RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 A0A0B4J2C4 111 aa8.63□□□□□ -1.03
CPNE8-203ENST00000538596 CDKN2A-AS1Q9UH64 79 aa8.63□□□□□ -1.03
CPNE8-203ENST00000538596 TINCRA0A1B0GVN0 87 aa8.62□□□□□ -1.03
CPNE8-203ENST00000538596 NDUFA7O95182 113 aa8.62□□□□□ -1.03
CPNE8-203ENST00000538596 PDZD2O15018 2839 aa8.62□□□□□ -1.03
CPNE8-203ENST00000538596 FASNP49327 2511 aaKnown RBP8.62□□□□□ -1.03
CPNE8-203ENST00000538596 PLA2G2AP14555 144 aa8.62□□□□□ -1.03
CPNE8-203ENST00000538596 SBSPONQ8IVN8 264 aa8.62□□□□□ -1.03
CPNE8-203ENST00000538596 SPANXA1Q9NS26 97 aa8.62□□□□□ -1.03
CPNE8-203ENST00000538596 TRGV1A0A0A0MS02 117 aa8.61□□□□□ -1.03
CPNE8-203ENST00000538596 COX6A2Q02221 97 aa8.61□□□□□ -1.03
CPNE8-203ENST00000538596 BEAN1Q3B7T3 259 aa8.61□□□□□ -1.03
CPNE8-203ENST00000538596 KRTAP1-3Q8IUG1 177 aa8.61□□□□□ -1.03
CPNE8-203ENST00000538596 C1orf158Q8N1D5 194 aa8.61□□□□□ -1.03
CPNE8-203ENST00000538596 PPDPFLQ8WWR9 84 aa8.61□□□□□ -1.03
CPNE8-203ENST00000538596 RS1O15537 224 aa8.61□□□□□ -1.03
CPNE8-203ENST00000538596 SLC25A20O43772 301 aa8.61□□□□□ -1.03
CPNE8-203ENST00000538596 GEMIN7Q9H840 131 aaKnown RBP8.61□□□□□ -1.03
CPNE8-203ENST00000538596 TRIAP1O43715 76 aa8.6□□□□□ -1.03
CPNE8-203ENST00000538596 MT-ATP8P03928 68 aa8.6□□□□□ -1.03
CPNE8-203ENST00000538596 LINC00694P0DN24 101 aa8.6□□□□□ -1.03
CPNE8-203ENST00000538596 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.6□□□□□ -1.03
CPNE8-203ENST00000538596 CRYBA4P53673 196 aa8.6□□□□□ -1.03
CPNE8-203ENST00000538596 PIK3CD-AS1Q5SR53 167 aa8.6□□□□□ -1.03
CPNE8-203ENST00000538596 STHQ8IWL8 128 aa8.6□□□□□ -1.03
CPNE8-203ENST00000538596 UNC79Q9P2D8 2635 aa8.59□□□□□ -1.03
CPNE8-203ENST00000538596 XGP55808 180 aa8.59□□□□□ -1.03
CPNE8-203ENST00000538596 Q6ZTI0 123 aa8.59□□□□□ -1.03
CPNE8-203ENST00000538596 DGAT2L7PQ6IED9 249 aa8.59□□□□□ -1.04
CPNE8-203ENST00000538596 WFDC11Q8NEX6 87 aa8.59□□□□□ -1.04
CPNE8-203ENST00000538596 ZNF625Q96I27 306 aaPredicted RBP8.59□□□□□ -1.04
CPNE8-203ENST00000538596 A0A0U1RRA0 63 aa8.58□□□□□ -1.04
CPNE8-203ENST00000538596 DNAJC9-AS1A6NH13 148 aa8.58□□□□□ -1.04
CPNE8-203ENST00000538596 J3QKU1 62 aa8.58□□□□□ -1.04
CPNE8-203ENST00000538596 SCGB1A1P11684 91 aa8.58□□□□□ -1.04
CPNE8-203ENST00000538596 TMEM101Q96IK0 257 aa8.58□□□□□ -1.04
CPNE8-203ENST00000538596 ESM1Q9NQ30 184 aa8.58□□□□□ -1.04
CPNE8-203ENST00000538596 MIAQ16674 131 aa8.58□□□□□ -1.04
CPNE8-203ENST00000538596 DNAJC30Q96LL9 226 aa8.58□□□□□ -1.04
CPNE8-203ENST00000538596 WFDC10AQ9H1F0 79 aa8.58□□□□□ -1.04
CPNE8-203ENST00000538596 ZFAND6Q6FIF0 208 aa8.57□□□□□ -1.04
CPNE8-203ENST00000538596 SPANXDQ9BXN6 97 aa8.57□□□□□ -1.04
CPNE8-203ENST00000538596 SPANXCQ9NY87 97 aa8.57□□□□□ -1.04
CPNE8-203ENST00000538596 NOTCH2Q04721 2471 aa8.57□□□□□ -1.04
CPNE8-203ENST00000538596 CCL24O00175 119 aa8.56□□□□□ -1.04
CPNE8-203ENST00000538596 LINC01620Q4KN68 170 aa8.56□□□□□ -1.04
CPNE8-203ENST00000538596 NTM-AS1Q6ZSK4 140 aa8.56□□□□□ -1.04
CPNE8-203ENST00000538596 TRAV13-1A0A0B4J241 112 aa8.56□□□□□ -1.04
CPNE8-203ENST00000538596 LINC00242Q5T6M2 205 aa8.56□□□□□ -1.04
CPNE8-203ENST00000538596 NTN5Q8WTR8 489 aaPredicted RBP8.56□□□□□ -1.04
CPNE8-203ENST00000538596 ICOSQ9Y6W8 199 aa8.56□□□□□ -1.04
CPNE8-203ENST00000538596 ATXN8Q156A1 80 aa8.55□□□□□ -1.04
CPNE8-203ENST00000538596 CLEC2BQ92478 149 aa8.55□□□□□ -1.04
CPNE8-203ENST00000538596 CITED2Q99967 270 aaPredicted RBP8.55□□□□□ -1.04
CPNE8-203ENST00000538596 TRBV30A0A0K0K1B3 111 aa8.55□□□□□ -1.04
CPNE8-203ENST00000538596 GAGE12JA6NER3 117 aa8.55□□□□□ -1.04
CPNE8-203ENST00000538596 GAGE4Q13068 117 aa8.55□□□□□ -1.04
CPNE8-203ENST00000538596 GAGE5Q13069 117 aa8.55□□□□□ -1.04
CPNE8-203ENST00000538596 NOP10Q9NPE3 64 aaKnown RBP8.55□□□□□ -1.04
CPNE8-203ENST00000538596 TEX49A0A1B0GTD5 131 aa8.55□□□□□ -1.04
CPNE8-203ENST00000538596 LRRC75A-AS1Q8N1F1 130 aa8.55□□□□□ -1.04
CPNE8-203ENST00000538596 IL17DQ8TAD2 202 aa8.55□□□□□ -1.04
CPNE8-203ENST00000538596 Q9H8V8 135 aa8.55□□□□□ -1.04
CPNE8-203ENST00000538596 FN1P02751 2386 aaKnown RBP8.54□□□□□ -1.04
CPNE8-203ENST00000538596 IGLV5-45A0A087WSX0 123 aa8.54□□□□□ -1.04
CPNE8-203ENST00000538596 TIRAPP58753 221 aa8.54□□□□□ -1.04
CPNE8-203ENST00000538596 NBEAL2Q6ZNJ1 2754 aa8.53□□□□□ -1.04
CPNE8-203ENST00000538596 K7EQD1 137 aa8.53□□□□□ -1.04
CPNE8-203ENST00000538596 ANK3Q12955 4377 aaKnown RBP8.53□□□□□ -1.04
CPNE8-203ENST00000538596 LOC100131303A0A0U1RQF7 123 aa8.53□□□□□ -1.04
CPNE8-203ENST00000538596 NDUFA1O15239 70 aa8.53□□□□□ -1.04
CPNE8-203ENST00000538596 GIG44P09565 113 aaPredicted RBP8.53□□□□□ -1.04
CPNE8-203ENST00000538596 RPL13AP40429 203 aaKnown RBP8.53□□□□□ -1.04
CPNE8-203ENST00000538596 RPL35AP18077 110 aaKnown RBP8.52□□□□□ -1.04
CPNE8-203ENST00000538596 RPL36AP83881 106 aaKnown RBP8.52□□□□□ -1.04
CPNE8-203ENST00000538596 RPL36ALQ969Q0 106 aaKnown RBP8.52□□□□□ -1.04
CPNE8-203ENST00000538596 CKS1BP61024 79 aa8.52□□□□□ -1.05
CPNE8-203ENST00000538596 SMIM1B2RUZ4 78 aa8.51□□□□□ -1.05
CPNE8-203ENST00000538596 TRAV25A0A0B4J276 109 aa8.51□□□□□ -1.05
CPNE8-203ENST00000538596 IGLV5-39A0A0G2JS06 123 aa8.51□□□□□ -1.05
CPNE8-203ENST00000538596 H7C423 109 aa8.51□□□□□ -1.05
CPNE8-203ENST00000538596 GAGE7O76087 117 aa8.51□□□□□ -1.05
CPNE8-203ENST00000538596 GAGE12FP0CL80 117 aa8.51□□□□□ -1.05
CPNE8-203ENST00000538596 GAGE12GP0CL81 117 aa8.51□□□□□ -1.05
CPNE8-203ENST00000538596 GAGE12IP0CL82 117 aa8.51□□□□□ -1.05
CPNE8-203ENST00000538596 HERVK_113P63121 156 aa8.51□□□□□ -1.05
CPNE8-203ENST00000538596 CLUHP3Q96NS8 147 aa8.51□□□□□ -1.05
CPNE8-203ENST00000538596 TRBV10-2A0A0K0K1G8 114 aa8.51□□□□□ -1.05
CPNE8-203ENST00000538596 TMEM86BQ8N661 226 aa8.51□□□□□ -1.05
CPNE8-203ENST00000538596 CIDEAO60543 219 aa8.5□□□□□ -1.05
CPNE8-203ENST00000538596 SOSTDC1Q6X4U4 206 aa8.5□□□□□ -1.05
CPNE8-203ENST00000538596 LINC00308Q8TCZ7 52 aa8.5□□□□□ -1.05
CPNE8-203ENST00000538596 C2orf82Q6UX34 121 aa8.5□□□□□ -1.05
CPNE8-203ENST00000538596 YAE1D1Q9NRH1 226 aa8.5□□□□□ -1.05
CPNE8-203ENST00000538596 CDC42SE2Q9NRR3 84 aa8.5□□□□□ -1.05
CPNE8-203ENST00000538596 TRAV4A0A0B4J268 109 aa8.49□□□□□ -1.05
CPNE8-203ENST00000538596 PLAC8L1A1L4L8 177 aa8.49□□□□□ -1.05
CPNE8-203ENST00000538596 TIMM17BO60830 172 aa8.49□□□□□ -1.05
CPNE8-203ENST00000538596 A0A1B0GV72 72 aa8.49□□□□□ -1.05
CPNE8-203ENST00000538596 M0QXV9 152 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms