RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 CRLF1O75462 422 aa9.54□□□□□ -0.88
UBE3B-209ENST00000539584 GAGE7O76087 117 aa9.54□□□□□ -0.88
UBE3B-209ENST00000539584 PF4P02776 101 aa9.54□□□□□ -0.88
UBE3B-209ENST00000539584 GAGE12FP0CL80 117 aa9.54□□□□□ -0.88
UBE3B-209ENST00000539584 GAGE12GP0CL81 117 aa9.54□□□□□ -0.88
UBE3B-209ENST00000539584 GAGE12IP0CL82 117 aa9.54□□□□□ -0.88
UBE3B-209ENST00000539584 GAGE4Q13068 117 aa9.54□□□□□ -0.88
UBE3B-209ENST00000539584 SHISA2Q6UWI4 295 aa9.54□□□□□ -0.88
UBE3B-209ENST00000539584 IMUPQ9GZP8 106 aa9.54□□□□□ -0.88
UBE3B-209ENST00000539584 TRACP01848 142 aa9.53□□□□□ -0.88
UBE3B-209ENST00000539584 SMIM1B2RUZ4 78 aa9.53□□□□□ -0.88
UBE3B-209ENST00000539584 NPC2P61916 151 aa9.53□□□□□ -0.88
UBE3B-209ENST00000539584 TRBV7-7A0A0K0K1E9 115 aa9.52□□□□□ -0.89
UBE3B-209ENST00000539584 COX6A2Q02221 97 aa9.52□□□□□ -0.89
UBE3B-209ENST00000539584 DEFB136Q30KP8 78 aa9.52□□□□□ -0.89
UBE3B-209ENST00000539584 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.52□□□□□ -0.89
UBE3B-209ENST00000539584 NACAE9PAV3 2078 aa9.52□□□□□ -0.89
UBE3B-209ENST00000539584 K7EQD1 137 aa9.51□□□□□ -0.89
UBE3B-209ENST00000539584 SVIPQ8NHG7 77 aa9.51□□□□□ -0.89
UBE3B-209ENST00000539584 ZNF625Q96I27 306 aaPredicted RBP9.51□□□□□ -0.89
UBE3B-209ENST00000539584 PRM2P04554 102 aa9.51□□□□□ -0.89
UBE3B-209ENST00000539584 IGHV4-31P0DP07 118 aa9.51□□□□□ -0.89
UBE3B-209ENST00000539584 CMC4P56277 68 aaPredicted RBP9.51□□□□□ -0.89
UBE3B-209ENST00000539584 STHQ8IWL8 128 aa9.51□□□□□ -0.89
UBE3B-209ENST00000539584 TMEM86BQ8N661 226 aa9.51□□□□□ -0.89
UBE3B-209ENST00000539584 FAM222AQ5U5X8 452 aa9.5□□□□□ -0.89
UBE3B-209ENST00000539584 Q6ZSV7 163 aa9.5□□□□□ -0.89
UBE3B-209ENST00000539584 C18orf65Q6ZTR6 163 aa9.5□□□□□ -0.89
UBE3B-209ENST00000539584 PRIMA1Q86XR5 153 aa9.5□□□□□ -0.89
UBE3B-209ENST00000539584 CDC42SE2Q9NRR3 84 aa9.5□□□□□ -0.89
UBE3B-209ENST00000539584 DAND5Q8N907 189 aa9.49□□□□□ -0.89
UBE3B-209ENST00000539584 OVOL2Q9BRP0 275 aa9.49□□□□□ -0.89
UBE3B-209ENST00000539584 TRGV1A0A0A0MS02 117 aa9.49□□□□□ -0.89
UBE3B-209ENST00000539584 TRAV13-2A0A0B4J235 113 aa9.49□□□□□ -0.89
UBE3B-209ENST00000539584 MEIG1Q5JSS6 88 aa9.49□□□□□ -0.89
UBE3B-209ENST00000539584 F5H768 121 aa9.48□□□□□ -0.89
UBE3B-209ENST00000539584 C1orf158Q8N1D5 194 aa9.48□□□□□ -0.89
UBE3B-209ENST00000539584 HIST2H2BCQ6DN03 193 aa9.48□□□□□ -0.89
UBE3B-209ENST00000539584 HIST2H2BDQ6DRA6 164 aa9.48□□□□□ -0.89
UBE3B-209ENST00000539584 XCL2Q9UBD3 114 aa9.48□□□□□ -0.89
UBE3B-209ENST00000539584 LINC00694P0DN24 101 aa9.47□□□□□ -0.89
UBE3B-209ENST00000539584 ODF3L2Q3SX64 289 aa9.47□□□□□ -0.89
UBE3B-209ENST00000539584 LRRC75A-AS1Q8N1F1 130 aa9.47□□□□□ -0.89
UBE3B-209ENST00000539584 NRGNQ92686 78 aa9.47□□□□□ -0.89
UBE3B-209ENST00000539584 CSPG4Q6UVK1 2322 aa9.46□□□□□ -0.89
UBE3B-209ENST00000539584 TRAV13-1A0A0B4J241 112 aa9.46□□□□□ -0.89
UBE3B-209ENST00000539584 B5MCH6 92 aa9.46□□□□□ -0.89
UBE3B-209ENST00000539584 UBE2L6O14933 153 aa9.46□□□□□ -0.89
UBE3B-209ENST00000539584 NTM-AS1Q6ZSK4 140 aa9.46□□□□□ -0.89
UBE3B-209ENST00000539584 INAFM2P0DMQ5 153 aa9.46□□□□□ -0.9
UBE3B-209ENST00000539584 KHDC1LQ5JSQ8 128 aa9.46□□□□□ -0.9
UBE3B-209ENST00000539584 SOSTDC1Q6X4U4 206 aa9.46□□□□□ -0.9
UBE3B-209ENST00000539584 LINC00643Q86TS7 51 aa9.46□□□□□ -0.9
UBE3B-209ENST00000539584 TMEM243Q9BU79 118 aa9.46□□□□□ -0.9
UBE3B-209ENST00000539584 RPL28P46779 137 aaKnown RBP9.45□□□□□ -0.9
UBE3B-209ENST00000539584 SORL1Q92673 2214 aa9.45□□□□□ -0.9
UBE3B-209ENST00000539584 SDIM1Q6ZPB5 146 aa9.44□□□□□ -0.9
UBE3B-209ENST00000539584 TRBV6-4A0A1B0GX49 114 aa9.44□□□□□ -0.9
UBE3B-209ENST00000539584 ATP5G1P05496 136 aa9.44□□□□□ -0.9
UBE3B-209ENST00000539584 MAPK1IP1LQ8NDC0 245 aa9.44□□□□□ -0.9
UBE3B-209ENST00000539584 FAM110AQ9BQ89 295 aa9.44□□□□□ -0.9
UBE3B-209ENST00000539584 VPS13CQ709C8 3753 aa9.44□□□□□ -0.9
UBE3B-209ENST00000539584 DOPEY1Q5JWR5 2465 aa9.44□□□□□ -0.9
UBE3B-209ENST00000539584 BAALC-AS2P0C853 105 aa9.43□□□□□ -0.9
UBE3B-209ENST00000539584 C16orf74Q96GX8 76 aa9.43□□□□□ -0.9
UBE3B-209ENST00000539584 CELSR1Q9NYQ6 3014 aa9.43□□□□□ -0.9
UBE3B-209ENST00000539584 CRPP02741 224 aa9.42□□□□□ -0.9
UBE3B-209ENST00000539584 Q6ZTI0 123 aa9.42□□□□□ -0.9
UBE3B-209ENST00000539584 SS18L2Q9UHA2 77 aa9.42□□□□□ -0.9
UBE3B-209ENST00000539584 CCDC179H3BU77 68 aa9.41□□□□□ -0.9
UBE3B-209ENST00000539584 CXCL5P42830 114 aa9.41□□□□□ -0.9
UBE3B-209ENST00000539584 COX7B2Q8TF08 81 aa9.41□□□□□ -0.9
UBE3B-209ENST00000539584 CREBBPQ92793 2442 aa9.41□□□□□ -0.9
UBE3B-209ENST00000539584 H0YGX0 51 aa9.41□□□□□ -0.9
UBE3B-209ENST00000539584 NDUFA7O95182 113 aa9.41□□□□□ -0.9
UBE3B-209ENST00000539584 DEFB113Q30KQ7 82 aa9.41□□□□□ -0.9
UBE3B-209ENST00000539584 A0A0U1RRA0 63 aa9.4□□□□□ -0.9
UBE3B-209ENST00000539584 SPG11Q96JI7 2443 aa9.39□□□□□ -0.91
UBE3B-209ENST00000539584 IBA57-AS1B1ANH7 110 aa9.39□□□□□ -0.91
UBE3B-209ENST00000539584 CCL24O00175 119 aa9.39□□□□□ -0.91
UBE3B-209ENST00000539584 Q96MF0 132 aa9.39□□□□□ -0.91
UBE3B-209ENST00000539584 TMEM126AQ9H061 195 aa9.39□□□□□ -0.91
UBE3B-209ENST00000539584 NOP10Q9NPE3 64 aaKnown RBP9.39□□□□□ -0.91
UBE3B-209ENST00000539584 MALP21145 153 aa9.38□□□□□ -0.91
UBE3B-209ENST00000539584 SND1-IT1Q9HBX3 110 aa9.38□□□□□ -0.91
UBE3B-209ENST00000539584 NCOR2Q9Y618 2525 aa9.37□□□□□ -0.91
UBE3B-209ENST00000539584 TRGV2A0A075B6R0 118 aa9.37□□□□□ -0.91
UBE3B-209ENST00000539584 DNAL4O96015 105 aa9.37□□□□□ -0.91
UBE3B-209ENST00000539584 MIR7-3HGQ8N6C7 128 aa9.37□□□□□ -0.91
UBE3B-209ENST00000539584 A0A087WZ39 114 aa9.36□□□□□ -0.91
UBE3B-209ENST00000539584 TRBV6-8A0A0A6YYG3 113 aa9.36□□□□□ -0.91
UBE3B-209ENST00000539584 IGHV3OR16-9A0A0B4J2B5 98 aa9.36□□□□□ -0.91
UBE3B-209ENST00000539584 PLAC8L1A1L4L8 177 aa9.36□□□□□ -0.91
UBE3B-209ENST00000539584 FAM218AQ96MZ4 157 aa9.36□□□□□ -0.91
UBE3B-209ENST00000539584 C22orf24Q9Y442 160 aa9.36□□□□□ -0.91
UBE3B-209ENST00000539584 ITPR1Q14643 2758 aa9.35□□□□□ -0.91
UBE3B-209ENST00000539584 CHCHD5Q9BSY4 110 aa9.35□□□□□ -0.91
UBE3B-209ENST00000539584 IGKV2-28A0A075B6P5 120 aa9.34□□□□□ -0.91
UBE3B-209ENST00000539584 TRGV4A0A0C4DH28 118 aa9.34□□□□□ -0.91
UBE3B-209ENST00000539584 FAM236AA0A1B0GUQ0 79 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms