□□□□ -0.86
PTPN1-202ENST00000541713 K7EQD1 137 aa9.68□□□□□ -0.86
PTPN1-202ENST00000541713 TTC32Q5I0X7 151 aa9.68□□□□□ -0.86
PTPN1-202ENST00000541713 KRTAP1-3Q8IUG1 177 aa9.68□□□□□ -0.86
PTPN1-202ENST00000541713 Q8N2B8 174 aa9.68□□□□□ -0.86
PTPN1-202ENST00000541713 LITAFQ99732 161 aa9.68□□□□□ -0.86
PTPN1-202ENST00000541713 ATXN8Q156A1 80 aa9.67□□□□□ -0.86
PTPN1-202ENST00000541713 SPANXA1Q9NS26 97 aa9.67□□□□□ -0.86
PTPN1-202ENST00000541713 NBEAL1Q6ZS30 2694 aa9.67□□□□□ -0.86
PTPN1-202ENST00000541713 IGLV10-54A0A075B6I4 117 aa9.67□□□□□ -0.86
PTPN1-202ENST00000541713 TINCRA0A1B0GVN0 87 aa9.67□□□□□ -0.86
PTPN1-202ENST00000541713 CIRBPQ14011 172 aaKnown RBP9.67□□□□□ -0.86
PTPN1-202ENST00000541713 STAB1Q9NY15 2570 aa9.67□□□□□ -0.86
PTPN1-202ENST00000541713 MAST4O15021 2626 aa9.67□□□□□ -0.86
PTPN1-202ENST00000541713 RS1O15537 224 aa9.66□□□□□ -0.86
PTPN1-202ENST00000541713 PF4P02776 101 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms