RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 INSP01308 110 aa10.13□□□□□ -0.79
UBE3B-210ENST00000539599 IGHV3-33P01772 117 aa10.13□□□□□ -0.79
UBE3B-210ENST00000539599 MRPS36P82909 103 aaKnown RBP10.13□□□□□ -0.79
UBE3B-210ENST00000539599 A8MTW9 85 aa10.12□□□□□ -0.79
UBE3B-210ENST00000539599 CITED2Q99967 270 aaPredicted RBP10.12□□□□□ -0.79
UBE3B-210ENST00000539599 NDUFA12Q9UI09 145 aa10.12□□□□□ -0.79
UBE3B-210ENST00000539599 C1QTNF4Q9BXJ3 329 aa10.12□□□□□ -0.79
UBE3B-210ENST00000539599 STHQ8IWL8 128 aa10.11□□□□□ -0.79
UBE3B-210ENST00000539599 SIGMAR1Q99720 223 aa10.11□□□□□ -0.79
UBE3B-210ENST00000539599 C9JAW5 83 aa10.1□□□□□ -0.79
UBE3B-210ENST00000539599 PYGO1Q9Y3Y4 419 aa10.1□□□□□ -0.79
UBE3B-210ENST00000539599 IGHV1-58A0A0C4DH39 117 aa10.1□□□□□ -0.79
UBE3B-210ENST00000539599 ANKRD29Q8N6D5 301 aa10.1□□□□□ -0.79
UBE3B-210ENST00000539599 CCL24O00175 119 aa10.09□□□□□ -0.79
UBE3B-210ENST00000539599 RPL35AP18077 110 aaKnown RBP10.09□□□□□ -0.79
UBE3B-210ENST00000539599 VSIG2Q96IQ7 327 aa10.09□□□□□ -0.79
UBE3B-210ENST00000539599 HECTD1Q9ULT8 2610 aa10.09□□□□□ -0.79
UBE3B-210ENST00000539599 LOC100131303A0A0U1RQF7 123 aa10.09□□□□□ -0.79
UBE3B-210ENST00000539599 ERG28Q9UKR5 140 aa10.09□□□□□ -0.79
UBE3B-210ENST00000539599 TRAV13-1A0A0B4J241 112 aa10.09□□□□□ -0.79
UBE3B-210ENST00000539599 GAGE12JA6NER3 117 aa10.09□□□□□ -0.79
UBE3B-210ENST00000539599 GAGE4Q13068 117 aa10.09□□□□□ -0.79
UBE3B-210ENST00000539599 GAGE5Q13069 117 aa10.09□□□□□ -0.79
UBE3B-210ENST00000539599 GEMIN7Q9H840 131 aaKnown RBP10.09□□□□□ -0.79
UBE3B-210ENST00000539599 NOP10Q9NPE3 64 aaKnown RBP10.09□□□□□ -0.79
UBE3B-210ENST00000539599 CDIP1Q9H305 208 aa10.08□□□□□ -0.8
UBE3B-210ENST00000539599 UNC79Q9P2D8 2635 aa10.08□□□□□ -0.8
UBE3B-210ENST00000539599 J3QR89 54 aa10.08□□□□□ -0.8
UBE3B-210ENST00000539599 RS1O15537 224 aa10.08□□□□□ -0.8
UBE3B-210ENST00000539599 DGAT2L7PQ6IED9 249 aa10.08□□□□□ -0.8
UBE3B-210ENST00000539599 NTM-AS1Q6ZSK4 140 aa10.08□□□□□ -0.8
UBE3B-210ENST00000539599 SPATA25Q9BR10 227 aa10.08□□□□□ -0.8
UBE3B-210ENST00000539599 TRIAP1O43715 76 aa10.07□□□□□ -0.8
UBE3B-210ENST00000539599 HIVEP2P31629 2446 aa10.07□□□□□ -0.8
UBE3B-210ENST00000539599 EDA2RQ9HAV5 297 aa10.07□□□□□ -0.8
UBE3B-210ENST00000539599 TINCRA0A1B0GVN0 87 aa10.06□□□□□ -0.8
UBE3B-210ENST00000539599 MT-ATP8P03928 68 aa10.06□□□□□ -0.8
UBE3B-210ENST00000539599 BEAN1Q3B7T3 259 aa10.06□□□□□ -0.8
UBE3B-210ENST00000539599 TMEM101Q96IK0 257 aa10.06□□□□□ -0.8
UBE3B-210ENST00000539599 IGKV3OR2-268A0A0C4DH90 116 aa10.05□□□□□ -0.8
UBE3B-210ENST00000539599 SLC25A20O43772 301 aa10.05□□□□□ -0.8
UBE3B-210ENST00000539599 GIG44P09565 113 aaPredicted RBP10.05□□□□□ -0.8
UBE3B-210ENST00000539599 CLEC2BQ92478 149 aa10.05□□□□□ -0.8
UBE3B-210ENST00000539599 TEN1Q86WV5 123 aa10.05□□□□□ -0.8
UBE3B-210ENST00000539599 SPANXA1Q9NS26 97 aa10.05□□□□□ -0.8
UBE3B-210ENST00000539599 TRRAPQ9Y4A5 3859 aa10.04□□□□□ -0.8
UBE3B-210ENST00000539599 GAGE7O76087 117 aa10.04□□□□□ -0.8
UBE3B-210ENST00000539599 GAGE12FP0CL80 117 aa10.04□□□□□ -0.8
UBE3B-210ENST00000539599 GAGE12GP0CL81 117 aa10.04□□□□□ -0.8
UBE3B-210ENST00000539599 GAGE12IP0CL82 117 aa10.04□□□□□ -0.8
UBE3B-210ENST00000539599 A0A0B4J2C4 111 aa10.04□□□□□ -0.8
UBE3B-210ENST00000539599 XGP55808 180 aa10.04□□□□□ -0.8
UBE3B-210ENST00000539599 TENM1Q9UKZ4 2725 aa10.04□□□□□ -0.8
UBE3B-210ENST00000539599 LINC00242Q5T6M2 205 aa10.03□□□□□ -0.8
UBE3B-210ENST00000539599 SMR3AQ99954 134 aa10.03□□□□□ -0.8
UBE3B-210ENST00000539599 LINC01006Q8NI28 216 aa10.03□□□□□ -0.8
UBE3B-210ENST00000539599 Q9H8V8 135 aa10.03□□□□□ -0.8
UBE3B-210ENST00000539599 OTOGQ6ZRI0 2925 aa10.02□□□□□ -0.8
UBE3B-210ENST00000539599 TRBV20-1A0A075B6N2 111 aa10.02□□□□□ -0.81
UBE3B-210ENST00000539599 MIAQ16674 131 aa10.02□□□□□ -0.81
UBE3B-210ENST00000539599 LRRC75A-AS1Q8N1F1 130 aa10.02□□□□□ -0.81
UBE3B-210ENST00000539599 YAE1D1Q9NRH1 226 aa10.02□□□□□ -0.81
UBE3B-210ENST00000539599 LYRM7Q5U5X0 104 aa10.02□□□□□ -0.81
UBE3B-210ENST00000539599 ZFAND6Q6FIF0 208 aa10.02□□□□□ -0.81
UBE3B-210ENST00000539599 NTN5Q8WTR8 489 aaPredicted RBP10.02□□□□□ -0.81
UBE3B-210ENST00000539599 TEX49A0A1B0GTD5 131 aa10.01□□□□□ -0.81
UBE3B-210ENST00000539599 K7EQD1 137 aa10.01□□□□□ -0.81
UBE3B-210ENST00000539599 IL17DQ8TAD2 202 aa10.01□□□□□ -0.81
UBE3B-210ENST00000539599 PPDPFLQ8WWR9 84 aa10.01□□□□□ -0.81
UBE3B-210ENST00000539599 KRTAP1-1Q07627 177 aa10.01□□□□□ -0.81
UBE3B-210ENST00000539599 SBSPONQ8IVN8 264 aa10□□□□□ -0.81
UBE3B-210ENST00000539599 ICOSQ9Y6W8 199 aa10□□□□□ -0.81
UBE3B-210ENST00000539599 TRAV16A0A0A6YYK6 109 aaPredicted RBP10□□□□□ -0.81
UBE3B-210ENST00000539599 LINC01620Q4KN68 170 aa10□□□□□ -0.81
UBE3B-210ENST00000539599 TRGV2A0A075B6R0 118 aa9.99□□□□□ -0.81
UBE3B-210ENST00000539599 PLAC8L1A1L4L8 177 aa9.99□□□□□ -0.81
UBE3B-210ENST00000539599 RPL13AP40429 203 aaKnown RBP9.99□□□□□ -0.81
UBE3B-210ENST00000539599 ATP6V0E2Q8NHE4 81 aa9.99□□□□□ -0.81
UBE3B-210ENST00000539599 DNAJC30Q96LL9 226 aa9.99□□□□□ -0.81
UBE3B-210ENST00000539599 RPL36AP83881 106 aaKnown RBP9.99□□□□□ -0.81
UBE3B-210ENST00000539599 SOSTDC1Q6X4U4 206 aa9.99□□□□□ -0.81
UBE3B-210ENST00000539599 RPL36ALQ969Q0 106 aaKnown RBP9.99□□□□□ -0.81
UBE3B-210ENST00000539599 SPANXDQ9BXN6 97 aa9.98□□□□□ -0.81
UBE3B-210ENST00000539599 SPANXCQ9NY87 97 aa9.98□□□□□ -0.81
UBE3B-210ENST00000539599 SMIM1B2RUZ4 78 aa9.98□□□□□ -0.81
UBE3B-210ENST00000539599 PIK3CD-AS1Q5SR53 167 aa9.97□□□□□ -0.81
UBE3B-210ENST00000539599 CRYBA4P53673 196 aa9.97□□□□□ -0.81
UBE3B-210ENST00000539599 GAGE6Q13070 117 aa9.97□□□□□ -0.81
UBE3B-210ENST00000539599 SPATA3Q8NHX4 192 aa9.97□□□□□ -0.81
UBE3B-210ENST00000539599 ATXN8Q156A1 80 aa9.97□□□□□ -0.81
UBE3B-210ENST00000539599 NDUFA1O15239 70 aa9.96□□□□□ -0.82
UBE3B-210ENST00000539599 CDC42SE2Q9NRR3 84 aa9.96□□□□□ -0.82
UBE3B-210ENST00000539599 C19orf73Q9NVV2 129 aa9.96□□□□□ -0.82
UBE3B-210ENST00000539599 IGLV5-45A0A087WSX0 123 aa9.95□□□□□ -0.82
UBE3B-210ENST00000539599 LINC00308Q8TCZ7 52 aa9.95□□□□□ -0.82
UBE3B-210ENST00000539599 TRAV4A0A0B4J268 109 aa9.95□□□□□ -0.82
UBE3B-210ENST00000539599 TRBV30A0A0K0K1B3 111 aa9.95□□□□□ -0.82
UBE3B-210ENST00000539599 TIRAPP58753 221 aa9.95□□□□□ -0.82
UBE3B-210ENST00000539599 MEIG1Q5JSS6 88 aa9.95□□□□□ -0.82
UBE3B-210ENST00000539599 PRIMA1Q86XR5 153 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms