RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 NDUFA1O15239 70 aa11.39□□□□□ -0.59
CHFR-213ENST00000536843 IGHV3-11P01762 117 aa11.39□□□□□ -0.59
CHFR-213ENST00000536843 BAALC-AS2P0C853 105 aa11.39□□□□□ -0.59
CHFR-213ENST00000536843 IGHG2P01859 326 aa11.38□□□□□ -0.59
CHFR-213ENST00000536843 MSMBP08118 114 aa11.38□□□□□ -0.59
CHFR-213ENST00000536843 UBR5O95071 2799 aaPredicted RBP11.38□□□□□ -0.59
CHFR-213ENST00000536843 DPH3Q96FX2 82 aa11.38□□□□□ -0.59
CHFR-213ENST00000536843 CYSTM1Q9H1C7 97 aa11.38□□□□□ -0.59
CHFR-213ENST00000536843 RPL18AQ02543 176 aaKnown RBP11.37□□□□□ -0.59
CHFR-213ENST00000536843 LINC00308Q8TCZ7 52 aa11.37□□□□□ -0.59
CHFR-213ENST00000536843 AVPP01185 164 aa11.37□□□□□ -0.59
CHFR-213ENST00000536843 PF4V1P10720 104 aa11.37□□□□□ -0.59
CHFR-213ENST00000536843 CIRBPQ14011 172 aaKnown RBP11.37□□□□□ -0.59
CHFR-213ENST00000536843 KMT2BQ9UMN6 2715 aaPredicted RBP11.36□□□□□ -0.59
CHFR-213ENST00000536843 USMG5Q96IX5 58 aa11.35□□□□□ -0.59
CHFR-213ENST00000536843 CRYBG3Q68DQ2 2970 aa11.35□□□□□ -0.59
CHFR-213ENST00000536843 RNASE13Q5GAN3 156 aaKnown RBP11.35□□□□□ -0.59
CHFR-213ENST00000536843 UPK3BQ9BT76 320 aa11.35□□□□□ -0.59
CHFR-213ENST00000536843 IGKV3-7A0A075B6H7 116 aa11.34□□□□□ -0.59
CHFR-213ENST00000536843 H3BUA1 57 aa11.34□□□□□ -0.59
CHFR-213ENST00000536843 Q8N2B8 174 aa11.34□□□□□ -0.59
CHFR-213ENST00000536843 UTP20O75691 2785 aaKnown RBP11.34□□□□□ -0.59
CHFR-213ENST00000536843 SERP2Q8N6R1 65 aa11.34□□□□□ -0.59
CHFR-213ENST00000536843 COPS9Q8WXC6 57 aa11.34□□□□□ -0.59
CHFR-213ENST00000536843 RHPN1-AS1Q9BWJ2 59 aa11.34□□□□□ -0.59
CHFR-213ENST00000536843 KIR2DL5BQ8NHK3 375 aa11.33□□□□□ -0.6
CHFR-213ENST00000536843 IGLV5-45A0A087WSX0 123 aa11.33□□□□□ -0.6
CHFR-213ENST00000536843 B4DSR2 109 aa11.33□□□□□ -0.6
CHFR-213ENST00000536843 CSMD2Q7Z408 3487 aa11.32□□□□□ -0.6
CHFR-213ENST00000536843 UBE2D4Q9Y2X8 147 aa11.32□□□□□ -0.6
CHFR-213ENST00000536843 IGLV1-40P01703 118 aa11.31□□□□□ -0.6
CHFR-213ENST00000536843 ZNF415Q09FC8 603 aa11.31□□□□□ -0.6
CHFR-213ENST00000536843 FAM208BQ5VWN6 2430 aa11.31□□□□□ -0.6
CHFR-213ENST00000536843 OXTP01178 125 aa11.31□□□□□ -0.6
CHFR-213ENST00000536843 FAM218AQ96MZ4 157 aa11.31□□□□□ -0.6
CHFR-213ENST00000536843 CHD6Q8TD26 2715 aa11.31□□□□□ -0.6
CHFR-213ENST00000536843 IGHV1OR15-1A0A075B7D0 117 aa11.3□□□□□ -0.6
CHFR-213ENST00000536843 Q6JHZ5 121 aa11.3□□□□□ -0.6
CHFR-213ENST00000536843 CDKN2A-AS1Q9UH64 79 aa11.3□□□□□ -0.6
CHFR-213ENST00000536843 CELSR2Q9HCU4 2923 aa11.3□□□□□ -0.6
CHFR-213ENST00000536843 MALP21145 153 aa11.3□□□□□ -0.6
CHFR-213ENST00000536843 SOSTDC1Q6X4U4 206 aa11.3□□□□□ -0.6
CHFR-213ENST00000536843 CHCHD7Q9BUK0 85 aa11.3□□□□□ -0.6
CHFR-213ENST00000536843 LRRK2Q5S007 2527 aa11.29□□□□□ -0.6
CHFR-213ENST00000536843 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.29□□□□□ -0.62e-6■■■■□ 23
CHFR-213ENST00000536843 TRAV13-1A0A0B4J241 112 aa11.29□□□□□ -0.6
CHFR-213ENST00000536843 CFHR3Q02985 330 aa11.29□□□□□ -0.6
CHFR-213ENST00000536843 EDN2P20800 178 aa11.29□□□□□ -0.6
CHFR-213ENST00000536843 IGLV5-39A0A0G2JS06 123 aa11.28□□□□□ -0.6
CHFR-213ENST00000536843 DEFB112Q30KQ8 113 aa11.28□□□□□ -0.6
CHFR-213ENST00000536843 PRIMA1Q86XR5 153 aa11.28□□□□□ -0.6
CHFR-213ENST00000536843 Q9H8V8 135 aa11.28□□□□□ -0.6
CHFR-213ENST00000536843 IGHV4-59P01825 116 aa11.28□□□□□ -0.6
CHFR-213ENST00000536843 Q5XG85 94 aa11.28□□□□□ -0.6
CHFR-213ENST00000536843 TRAV12-2A0A075B6T6 113 aa11.27□□□□□ -0.6
CHFR-213ENST00000536843 DNAL4O96015 105 aa11.27□□□□□ -0.6
CHFR-213ENST00000536843 PLA2G2AP14555 144 aa11.27□□□□□ -0.6
CHFR-213ENST00000536843 DSCR9P59020 149 aa11.27□□□□□ -0.6
CHFR-213ENST00000536843 DSCR8Q96T75 97 aa11.27□□□□□ -0.6
CHFR-213ENST00000536843 CSPG4Q6UVK1 2322 aa11.27□□□□□ -0.61
CHFR-213ENST00000536843 J3QKU1 62 aa11.27□□□□□ -0.61
CHFR-213ENST00000536843 MAPK1IP1LQ8NDC0 245 aa11.27□□□□□ -0.61
CHFR-213ENST00000536843 C4orf26Q17RF5 130 aa11.26□□□□□ -0.61
CHFR-213ENST00000536843 C10orf99Q6UWK7 81 aa11.26□□□□□ -0.61
CHFR-213ENST00000536843 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.26□□□□□ -0.61
CHFR-213ENST00000536843 LINC01356Q8N9X3 169 aa11.26□□□□□ -0.61
CHFR-213ENST00000536843 CENPEQ02224 2701 aa11.25□□□□□ -0.61
CHFR-213ENST00000536843 F5H768 121 aa11.25□□□□□ -0.61
CHFR-213ENST00000536843 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.25□□□□□ -0.61
CHFR-213ENST00000536843 IGKV2-29A2NJV5 120 aaPredicted RBP11.25□□□□□ -0.61
CHFR-213ENST00000536843 HIST2H2BCQ6DN03 193 aa11.25□□□□□ -0.61
CHFR-213ENST00000536843 HIST2H2BDQ6DRA6 164 aa11.25□□□□□ -0.61
CHFR-213ENST00000536843 RPL28P46779 137 aaKnown RBP11.24□□□□□ -0.61
CHFR-213ENST00000536843 OBSCN-AS1Q96MR7 158 aa11.24□□□□□ -0.61
CHFR-213ENST00000536843 OVOL2Q9BRP0 275 aa11.24□□□□□ -0.61
CHFR-213ENST00000536843 Q9HAA7 133 aa11.24□□□□□ -0.61
CHFR-213ENST00000536843 A0A096LNT2 108 aa11.24□□□□□ -0.61
CHFR-213ENST00000536843 IGKV3D-7A0A0C4DH55 119 aa11.24□□□□□ -0.61
CHFR-213ENST00000536843 USP17L23D6RBM5 183 aa11.24□□□□□ -0.61
CHFR-213ENST00000536843 PF4P02776 101 aa11.24□□□□□ -0.61
CHFR-213ENST00000536843 PSMB8P28062 276 aa11.24□□□□□ -0.61
CHFR-213ENST00000536843 LINC01561Q8N1V8 128 aa11.24□□□□□ -0.61
CHFR-213ENST00000536843 LINC00467Q9BRT7 94 aa11.24□□□□□ -0.61
CHFR-213ENST00000536843 PROK1P58294 105 aa11.23□□□□□ -0.61
CHFR-213ENST00000536843 A0A0U1RRA0 63 aa11.23□□□□□ -0.61
CHFR-213ENST00000536843 K7EMT4 169 aa11.23□□□□□ -0.61
CHFR-213ENST00000536843 ZNF625Q96I27 306 aaPredicted RBP11.23□□□□□ -0.61
CHFR-213ENST00000536843 LINC00846Q9NV44 126 aa11.23□□□□□ -0.61
CHFR-213ENST00000536843 IGHV3-73A0A0B4J1V6 119 aa11.22□□□□□ -0.61
CHFR-213ENST00000536843 SYNJ2BPP57105 145 aa11.22□□□□□ -0.61
CHFR-213ENST00000536843 HRCT1Q6UXD1 115 aa11.22□□□□□ -0.61
CHFR-213ENST00000536843 IGKV3-20P01619 116 aa11.21□□□□□ -0.61
CHFR-213ENST00000536843 COX6A2Q02221 97 aa11.21□□□□□ -0.61
CHFR-213ENST00000536843 SPINK13Q1W4C9 94 aa11.21□□□□□ -0.61
CHFR-213ENST00000536843 RNF152Q8N8N0 203 aa11.21□□□□□ -0.61
CHFR-213ENST00000536843 MRAPQ8TCY5 172 aa11.21□□□□□ -0.61
CHFR-213ENST00000536843 A0A087WVE0 104 aa11.21□□□□□ -0.61
CHFR-213ENST00000536843 TRAV13-2A0A0B4J235 113 aa11.2□□□□□ -0.62
CHFR-213ENST00000536843 NDUFC2-KCTD14E9PQ53 114 aa11.2□□□□□ -0.62
CHFR-213ENST00000536843 RS1O15537 224 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms