RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 OPRPNQ99935 248 aaPredicted RBP10.72□□□□□ -0.69
SFSWAP-206ENST00000537582 MAP1LC3CQ9BXW4 147 aa10.72□□□□□ -0.69
SFSWAP-206ENST00000537582 CYSLTR1Q9Y271 337 aa10.72□□□□□ -0.69
SFSWAP-206ENST00000537582 TIRAPP58753 221 aa10.71□□□□□ -0.69
SFSWAP-206ENST00000537582 TMEM97Q5BJF2 176 aa10.71□□□□□ -0.69
SFSWAP-206ENST00000537582 UBE2D4Q9Y2X8 147 aa10.71□□□□□ -0.69
SFSWAP-206ENST00000537582 FGF6P10767 208 aa10.7□□□□□ -0.7
SFSWAP-206ENST00000537582 LINC00469Q8N7U9 141 aa10.7□□□□□ -0.7
SFSWAP-206ENST00000537582 FAM104AQ969W3 186 aa10.7□□□□□ -0.7
SFSWAP-206ENST00000537582 UBE2L6O14933 153 aa10.69□□□□□ -0.7
SFSWAP-206ENST00000537582 MPV17L2Q567V2 206 aa10.69□□□□□ -0.7
SFSWAP-206ENST00000537582 RNASE13Q5GAN3 156 aaKnown RBP10.69□□□□□ -0.7
SFSWAP-206ENST00000537582 ZC2HC1BQ5TFG8 222 aa10.69□□□□□ -0.7
SFSWAP-206ENST00000537582 LINC01545Q5VT33 79 aa10.69□□□□□ -0.7
SFSWAP-206ENST00000537582 ATOH7Q8N100 152 aa10.69□□□□□ -0.7
SFSWAP-206ENST00000537582 LYSTQ99698 3801 aa10.69□□□□□ -0.7
SFSWAP-206ENST00000537582 IGLV4-60A0A075B6I1 120 aa10.69□□□□□ -0.7
SFSWAP-206ENST00000537582 IGIPA6NJ69 53 aa10.69□□□□□ -0.7
SFSWAP-206ENST00000537582 TMEM262E9PQX1 116 aa10.69□□□□□ -0.7
SFSWAP-206ENST00000537582 SCGB3A1Q96QR1 104 aa10.69□□□□□ -0.7
SFSWAP-206ENST00000537582 HNRNPA3P51991 378 aaKnown RBP10.68□□□□□ -0.7
SFSWAP-206ENST00000537582 CCL18P55774 89 aa10.68□□□□□ -0.7
SFSWAP-206ENST00000537582 CASC10Q5T4H9 136 aa10.68□□□□□ -0.7
SFSWAP-206ENST00000537582 Q6ZUT4 128 aa10.68□□□□□ -0.7
SFSWAP-206ENST00000537582 MRPS16Q9Y3D3 137 aaKnown RBP10.68□□□□□ -0.7
SFSWAP-206ENST00000537582 TRAV8-6A0A0B4J262 113 aa10.67□□□□□ -0.7
SFSWAP-206ENST00000537582 RBX1P62877 108 aa10.67□□□□□ -0.7
SFSWAP-206ENST00000537582 MAJINQ3KP22 176 aa10.67□□□□□ -0.7
SFSWAP-206ENST00000537582 Q6ZN92 141 aa10.67□□□□□ -0.7
SFSWAP-206ENST00000537582 IGLV4-3A0A075B6K6 122 aa10.66□□□□□ -0.7
SFSWAP-206ENST00000537582 IGHV3-30P01768 117 aa10.66□□□□□ -0.7
SFSWAP-206ENST00000537582 IGHV3-33P01772 117 aa10.66□□□□□ -0.7
SFSWAP-206ENST00000537582 IGHV3-30-3P0DP02 117 aa10.66□□□□□ -0.7
SFSWAP-206ENST00000537582 IGHV3-30-5P0DP03 117 aa10.66□□□□□ -0.7
SFSWAP-206ENST00000537582 AMMECR1LQ6DCA0 310 aa10.66□□□□□ -0.7
SFSWAP-206ENST00000537582 ERASQ7Z444 233 aa10.66□□□□□ -0.7
SFSWAP-206ENST00000537582 H0Y8G0 127 aa10.65□□□□□ -0.71
SFSWAP-206ENST00000537582 H7C423 109 aa10.65□□□□□ -0.71
SFSWAP-206ENST00000537582 G0S2P27469 103 aa10.65□□□□□ -0.71
SFSWAP-206ENST00000537582 TCTAP57738 103 aa10.65□□□□□ -0.71
SFSWAP-206ENST00000537582 UBE2DNLQ8IWF7 75 aa10.65□□□□□ -0.71
SFSWAP-206ENST00000537582 IFI27L1Q96BM0 104 aa10.65□□□□□ -0.71
SFSWAP-206ENST00000537582 SPANXA1Q9NS26 97 aa10.65□□□□□ -0.71
SFSWAP-206ENST00000537582 HSBP1L1C9JCN9 74 aa10.64□□□□□ -0.71
SFSWAP-206ENST00000537582 LGALS9CQ6DKI2 356 aa10.64□□□□□ -0.71
SFSWAP-206ENST00000537582 OR5A1Q8NGJ0 315 aa10.64□□□□□ -0.71
SFSWAP-206ENST00000537582 BAALCQ8WXS3 180 aa10.64□□□□□ -0.71
SFSWAP-206ENST00000537582 TIMM17AQ99595 171 aa10.64□□□□□ -0.71
SFSWAP-206ENST00000537582 TIMM21Q9BVV7 248 aa10.64□□□□□ -0.71
SFSWAP-206ENST00000537582 PYGO1Q9Y3Y4 419 aa10.64□□□□□ -0.71
SFSWAP-206ENST00000537582 DNAH1Q9P2D7 4330 aa10.64□□□□□ -0.71
SFSWAP-206ENST00000537582 A0A087WX48 190 aa10.63□□□□□ -0.71
SFSWAP-206ENST00000537582 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.63□□□□□ -0.71
SFSWAP-206ENST00000537582 DGAT2L7PQ6IED9 249 aa10.63□□□□□ -0.71
SFSWAP-206ENST00000537582 CLPSL2Q6UWE3 100 aa10.63□□□□□ -0.71
SFSWAP-206ENST00000537582 CDC42SE2Q9NRR3 84 aa10.63□□□□□ -0.71
SFSWAP-206ENST00000537582 C3orf84H3BNL1 204 aa10.62□□□□□ -0.71
SFSWAP-206ENST00000537582 ATP5LO75964 103 aa10.62□□□□□ -0.71
SFSWAP-206ENST00000537582 TMEM141Q96I45 108 aa10.62□□□□□ -0.71
SFSWAP-206ENST00000537582 UPK3BQ9BT76 320 aa10.62□□□□□ -0.71
SFSWAP-206ENST00000537582 ZNF25P17030 456 aaPredicted RBP10.61□□□□□ -0.71
SFSWAP-206ENST00000537582 COL5A1-AS1Q5SY13 56 aa10.61□□□□□ -0.71
SFSWAP-206ENST00000537582 TMEM101Q96IK0 257 aa10.61□□□□□ -0.71
SFSWAP-206ENST00000537582 CSDC2Q9Y534 153 aaKnown RBP10.61□□□□□ -0.71
SFSWAP-206ENST00000537582 IGKV3OR2-268A0A0C4DH90 116 aa10.6□□□□□ -0.71
SFSWAP-206ENST00000537582 A0A1B0GUV1 79 aa10.6□□□□□ -0.71
SFSWAP-206ENST00000537582 hDV102S1A0JD36 115 aa10.6□□□□□ -0.71
SFSWAP-206ENST00000537582 SIVA1O15304 175 aa10.6□□□□□ -0.71
SFSWAP-206ENST00000537582 ANGP03950 147 aaKnown RBP10.6□□□□□ -0.71
SFSWAP-206ENST00000537582 MRPS36P82909 103 aaKnown RBP10.6□□□□□ -0.71
SFSWAP-206ENST00000537582 PMCHL2Q9BQD1 86 aa10.6□□□□□ -0.71
SFSWAP-206ENST00000537582 KLK12Q9UKR0 248 aa10.6□□□□□ -0.71
SFSWAP-206ENST00000537582 VPS13DQ5THJ4 4388 aa10.6□□□□□ -0.71
SFSWAP-206ENST00000537582 PRSS1P07477 247 aa10.6□□□□□ -0.71
SFSWAP-206ENST00000537582 DNAH10OSP0CZ25 163 aa10.6□□□□□ -0.71
SFSWAP-206ENST00000537582 LINC01556Q5JQF7 62 aa10.6□□□□□ -0.71
SFSWAP-206ENST00000537582 LINC00269Q8N2A0 174 aa10.6□□□□□ -0.71
SFSWAP-206ENST00000537582 Q9H8V8 135 aa10.6□□□□□ -0.71
SFSWAP-206ENST00000537582 PRSS29PA6NIE9 313 aa10.59□□□□□ -0.71
SFSWAP-206ENST00000537582 LINC01549A6NIU2 74 aa10.59□□□□□ -0.71
SFSWAP-206ENST00000537582 SLC25A34Q6PIV7 304 aa10.59□□□□□ -0.71
SFSWAP-206ENST00000537582 AMELXQ99217 191 aa10.59□□□□□ -0.71
SFSWAP-206ENST00000537582 VCX2Q9H322 139 aa10.59□□□□□ -0.71
SFSWAP-206ENST00000537582 CST9LQ9H4G1 147 aa10.59□□□□□ -0.71
SFSWAP-206ENST00000537582 KRTAP1-5Q9BYS1 174 aa10.58□□□□□ -0.72
SFSWAP-206ENST00000537582 PMVKQ15126 192 aa10.57□□□□□ -0.72
SFSWAP-206ENST00000537582 TRAV13-1A0A0B4J241 112 aa10.56□□□□□ -0.72
SFSWAP-206ENST00000537582 SMAGPQ0VAQ4 97 aa10.56□□□□□ -0.72
SFSWAP-206ENST00000537582 BATFQ16520 125 aa10.56□□□□□ -0.72
SFSWAP-206ENST00000537582 ENHOQ6UWT2 76 aa10.56□□□□□ -0.72
SFSWAP-206ENST00000537582 NPSP0C0P6 89 aa10.56□□□□□ -0.72
SFSWAP-206ENST00000537582 COX8AP10176 69 aa10.56□□□□□ -0.72
SFSWAP-206ENST00000537582 REG3AQ06141 175 aa10.56□□□□□ -0.72
SFSWAP-206ENST00000537582 ODF1Q14990 250 aa10.56□□□□□ -0.72
SFSWAP-206ENST00000537582 LY6G6CO95867 125 aa10.55□□□□□ -0.72
SFSWAP-206ENST00000537582 STPG4Q8N801 248 aa10.55□□□□□ -0.72
SFSWAP-206ENST00000537582 UBE2WQ96B02 151 aa10.55□□□□□ -0.72
SFSWAP-206ENST00000537582 MRPL35Q9NZE8 188 aaKnown RBP10.55□□□□□ -0.72
SFSWAP-206ENST00000537582 IGLV4-69A0A075B6H9 119 aa10.54□□□□□ -0.72
SFSWAP-206ENST00000537582 IGLV10-54A0A075B6I4 117 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 213 ms