RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 Q8N2B8 174 aa6.29□□□□□ -1.4
UBE3B-208ENST00000538070 NDUFA12Q9UI09 145 aa6.29□□□□□ -1.4
UBE3B-208ENST00000538070 UBE2L6O14933 153 aa6.29□□□□□ -1.4
UBE3B-208ENST00000538070 LINC00694P0DN24 101 aa6.29□□□□□ -1.4
UBE3B-208ENST00000538070 RPL36AP83881 106 aaKnown RBP6.29□□□□□ -1.4
UBE3B-208ENST00000538070 TAL2Q16559 108 aa6.29□□□□□ -1.4
UBE3B-208ENST00000538070 C11orf72Q8NBR9 251 aa6.29□□□□□ -1.4
UBE3B-208ENST00000538070 RPL36ALQ969Q0 106 aaKnown RBP6.29□□□□□ -1.4
UBE3B-208ENST00000538070 HIVEP1P15822 2718 aa6.28□□□□□ -1.4
UBE3B-208ENST00000538070 TMEM223A0PJW6 202 aa6.28□□□□□ -1.4
UBE3B-208ENST00000538070 TSPAN13O95857 204 aa6.28□□□□□ -1.4
UBE3B-208ENST00000538070 SHISA2Q6UWI4 295 aa6.28□□□□□ -1.4
UBE3B-208ENST00000538070 C11orf68Q9H3H3 251 aaKnown RBP6.28□□□□□ -1.4
UBE3B-208ENST00000538070 CDKN2A-AS1Q9UH64 79 aa6.28□□□□□ -1.4
UBE3B-208ENST00000538070 TMEM238C9JI98 176 aa6.28□□□□□ -1.4
UBE3B-208ENST00000538070 INSL3P51460 131 aa6.28□□□□□ -1.4
UBE3B-208ENST00000538070 GAGE6Q13070 117 aa6.28□□□□□ -1.4
UBE3B-208ENST00000538070 SLC25A29Q8N8R3 303 aa6.28□□□□□ -1.4
UBE3B-208ENST00000538070 LINC00482Q8N8I6 264 aa6.28□□□□□ -1.4
UBE3B-208ENST00000538070 GTSF1LQ9H1H1 148 aa6.28□□□□□ -1.4
UBE3B-208ENST00000538070 LEPROTO15243 131 aa6.27□□□□□ -1.41
UBE3B-208ENST00000538070 CFC1BP0CG36 223 aa6.27□□□□□ -1.41
UBE3B-208ENST00000538070 CFC1P0CG37 223 aa6.27□□□□□ -1.41
UBE3B-208ENST00000538070 RPL32P62910 135 aaKnown RBP6.27□□□□□ -1.41
UBE3B-208ENST00000538070 CHCHD7Q9BUK0 85 aa6.27□□□□□ -1.41
UBE3B-208ENST00000538070 MAST4O15021 2626 aa6.27□□□□□ -1.41
UBE3B-208ENST00000538070 NDUFA11Q86Y39 141 aa6.27□□□□□ -1.41
UBE3B-208ENST00000538070 C10orf126Q8N4M7 172 aa6.27□□□□□ -1.41
UBE3B-208ENST00000538070 INAFM1C9JVW0 142 aa6.27□□□□□ -1.41
UBE3B-208ENST00000538070 TMEM262E9PQX1 116 aa6.27□□□□□ -1.41
UBE3B-208ENST00000538070 MEIG1Q5JSS6 88 aa6.27□□□□□ -1.41
UBE3B-208ENST00000538070 CLPSL2Q6UWE3 100 aa6.27□□□□□ -1.41
UBE3B-208ENST00000538070 CHCHD5Q9BSY4 110 aa6.27□□□□□ -1.41
UBE3B-208ENST00000538070 IGHV3-30P01768 117 aa6.26□□□□□ -1.41
UBE3B-208ENST00000538070 IGHV3-30-5P0DP03 117 aa6.26□□□□□ -1.41
UBE3B-208ENST00000538070 HTN3P15516 51 aa6.26□□□□□ -1.41
UBE3B-208ENST00000538070 UBE2D4Q9Y2X8 147 aa6.26□□□□□ -1.41
UBE3B-208ENST00000538070 NSD1Q96L73 2696 aaPredicted RBP6.26□□□□□ -1.41
UBE3B-208ENST00000538070 A0A0J9YXY3 114 aa6.26□□□□□ -1.41
UBE3B-208ENST00000538070 COX6A2Q02221 97 aa6.26□□□□□ -1.41
UBE3B-208ENST00000538070 NFE4Q86UQ8 179 aa6.26□□□□□ -1.41
UBE3B-208ENST00000538070 TEX29Q8N6K0 151 aa6.26□□□□□ -1.41
UBE3B-208ENST00000538070 TMEM86BQ8N661 226 aa6.26□□□□□ -1.41
UBE3B-208ENST00000538070 PRO1854Q9UHT4 67 aa6.26□□□□□ -1.41
UBE3B-208ENST00000538070 ERG28Q9UKR5 140 aa6.26□□□□□ -1.41
UBE3B-208ENST00000538070 STAB1Q9NY15 2570 aa6.25□□□□□ -1.41
UBE3B-208ENST00000538070 KRTAP1-1Q07627 177 aa6.25□□□□□ -1.41
UBE3B-208ENST00000538070 NOTCH1P46531 2555 aa6.25□□□□□ -1.41
UBE3B-208ENST00000538070 K7EQD1 137 aa6.25□□□□□ -1.41
UBE3B-208ENST00000538070 LY6G6DO95868 133 aa6.25□□□□□ -1.41
UBE3B-208ENST00000538070 SMAGPQ0VAQ4 97 aa6.25□□□□□ -1.41
UBE3B-208ENST00000538070 ADAMTSL4-AS1Q5T5F5 129 aa6.25□□□□□ -1.41
UBE3B-208ENST00000538070 RS1O15537 224 aa6.24□□□□□ -1.41
UBE3B-208ENST00000538070 CRLF1O75462 422 aa6.24□□□□□ -1.41
UBE3B-208ENST00000538070 TCL1BO95988 128 aa6.24□□□□□ -1.41
UBE3B-208ENST00000538070 SPATA3Q8NHX4 192 aa6.24□□□□□ -1.41
UBE3B-208ENST00000538070 Q9H8V8 135 aa6.24□□□□□ -1.41
UBE3B-208ENST00000538070 C9JAW5 83 aa6.24□□□□□ -1.41
UBE3B-208ENST00000538070 TMEM263Q8WUH6 116 aaKnown RBP6.24□□□□□ -1.41
UBE3B-208ENST00000538070 G3V4G9 280 aa6.23□□□□□ -1.41
UBE3B-208ENST00000538070 RNASE1P07998 156 aaKnown RBP6.23□□□□□ -1.41
UBE3B-208ENST00000538070 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.23□□□□□ -1.41
UBE3B-208ENST00000538070 PRIMA1Q86XR5 153 aa6.23□□□□□ -1.41
UBE3B-208ENST00000538070 SPANXA1Q9NS26 97 aa6.23□□□□□ -1.41
UBE3B-208ENST00000538070 TRAV25A0A0B4J276 109 aa6.23□□□□□ -1.41
UBE3B-208ENST00000538070 IGHV1-58A0A0C4DH39 117 aa6.23□□□□□ -1.41
UBE3B-208ENST00000538070 FHL3Q13643 280 aa6.23□□□□□ -1.41
UBE3B-208ENST00000538070 NTM-AS1Q6ZSK4 140 aa6.23□□□□□ -1.41
UBE3B-208ENST00000538070 TMEM101Q96IK0 257 aa6.23□□□□□ -1.41
UBE3B-208ENST00000538070 AMELXQ99217 191 aa6.23□□□□□ -1.41
UBE3B-208ENST00000538070 F8W1H4 67 aa6.22□□□□□ -1.41
UBE3B-208ENST00000538070 J3QR89 54 aa6.22□□□□□ -1.41
UBE3B-208ENST00000538070 UBE2D1P51668 147 aa6.22□□□□□ -1.41
UBE3B-208ENST00000538070 FAM104AQ969W3 186 aa6.22□□□□□ -1.41
UBE3B-208ENST00000538070 EIF4EBP3O60516 100 aaPredicted RBP6.22□□□□□ -1.41
UBE3B-208ENST00000538070 DEFB135Q30KP9 77 aa6.22□□□□□ -1.41
UBE3B-208ENST00000538070 VSIG2Q96IQ7 327 aa6.22□□□□□ -1.41
UBE3B-208ENST00000538070 GIG44P09565 113 aaPredicted RBP6.22□□□□□ -1.41
UBE3B-208ENST00000538070 C5orf38Q86SI9 138 aa6.22□□□□□ -1.41
UBE3B-208ENST00000538070 TMEM243Q9BU79 118 aa6.22□□□□□ -1.41
UBE3B-208ENST00000538070 SPANXB1Q9NS25 103 aaPredicted RBP6.22□□□□□ -1.41
UBE3B-208ENST00000538070 HILS1P60008 231 aa6.21□□□□□ -1.41
UBE3B-208ENST00000538070 MRPS36P82909 103 aaKnown RBP6.21□□□□□ -1.41
UBE3B-208ENST00000538070 TRRAPQ9Y4A5 3859 aa6.21□□□□□ -1.41
UBE3B-208ENST00000538070 IGLV1-51P01701 117 aa6.21□□□□□ -1.42
UBE3B-208ENST00000538070 KRTAP10-3P60369 221 aa6.21□□□□□ -1.42
UBE3B-208ENST00000538070 BEAN1Q3B7T3 259 aa6.21□□□□□ -1.42
UBE3B-208ENST00000538070 PYGO1Q9Y3Y4 419 aa6.21□□□□□ -1.42
UBE3B-208ENST00000538070 TINCRA0A1B0GVN0 87 aa6.2□□□□□ -1.42
UBE3B-208ENST00000538070 CLEC2BQ92478 149 aa6.2□□□□□ -1.42
UBE3B-208ENST00000538070 DNAJC30Q96LL9 226 aa6.2□□□□□ -1.42
UBE3B-208ENST00000538070 TRAV4A0A0B4J268 109 aa6.2□□□□□ -1.42
UBE3B-208ENST00000538070 PFN2P35080 140 aa6.2□□□□□ -1.42
UBE3B-208ENST00000538070 LINC00242Q5T6M2 205 aa6.2□□□□□ -1.42
UBE3B-208ENST00000538070 LYRM7Q5U5X0 104 aa6.2□□□□□ -1.42
UBE3B-208ENST00000538070 C1QTNF4Q9BXJ3 329 aa6.2□□□□□ -1.42
UBE3B-208ENST00000538070 CIRBPQ14011 172 aaKnown RBP6.2□□□□□ -1.42
UBE3B-208ENST00000538070 C16orf74Q96GX8 76 aa6.2□□□□□ -1.42
UBE3B-208ENST00000538070 IGHV3-33P01772 117 aa6.19□□□□□ -1.42
UBE3B-208ENST00000538070 GYPEP15421 78 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms