RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 ANGP03950 147 aaKnown RBP11.15□□□□□ -0.62
UBC-208ENST00000540700 PKIAP61925 76 aa11.15□□□□□ -0.62
UBC-208ENST00000540700 RNASEKQ6P5S7 137 aaKnown RBP11.15□□□□□ -0.62
UBC-208ENST00000540700 MRPL52Q86TS9 123 aaKnown RBP11.15□□□□□ -0.62
UBC-208ENST00000540700 LINC00269Q8N2A0 174 aa11.15□□□□□ -0.62
UBC-208ENST00000540700 Q9HAA7 133 aa11.15□□□□□ -0.62
UBC-208ENST00000540700 LAGE3Q14657 143 aa11.14□□□□□ -0.63
UBC-208ENST00000540700 PRSS3P2Q8NHM4 247 aa11.14□□□□□ -0.63
UBC-208ENST00000540700 UBE2WQ96B02 151 aa11.14□□□□□ -0.63
UBC-208ENST00000540700 PRR34Q9NV39 138 aa11.14□□□□□ -0.63
UBC-208ENST00000540700 OPRPNQ99935 248 aaPredicted RBP11.13□□□□□ -0.63
UBC-208ENST00000540700 A0A096LNJ9 63 aa11.12□□□□□ -0.63
UBC-208ENST00000540700 LINC00310P59036 64 aa11.12□□□□□ -0.63
UBC-208ENST00000540700 RNASE13Q5GAN3 156 aaKnown RBP11.12□□□□□ -0.63
UBC-208ENST00000540700 AMMECR1LQ6DCA0 310 aa11.12□□□□□ -0.63
UBC-208ENST00000540700 Q6ZUT4 128 aa11.12□□□□□ -0.63
UBC-208ENST00000540700 CDC42SE2Q9NRR3 84 aa11.12□□□□□ -0.63
UBC-208ENST00000540700 K7EMI3 77 aa11.11□□□□□ -0.63
UBC-208ENST00000540700 ZNF25P17030 456 aaPredicted RBP11.11□□□□□ -0.63
UBC-208ENST00000540700 ORMDL2Q53FV1 153 aa11.11□□□□□ -0.63
UBC-208ENST00000540700 C2orf66Q6UXQ4 117 aa11.11□□□□□ -0.63
UBC-208ENST00000540700 FA2HQ7L5A8 372 aa11.11□□□□□ -0.63
UBC-208ENST00000540700 LINC00614P0C842 121 aa11.1□□□□□ -0.63
UBC-208ENST00000540700 BTF3P20290 206 aaKnown RBP11.1□□□□□ -0.63
UBC-208ENST00000540700 REG3AQ06141 175 aa11.1□□□□□ -0.63
UBC-208ENST00000540700 KRTAP26-1Q6PEX3 210 aa11.1□□□□□ -0.63
UBC-208ENST00000540700 OR5A1Q8NGJ0 315 aa11.1□□□□□ -0.63
UBC-208ENST00000540700 TIMM21Q9BVV7 248 aa11.1□□□□□ -0.63
UBC-208ENST00000540700 CSDC2Q9Y534 153 aaKnown RBP11.1□□□□□ -0.63
UBC-208ENST00000540700 Q0VG73 95 aa11.09□□□□□ -0.63
UBC-208ENST00000540700 PMCHL1Q16048 86 aa11.09□□□□□ -0.63
UBC-208ENST00000540700 SPATA12Q7Z6I5 190 aa11.09□□□□□ -0.63
UBC-208ENST00000540700 ZNF664Q8N3J9 261 aa11.09□□□□□ -0.63
UBC-208ENST00000540700 IGLV4-3A0A075B6K6 122 aa11.08□□□□□ -0.64
UBC-208ENST00000540700 TRAV8-3A0A0A6YYJ7 113 aa11.08□□□□□ -0.64
UBC-208ENST00000540700 IGKV3OR2-268A0A0C4DH90 116 aa11.08□□□□□ -0.64
UBC-208ENST00000540700 IGIPA6NJ69 53 aa11.08□□□□□ -0.64
UBC-208ENST00000540700 TMEM18Q96B42 140 aa11.08□□□□□ -0.64
UBC-208ENST00000540700 TOMM6Q96B49 74 aa11.08□□□□□ -0.64
UBC-208ENST00000540700 TMEM101Q96IK0 257 aa11.08□□□□□ -0.64
UBC-208ENST00000540700 AP5S1Q9NUS5 200 aa11.08□□□□□ -0.64
UBC-208ENST00000540700 CYSLTR1Q9Y271 337 aa11.08□□□□□ -0.64
UBC-208ENST00000540700 SRRM2Q9UQ35 2752 aaKnown RBP11.08□□□□□ -0.64
UBC-208ENST00000540700 IGLV10-54A0A075B6I4 117 aa11.07□□□□□ -0.64
UBC-208ENST00000540700 NUPR1O60356 82 aa11.07□□□□□ -0.64
UBC-208ENST00000540700 HIST1H2BKO60814 126 aa11.07□□□□□ -0.64
UBC-208ENST00000540700 CRPP02741 224 aa11.07□□□□□ -0.64
UBC-208ENST00000540700 HIST1H2BJP06899 126 aa11.07□□□□□ -0.64
UBC-208ENST00000540700 HIST1H2BOP23527 126 aa11.07□□□□□ -0.64
UBC-208ENST00000540700 HIST1H2BBP33778 126 aa11.07□□□□□ -0.64
UBC-208ENST00000540700 HIST1H2BDP58876 126 aa11.07□□□□□ -0.64
UBC-208ENST00000540700 HIST1H2BCP62807 126 aa11.07□□□□□ -0.64
UBC-208ENST00000540700 HIST2H2BEQ16778 126 aa11.07□□□□□ -0.64
UBC-208ENST00000540700 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.07□□□□□ -0.64
UBC-208ENST00000540700 ZC2HC1BQ5TFG8 222 aa11.07□□□□□ -0.64
UBC-208ENST00000540700 HIST1H2BHQ93079 126 aa11.07□□□□□ -0.64
UBC-208ENST00000540700 HIST1H2BNQ99877 126 aa11.07□□□□□ -0.64
UBC-208ENST00000540700 HIST1H2BMQ99879 126 aa11.07□□□□□ -0.64
UBC-208ENST00000540700 SPANXA1Q9NS26 97 aa11.07□□□□□ -0.64
UBC-208ENST00000540700 PYGO1Q9Y3Y4 419 aa11.07□□□□□ -0.64
UBC-208ENST00000540700 IGKV2D-24A0A075B6R9 120 aa11.06□□□□□ -0.64
UBC-208ENST00000540700 MRPS36P82909 103 aaKnown RBP11.06□□□□□ -0.64
UBC-208ENST00000540700 WFDC2Q14508 124 aa11.06□□□□□ -0.64
UBC-208ENST00000540700 MIAQ16674 131 aa11.06□□□□□ -0.64
UBC-208ENST00000540700 NFE4Q86UQ8 179 aa11.06□□□□□ -0.64
UBC-208ENST00000540700 DGAT2L7PQ6IED9 249 aa11.05□□□□□ -0.64
UBC-208ENST00000540700 LINC00173Q6ZV60 143 aa11.05□□□□□ -0.64
UBC-208ENST00000540700 LINC00959A0A1B0GUT2 108 aa11.04□□□□□ -0.64
UBC-208ENST00000540700 SERF1AO75920 110 aa11.04□□□□□ -0.64
UBC-208ENST00000540700 BAGE3Q86Y29 109 aa11.04□□□□□ -0.64
UBC-208ENST00000540700 CHCHD1Q96BP2 118 aaKnown RBP11.04□□□□□ -0.64
UBC-208ENST00000540700 FAT1Q14517 4588 aa11.03□□□□□ -0.64
UBC-208ENST00000540700 DNAH8Q96JB1 4490 aa11.03□□□□□ -0.64
UBC-208ENST00000540700 LRCOL1A6NCL2 159 aa11.03□□□□□ -0.64
UBC-208ENST00000540700 EPM2AB3EWF7 344 aa11.03□□□□□ -0.64
UBC-208ENST00000540700 RAB5BP61020 215 aa11.03□□□□□ -0.64
UBC-208ENST00000540700 C1orf43Q9BWL3 253 aa11.03□□□□□ -0.64
UBC-208ENST00000540700 MYCBP2O75592 4640 aa11.03□□□□□ -0.64
UBC-208ENST00000540700 HBDP02042 147 aa11.02□□□□□ -0.65
UBC-208ENST00000540700 INAFM2P0DMQ5 153 aa11.02□□□□□ -0.65
UBC-208ENST00000540700 KRTAP10-2P60368 255 aa11.02□□□□□ -0.65
UBC-208ENST00000540700 SMAGPQ0VAQ4 97 aa11.02□□□□□ -0.65
UBC-208ENST00000540700 PDZD11Q5EBL8 140 aa11.02□□□□□ -0.65
UBC-208ENST00000540700 FAM19A2Q8N3H0 131 aa11.02□□□□□ -0.65
UBC-208ENST00000540700 AMELXQ99217 191 aa11.02□□□□□ -0.65
UBC-208ENST00000540700 TIMM17AQ99595 171 aa11.02□□□□□ -0.65
UBC-208ENST00000540700 CHCHD10Q8WYQ3 142 aaPredicted RBP11.01□□□□□ -0.65
UBC-208ENST00000540700 TMEM141Q96I45 108 aa11.01□□□□□ -0.65
UBC-208ENST00000540700 SCGB3A1Q96QR1 104 aa11.01□□□□□ -0.65
UBC-208ENST00000540700 A0A087WTM6 91 aa11□□□□□ -0.65
UBC-208ENST00000540700 TRAV13-1A0A0B4J241 112 aa11□□□□□ -0.65
UBC-208ENST00000540700 TRAV8-4A0A0B4J246 113 aa11□□□□□ -0.65
UBC-208ENST00000540700 GAGE12HA6NDE8 117 aa11□□□□□ -0.65
UBC-208ENST00000540700 LECT2O14960 151 aa11□□□□□ -0.65
UBC-208ENST00000540700 CCL25O15444 150 aa11□□□□□ -0.65
UBC-208ENST00000540700 FOXI1Q12951 378 aa11□□□□□ -0.65
UBC-208ENST00000540700 ERASQ7Z444 233 aa11□□□□□ -0.65
UBC-208ENST00000540700 BAALCQ8WXS3 180 aa11□□□□□ -0.65
UBC-208ENST00000540700 RMI2Q96E14 147 aa11□□□□□ -0.65
UBC-208ENST00000540700 TM2D2Q9BX73 214 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms