RNA–Protein interactions for RNA: ENST00000539396.5

STRN4-204, Transcript of striatin 4, humanhuman

TSL 2 BASIC

Gene STRN4, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN4-204ENST00000539396 GAGE12HA6NDE8 117 aa12.55□□□□□ -0.4
STRN4-204ENST00000539396 IGHV3-30-3P0DP02 117 aa12.55□□□□□ -0.4
STRN4-204ENST00000539396 CSNK1G2-AS1Q8NCQ2 148 aa12.55□□□□□ -0.4
STRN4-204ENST00000539396 TIMM21Q9BVV7 248 aa12.55□□□□□ -0.4
STRN4-204ENST00000539396 GEMIN7Q9H840 131 aaKnown RBP12.55□□□□□ -0.4
STRN4-204ENST00000539396 PGPEP1Q9NXJ5 209 aa12.55□□□□□ -0.4
STRN4-204ENST00000539396 OTOGQ6ZRI0 2925 aa12.55□□□□□ -0.4
STRN4-204ENST00000539396 RPL36AP83881 106 aaKnown RBP12.55□□□□□ -0.4
STRN4-204ENST00000539396 NDUFA11Q86Y39 141 aa12.55□□□□□ -0.4
STRN4-204ENST00000539396 RPL36ALQ969Q0 106 aaKnown RBP12.55□□□□□ -0.4
STRN4-204ENST00000539396 C16orf74Q96GX8 76 aa12.55□□□□□ -0.4
STRN4-204ENST00000539396 TINCRA0A1B0GVN0 87 aa12.54□□□□□ -0.4
STRN4-204ENST00000539396 APOMO95445 188 aa12.54□□□□□ -0.4
STRN4-204ENST00000539396 PF4P02776 101 aa12.54□□□□□ -0.4
STRN4-204ENST00000539396 GAGE7O76087 117 aa12.54□□□□□ -0.4
STRN4-204ENST00000539396 GAGE12FP0CL80 117 aa12.54□□□□□ -0.4
STRN4-204ENST00000539396 GAGE12GP0CL81 117 aa12.54□□□□□ -0.4
STRN4-204ENST00000539396 GAGE12IP0CL82 117 aa12.54□□□□□ -0.4
STRN4-204ENST00000539396 C1QTNF4Q9BXJ3 329 aa12.54□□□□□ -0.4
STRN4-204ENST00000539396 FN1P02751 2386 aaKnown RBP12.53□□□□□ -0.4
STRN4-204ENST00000539396 TRBV10-1A0A0K0K1A3 114 aa12.53□□□□□ -0.4
STRN4-204ENST00000539396 GAGE12JA6NER3 117 aa12.53□□□□□ -0.4
STRN4-204ENST00000539396 GAGE4Q13068 117 aa12.53□□□□□ -0.4
STRN4-204ENST00000539396 GAGE5Q13069 117 aa12.53□□□□□ -0.4
STRN4-204ENST00000539396 GAGE13Q4V321 117 aa12.53□□□□□ -0.4
STRN4-204ENST00000539396 DGAT2L7PQ6IED9 249 aa12.53□□□□□ -0.4
STRN4-204ENST00000539396 C10orf126Q8N4M7 172 aa12.53□□□□□ -0.4
STRN4-204ENST00000539396 TRGV2A0A075B6R0 118 aa12.53□□□□□ -0.4
STRN4-204ENST00000539396 LINC00694P0DN24 101 aa12.52□□□□□ -0.41
STRN4-204ENST00000539396 SPINK8P0C7L1 97 aa12.51□□□□□ -0.41
STRN4-204ENST00000539396 NTM-AS1Q6ZSK4 140 aa12.51□□□□□ -0.41
STRN4-204ENST00000539396 LINC00482Q8N8I6 264 aa12.51□□□□□ -0.41
STRN4-204ENST00000539396 IGHV1-58A0A0C4DH39 117 aa12.51□□□□□ -0.41
STRN4-204ENST00000539396 INAFM1C9JVW0 142 aa12.51□□□□□ -0.41
STRN4-204ENST00000539396 H3BMG7 143 aa12.51□□□□□ -0.41
STRN4-204ENST00000539396 UBE2D3P61077 147 aa12.51□□□□□ -0.41
STRN4-204ENST00000539396 UBE2D2P62837 147 aa12.51□□□□□ -0.41
STRN4-204ENST00000539396 A8MZ25 164 aa12.5□□□□□ -0.41
STRN4-204ENST00000539396 CFC1BP0CG36 223 aa12.5□□□□□ -0.41
STRN4-204ENST00000539396 CFC1P0CG37 223 aa12.5□□□□□ -0.41
STRN4-204ENST00000539396 DAZ4Q86SG3 579 aaKnown RBP12.5□□□□□ -0.41
STRN4-204ENST00000539396 DAZ3Q9NR90 486 aaKnown RBP12.5□□□□□ -0.41
STRN4-204ENST00000539396 A0A0J9YXY3 114 aa12.5□□□□□ -0.41
STRN4-204ENST00000539396 TSPAN13O95857 204 aa12.5□□□□□ -0.41
STRN4-204ENST00000539396 SFTA2Q6UW10 78 aa12.5□□□□□ -0.41
STRN4-204ENST00000539396 SS18L2Q9UHA2 77 aa12.5□□□□□ -0.41
STRN4-204ENST00000539396 VSIG2Q96IQ7 327 aa12.49□□□□□ -0.41
STRN4-204ENST00000539396 OVOL2Q9BRP0 275 aa12.49□□□□□ -0.41
STRN4-204ENST00000539396 CDKN2A-AS1Q9UH64 79 aa12.48□□□□□ -0.41
STRN4-204ENST00000539396 LOC100131303A0A0U1RQF7 123 aa12.48□□□□□ -0.41
STRN4-204ENST00000539396 VWFP04275 2813 aa12.48□□□□□ -0.41
STRN4-204ENST00000539396 MUSTN1Q8IVN3 82 aa12.47□□□□□ -0.41
STRN4-204ENST00000539396 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.47□□□□□ -0.41
STRN4-204ENST00000539396 NDUFA12Q9UI09 145 aa12.47□□□□□ -0.41
STRN4-204ENST00000539396 A4D1N5 150 aa12.47□□□□□ -0.41
STRN4-204ENST00000539396 COX6A2Q02221 97 aa12.46□□□□□ -0.41
STRN4-204ENST00000539396 SPATA3Q8NHX4 192 aa12.46□□□□□ -0.41
STRN4-204ENST00000539396 SPATA25Q9BR10 227 aa12.46□□□□□ -0.41
STRN4-204ENST00000539396 LOC107984156A0A0G2JMH3 177 aa12.46□□□□□ -0.42
STRN4-204ENST00000539396 TIRAPP58753 221 aa12.46□□□□□ -0.42
STRN4-204ENST00000539396 WFDC2Q14508 124 aa12.46□□□□□ -0.42
STRN4-204ENST00000539396 ARL17AQ8IVW1 177 aa12.46□□□□□ -0.42
STRN4-204ENST00000539396 NSD1Q96L73 2696 aaPredicted RBP12.46□□□□□ -0.42
STRN4-204ENST00000539396 TRGV4A0A0C4DH28 118 aa12.45□□□□□ -0.42
STRN4-204ENST00000539396 SBSPONQ8IVN8 264 aa12.45□□□□□ -0.42
STRN4-204ENST00000539396 MTURNQ8N3F0 131 aa12.45□□□□□ -0.42
STRN4-204ENST00000539396 LITAFQ99732 161 aa12.44□□□□□ -0.42
STRN4-204ENST00000539396 IGLV5-45A0A087WSX0 123 aa12.44□□□□□ -0.42
STRN4-204ENST00000539396 TRBV6-4A0A1B0GX49 114 aa12.44□□□□□ -0.42
STRN4-204ENST00000539396 F8W1H4 67 aa12.44□□□□□ -0.42
STRN4-204ENST00000539396 LINC00242Q5T6M2 205 aa12.44□□□□□ -0.42
STRN4-204ENST00000539396 PRO1854Q9UHT4 67 aa12.44□□□□□ -0.42
STRN4-204ENST00000539396 TRAV13-1A0A0B4J241 112 aa12.43□□□□□ -0.42
STRN4-204ENST00000539396 EIF4EBP3O60516 100 aaPredicted RBP12.43□□□□□ -0.42
STRN4-204ENST00000539396 HERV-K104P63124 156 aa12.43□□□□□ -0.42
STRN4-204ENST00000539396 CSDC2Q9Y534 153 aaKnown RBP12.43□□□□□ -0.42
STRN4-204ENST00000539396 ADAMTSL4-AS1Q5T5F5 129 aa12.43□□□□□ -0.42
STRN4-204ENST00000539396 CRLF1O75462 422 aa12.42□□□□□ -0.42
STRN4-204ENST00000539396 TMEM101Q96IK0 257 aa12.42□□□□□ -0.42
STRN4-204ENST00000539396 J3QR89 54 aa12.42□□□□□ -0.42
STRN4-204ENST00000539396 PRSS2P07478 247 aa12.42□□□□□ -0.42
STRN4-204ENST00000539396 FHL2Q14192 279 aa12.42□□□□□ -0.42
STRN4-204ENST00000539396 TMEM243Q9BU79 118 aa12.42□□□□□ -0.42
STRN4-204ENST00000539396 CDC42SE2Q9NRR3 84 aa12.42□□□□□ -0.42
STRN4-204ENST00000539396 ZFAND6Q6FIF0 208 aa12.41□□□□□ -0.42
STRN4-204ENST00000539396 TENM1Q9UKZ4 2725 aa12.41□□□□□ -0.42
STRN4-204ENST00000539396 UBE2L6O14933 153 aa12.41□□□□□ -0.42
STRN4-204ENST00000539396 DEFB130BP0DP73 79 aa12.41□□□□□ -0.42
STRN4-204ENST00000539396 DEFB130AP0DP74 79 aa12.41□□□□□ -0.42
STRN4-204ENST00000539396 PSMB2P49721 201 aa12.41□□□□□ -0.42
STRN4-204ENST00000539396 HERVK_113P63121 156 aa12.41□□□□□ -0.42
STRN4-204ENST00000539396 PRO0461Q9UI25 63 aa12.41□□□□□ -0.42
STRN4-204ENST00000539396 HIVEP1P15822 2718 aa12.41□□□□□ -0.42
STRN4-204ENST00000539396 NBEAL2Q6ZNJ1 2754 aa12.41□□□□□ -0.42
STRN4-204ENST00000539396 SH2D6Q7Z4S9 175 aa12.39□□□□□ -0.43
STRN4-204ENST00000539396 H7C2G1 150 aa12.38□□□□□ -0.43
STRN4-204ENST00000539396 RNF183Q96D59 192 aa12.38□□□□□ -0.43
STRN4-204ENST00000539396 A0A0B4J2C4 111 aa12.38□□□□□ -0.43
STRN4-204ENST00000539396 IGHV3-33P01772 117 aa12.38□□□□□ -0.43
STRN4-204ENST00000539396 ETDBQ3ZM63 59 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms