RNA–Protein interactions for RNA: ENST00000540424.5

GABARAPL1-208, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 2

Gene GABARAPL1, Length 2,321 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-208ENST00000540424 TRBV6-5A0A0K0K1A5 114 aa11.13□□□□□ -0.63
GABARAPL1-208ENST00000540424 IGHV3-30-3P0DP02 117 aa11.13□□□□□ -0.63
GABARAPL1-208ENST00000540424 HOXD3P31249 432 aaPredicted RBP11.13□□□□□ -0.63
GABARAPL1-208ENST00000540424 RHOHQ15669 191 aa11.13□□□□□ -0.63
GABARAPL1-208ENST00000540424 NSUN5P1Q3KNT7 163 aa11.13□□□□□ -0.63
GABARAPL1-208ENST00000540424 DAND5Q8N907 189 aa11.13□□□□□ -0.63
GABARAPL1-208ENST00000540424 SUMO4Q6EEV6 95 aa11.13□□□□□ -0.63
GABARAPL1-208ENST00000540424 USP9YO00507 2555 aaPredicted RBP11.12□□□□□ -0.63
GABARAPL1-208ENST00000540424 ADAMTSL4-AS1Q5T5F5 129 aa11.12□□□□□ -0.63
GABARAPL1-208ENST00000540424 KIR2DL5BQ8NHK3 375 aa11.12□□□□□ -0.63
GABARAPL1-208ENST00000540424 COL12A1Q99715 3063 aa11.11□□□□□ -0.63
GABARAPL1-208ENST00000540424 Q6ZSV7 163 aa11.11□□□□□ -0.63
GABARAPL1-208ENST00000540424 A0A0J9YXV3 536 aa11.1□□□□□ -0.63
GABARAPL1-208ENST00000540424 RPL18AQ02543 176 aaKnown RBP11.1□□□□□ -0.63
GABARAPL1-208ENST00000540424 C9orf85Q96MD7 179 aa11.1□□□□□ -0.63
GABARAPL1-208ENST00000540424 DUX5Q96PT3 197 aa11.1□□□□□ -0.63
GABARAPL1-208ENST00000540424 IGHV1OR15-1A0A075B7D0 117 aa11.1□□□□□ -0.63
GABARAPL1-208ENST00000540424 IGHV3-16A0A0C4DH30 117 aa11.1□□□□□ -0.63
GABARAPL1-208ENST00000540424 Q5XG85 94 aa11.1□□□□□ -0.63
GABARAPL1-208ENST00000540424 Q8N2B8 174 aa11.1□□□□□ -0.63
GABARAPL1-208ENST00000540424 OPRPNQ99935 248 aaPredicted RBP11.1□□□□□ -0.63
GABARAPL1-208ENST00000540424 CYSTM1Q9H1C7 97 aa11.1□□□□□ -0.63
GABARAPL1-208ENST00000540424 SPG11Q96JI7 2443 aa11.1□□□□□ -0.63
GABARAPL1-208ENST00000540424 F5H697 171 aa11.09□□□□□ -0.63
GABARAPL1-208ENST00000540424 COX7A2LO14548 114 aa11.09□□□□□ -0.63
GABARAPL1-208ENST00000540424 OXTP01178 125 aa11.09□□□□□ -0.63
GABARAPL1-208ENST00000540424 IGKV3-20P01619 116 aa11.09□□□□□ -0.63
GABARAPL1-208ENST00000540424 C4orf26Q17RF5 130 aa11.09□□□□□ -0.63
GABARAPL1-208ENST00000540424 DEFB104AQ8WTQ1 72 aa11.09□□□□□ -0.63
GABARAPL1-208ENST00000540424 UPK3BQ9BT76 320 aa11.09□□□□□ -0.63
GABARAPL1-208ENST00000540424 ADARB2-AS1A8MUL3 147 aa11.08□□□□□ -0.64
GABARAPL1-208ENST00000540424 TIMM17BO60830 172 aa11.08□□□□□ -0.64
GABARAPL1-208ENST00000540424 NDUFA12Q9UI09 145 aa11.08□□□□□ -0.64
GABARAPL1-208ENST00000540424 INAFM2P0DMQ5 153 aa11.08□□□□□ -0.64
GABARAPL1-208ENST00000540424 DAZ2Q13117 558 aaKnown RBP11.08□□□□□ -0.64
GABARAPL1-208ENST00000540424 DAZ4Q86SG3 579 aaKnown RBP11.08□□□□□ -0.64
GABARAPL1-208ENST00000540424 SERP2Q8N6R1 65 aa11.08□□□□□ -0.64
GABARAPL1-208ENST00000540424 DAZ3Q9NR90 486 aaKnown RBP11.08□□□□□ -0.64
GABARAPL1-208ENST00000540424 PTPN13Q12923 2485 aa11.08□□□□□ -0.64
GABARAPL1-208ENST00000540424 TRAV12-2A0A075B6T6 113 aa11.07□□□□□ -0.64
GABARAPL1-208ENST00000540424 IGHV1-58A0A0C4DH39 117 aa11.07□□□□□ -0.64
GABARAPL1-208ENST00000540424 SPINK13Q1W4C9 94 aa11.07□□□□□ -0.64
GABARAPL1-208ENST00000540424 Q96MF0 132 aa11.07□□□□□ -0.64
GABARAPL1-208ENST00000540424 IGLV4-3A0A075B6K6 122 aa11.07□□□□□ -0.64
GABARAPL1-208ENST00000540424 A0A087WWL8 130 aa11.07□□□□□ -0.64
GABARAPL1-208ENST00000540424 KRTAP10-9P60411 292 aa11.07□□□□□ -0.64
GABARAPL1-208ENST00000540424 FAM222AQ5U5X8 452 aa11.07□□□□□ -0.64
GABARAPL1-208ENST00000540424 HRCT1Q6UXD1 115 aa11.07□□□□□ -0.64
GABARAPL1-208ENST00000540424 C20orf203Q8NBC4 194 aa11.06□□□□□ -0.64
GABARAPL1-208ENST00000540424 TMEM86BQ8N661 226 aa11.06□□□□□ -0.64
GABARAPL1-208ENST00000540424 VPS13CQ709C8 3753 aa11.05□□□□□ -0.64
GABARAPL1-208ENST00000540424 TIRAPP58753 221 aa11.05□□□□□ -0.64
GABARAPL1-208ENST00000540424 MRPS36P82909 103 aaKnown RBP11.05□□□□□ -0.64
GABARAPL1-208ENST00000540424 C4orf3Q8WVX3 66 aa11.05□□□□□ -0.64
GABARAPL1-208ENST00000540424 JPT2Q9H910 190 aa11.05□□□□□ -0.64
GABARAPL1-208ENST00000540424 BAHCC1Q9P281 2608 aa11.05□□□□□ -0.64
GABARAPL1-208ENST00000540424 BEAN1Q3B7T3 259 aa11.04□□□□□ -0.64
GABARAPL1-208ENST00000540424 FAM74A4Q5TZK3 123 aa11.04□□□□□ -0.64
GABARAPL1-208ENST00000540424 DSCR8Q96T75 97 aa11.04□□□□□ -0.64
GABARAPL1-208ENST00000540424 NPC2P61916 151 aa11.04□□□□□ -0.64
GABARAPL1-208ENST00000540424 ZFHX3Q15911 3703 aa11.04□□□□□ -0.64
GABARAPL1-208ENST00000540424 CELSR1Q9NYQ6 3014 aa11.03□□□□□ -0.64
GABARAPL1-208ENST00000540424 TRAV13-1A0A0B4J241 112 aa11.03□□□□□ -0.64
GABARAPL1-208ENST00000540424 BAALC-AS2P0C853 105 aa11.03□□□□□ -0.64
GABARAPL1-208ENST00000540424 SLURP1P55000 103 aa11.03□□□□□ -0.64
GABARAPL1-208ENST00000540424 UTP20O75691 2785 aaKnown RBP11.03□□□□□ -0.64
GABARAPL1-208ENST00000540424 VSIG2Q96IQ7 327 aa11.02□□□□□ -0.64
GABARAPL1-208ENST00000540424 C22orf24Q9Y442 160 aa11.02□□□□□ -0.64
GABARAPL1-208ENST00000540424 CSPG4Q6UVK1 2322 aa11.02□□□□□ -0.65
GABARAPL1-208ENST00000540424 HIST2H2BCQ6DN03 193 aa11.02□□□□□ -0.65
GABARAPL1-208ENST00000540424 PYGO1Q9Y3Y4 419 aa11.02□□□□□ -0.65
GABARAPL1-208ENST00000540424 A8MTW9 85 aa11.01□□□□□ -0.65
GABARAPL1-208ENST00000540424 M0QY20 66 aa11.01□□□□□ -0.65
GABARAPL1-208ENST00000540424 DEFB131AP59861 70 aa11.01□□□□□ -0.65
GABARAPL1-208ENST00000540424 Q6JHZ5 121 aa11.01□□□□□ -0.65
GABARAPL1-208ENST00000540424 DYNLRB2Q8TF09 96 aa11.01□□□□□ -0.65
GABARAPL1-208ENST00000540424 ANKRD17O75179 2603 aaKnown RBP11.01□□□□□ -0.65
GABARAPL1-208ENST00000540424 MUC4Q99102 2169 aa11.01□□□□□ -0.65
GABARAPL1-208ENST00000540424 DEFB136Q30KP8 78 aa11.01□□□□□ -0.65
GABARAPL1-208ENST00000540424 KHDC1LQ5JSQ8 128 aa11.01□□□□□ -0.65
GABARAPL1-208ENST00000540424 PRRC2AP48634 2157 aaKnown RBP11□□□□□ -0.65
GABARAPL1-208ENST00000540424 CR1P17927 2039 aa11□□□□□ -0.65
GABARAPL1-208ENST00000540424 NDUFC2-KCTD14E9PQ53 114 aa11□□□□□ -0.65
GABARAPL1-208ENST00000540424 KNCNA6PVL3 124 aa10.99□□□□□ -0.65
GABARAPL1-208ENST00000540424 C18orf65Q6ZTR6 163 aa10.99□□□□□ -0.65
GABARAPL1-208ENST00000540424 TINCRA0A1B0GVN0 87 aa10.98□□□□□ -0.65
GABARAPL1-208ENST00000540424 PIK3CD-AS1Q5SR53 167 aa10.98□□□□□ -0.65
GABARAPL1-208ENST00000540424 HECTD1Q9ULT8 2610 aa10.98□□□□□ -0.65
GABARAPL1-208ENST00000540424 CD28P10747 220 aa10.98□□□□□ -0.65
GABARAPL1-208ENST00000540424 MALP21145 153 aa10.98□□□□□ -0.65
GABARAPL1-208ENST00000540424 KRTAP1-3Q8IUG1 177 aa10.98□□□□□ -0.65
GABARAPL1-208ENST00000540424 ZNF415Q09FC8 603 aa10.97□□□□□ -0.65
GABARAPL1-208ENST00000540424 CELSR2Q9HCU4 2923 aa10.97□□□□□ -0.65
GABARAPL1-208ENST00000540424 CIRBPQ14011 172 aaKnown RBP10.96□□□□□ -0.65
GABARAPL1-208ENST00000540424 PRO0628Q9UI54 55 aa10.96□□□□□ -0.65
GABARAPL1-208ENST00000540424 NDUFA1O15239 70 aa10.96□□□□□ -0.66
GABARAPL1-208ENST00000540424 LINC00308Q8TCZ7 52 aa10.96□□□□□ -0.66
GABARAPL1-208ENST00000540424 COPS9Q8WXC6 57 aa10.96□□□□□ -0.66
GABARAPL1-208ENST00000540424 FAM104AQ969W3 186 aa10.96□□□□□ -0.66
GABARAPL1-208ENST00000540424 USP17L23D6RBM5 183 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms