RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 FAM222AQ5U5X8 452 aa16■□□□□ 0.15
HMGA2-206ENST00000536545 IGHV4-28A0A0C4DH34 117 aa15.99■□□□□ 0.15
HMGA2-206ENST00000536545 CSDC2Q9Y534 153 aaKnown RBP15.99■□□□□ 0.15
HMGA2-206ENST00000536545 TAL2Q16559 108 aa15.98■□□□□ 0.15
HMGA2-206ENST00000536545 OXLD1Q5BKU9 147 aa15.98■□□□□ 0.15
HMGA2-206ENST00000536545 TINCRA0A1B0GVN0 87 aa15.98■□□□□ 0.15
HMGA2-206ENST00000536545 A6NDN8 102 aa15.98■□□□□ 0.15
HMGA2-206ENST00000536545 UBE2D1P51668 147 aa15.98■□□□□ 0.15
HMGA2-206ENST00000536545 Q8NAQ8 132 aa15.98■□□□□ 0.15
HMGA2-206ENST00000536545 LEPROTO15243 131 aa15.97■□□□□ 0.15
HMGA2-206ENST00000536545 GCSHP23434 173 aa15.97■□□□□ 0.15
HMGA2-206ENST00000536545 FXYD2P54710 66 aa15.97■□□□□ 0.15
HMGA2-206ENST00000536545 TMEM243Q9BU79 118 aa15.97■□□□□ 0.15
HMGA2-206ENST00000536545 TM2D2Q9BX73 214 aa15.97■□□□□ 0.15
HMGA2-206ENST00000536545 STAB1Q9NY15 2570 aa15.97■□□□□ 0.15
HMGA2-206ENST00000536545 J3QQQ9 107 aa15.96■□□□□ 0.15
HMGA2-206ENST00000536545 KRTAP10-11P60412 298 aa15.96■□□□□ 0.15
HMGA2-206ENST00000536545 DGAT2L7PQ6IED9 249 aa15.96■□□□□ 0.15
HMGA2-206ENST00000536545 CEND1Q8N111 149 aa15.96■□□□□ 0.15
HMGA2-206ENST00000536545 PLEKHB2Q96CS7 222 aa15.96■□□□□ 0.15
HMGA2-206ENST00000536545 RNF183Q96D59 192 aa15.96■□□□□ 0.15
HMGA2-206ENST00000536545 CMYA5Q8N3K9 4069 aa15.96■□□□□ 0.15
HMGA2-206ENST00000536545 MIFP14174 115 aa15.95■□□□□ 0.14
HMGA2-206ENST00000536545 EGFEM1PQ0D2K5 195 aa15.95■□□□□ 0.14
HMGA2-206ENST00000536545 SMAGPQ0VAQ4 97 aa15.95■□□□□ 0.14
HMGA2-206ENST00000536545 DEFB4AO15263 64 aa15.94■□□□□ 0.14
HMGA2-206ENST00000536545 K7EP13 123 aa15.93■□□□□ 0.14
HMGA2-206ENST00000536545 H7C423 109 aa15.92■□□□□ 0.14
HMGA2-206ENST00000536545 LGALS3P17931 250 aaKnown RBP15.92■□□□□ 0.14
HMGA2-206ENST00000536545 SCGB1D4Q6XE38 83 aa15.92■□□□□ 0.14
HMGA2-206ENST00000536545 HIST1H4GQ99525 98 aa15.92■□□□□ 0.14
HMGA2-206ENST00000536545 MAST4O15021 2626 aa15.91■□□□□ 0.14
HMGA2-206ENST00000536545 IGLV5-45A0A087WSX0 123 aa15.91■□□□□ 0.14
HMGA2-206ENST00000536545 H3BRM9 83 aa15.91■□□□□ 0.14
HMGA2-206ENST00000536545 UBE2L6O14933 153 aa15.91■□□□□ 0.14
HMGA2-206ENST00000536545 GYPEP15421 78 aa15.91■□□□□ 0.14
HMGA2-206ENST00000536545 FAM19A3Q7Z5A8 133 aa15.91■□□□□ 0.14
HMGA2-206ENST00000536545 LINC00469Q8N7U9 141 aa15.91■□□□□ 0.14
HMGA2-206ENST00000536545 OR5A1Q8NGJ0 315 aa15.91■□□□□ 0.14
HMGA2-206ENST00000536545 CDC42SE2Q9NRR3 84 aa15.91■□□□□ 0.14
HMGA2-206ENST00000536545 PRO0255Q9UI72 69 aa15.91■□□□□ 0.14
HMGA2-206ENST00000536545 IGHV3-64A0A075B6Q5 118 aa15.9■□□□□ 0.14
HMGA2-206ENST00000536545 TRBV6-8A0A0A6YYG3 113 aa15.9■□□□□ 0.14
HMGA2-206ENST00000536545 TIRAPP58753 221 aa15.9■□□□□ 0.14
HMGA2-206ENST00000536545 CELA1Q9UNI1 258 aa15.9■□□□□ 0.14
HMGA2-206ENST00000536545 A0A0J9YY99 117 aa15.9■□□□□ 0.14
HMGA2-206ENST00000536545 A8MZ25 164 aa15.89■□□□□ 0.13
HMGA2-206ENST00000536545 AMMECR1LQ6DCA0 310 aa15.89■□□□□ 0.13
HMGA2-206ENST00000536545 GEMIN7Q9H840 131 aaKnown RBP15.89■□□□□ 0.13
HMGA2-206ENST00000536545 IGHV3-30-3P0DP02 117 aa15.88■□□□□ 0.13
HMGA2-206ENST00000536545 IGHV1-58A0A0C4DH39 117 aa15.87■□□□□ 0.13
HMGA2-206ENST00000536545 DAD1P61803 113 aa15.87■□□□□ 0.13
HMGA2-206ENST00000536545 TRAV8-3A0A0A6YYJ7 113 aa15.87■□□□□ 0.13
HMGA2-206ENST00000536545 PTTG1IPP53801 180 aa15.87■□□□□ 0.13
HMGA2-206ENST00000536545 LINC00242Q5T6M2 205 aa15.87■□□□□ 0.13
HMGA2-206ENST00000536545 TMEM101Q96IK0 257 aa15.87■□□□□ 0.13
HMGA2-206ENST00000536545 DNAH3Q8TD57 4116 aa15.86■□□□□ 0.13
HMGA2-206ENST00000536545 ATP6V0E2Q8NHE4 81 aa15.86■□□□□ 0.13
HMGA2-206ENST00000536545 VSIG2Q96IQ7 327 aa15.86■□□□□ 0.13
HMGA2-206ENST00000536545 SPANXB1Q9NS25 103 aaPredicted RBP15.86■□□□□ 0.13
HMGA2-206ENST00000536545 SPINK8P0C7L1 97 aa15.85■□□□□ 0.13
HMGA2-206ENST00000536545 GAGE6Q13070 117 aa15.85■□□□□ 0.13
HMGA2-206ENST00000536545 CDKN2A-AS1Q9UH64 79 aa15.85■□□□□ 0.13
HMGA2-206ENST00000536545 PKD1L1Q8TDX9 2849 aa15.85■□□□□ 0.13
HMGA2-206ENST00000536545 C9orf118A6NHY6 69 aa15.85■□□□□ 0.13
HMGA2-206ENST00000536545 HERVK_113P63121 156 aa15.85■□□□□ 0.13
HMGA2-206ENST00000536545 COX6A2Q02221 97 aa15.85■□□□□ 0.13
HMGA2-206ENST00000536545 K7ERJ3 54 aa15.84■□□□□ 0.13
HMGA2-206ENST00000536545 PAX4O43316 350 aa15.84■□□□□ 0.13
HMGA2-206ENST00000536545 SPART-AS1P0CW21 52 aa15.84■□□□□ 0.13
HMGA2-206ENST00000536545 NHP2Q9NX24 153 aaKnown RBP15.84■□□□□ 0.13
HMGA2-206ENST00000536545 SMIM13P0DJ93 91 aa15.83■□□□□ 0.12
HMGA2-206ENST00000536545 C10orf126Q8N4M7 172 aa15.83■□□□□ 0.12
HMGA2-206ENST00000536545 TRAV13-1A0A0B4J241 112 aa15.82■□□□□ 0.12
HMGA2-206ENST00000536545 ATP5G1P05496 136 aa15.82■□□□□ 0.12
HMGA2-206ENST00000536545 CHCHD5Q9BSY4 110 aa15.82■□□□□ 0.12
HMGA2-206ENST00000536545 VAMP3Q15836 100 aa15.82■□□□□ 0.12
HMGA2-206ENST00000536545 RAB37Q96AX2 223 aa15.81■□□□□ 0.12
HMGA2-206ENST00000536545 A0A1B0GWB2 263 aa15.8■□□□□ 0.12
HMGA2-206ENST00000536545 SRSF9Q13242 221 aaKnown RBP eCLIP15.8■□□□□ 0.126e-10■■■■■ 30.8
HMGA2-206ENST00000536545 IGLV4-60A0A075B6I1 120 aa15.8■□□□□ 0.12
HMGA2-206ENST00000536545 UBE2V1Q13404 147 aa15.8■□□□□ 0.12
HMGA2-206ENST00000536545 IGLV5-39A0A0G2JS06 123 aa15.79■□□□□ 0.12
HMGA2-206ENST00000536545 G3V4G9 280 aa15.79■□□□□ 0.12
HMGA2-206ENST00000536545 RETNQ9HD89 108 aa15.79■□□□□ 0.12
HMGA2-206ENST00000536545 COL6A5A8TX70 2615 aa15.78■□□□□ 0.12
HMGA2-206ENST00000536545 H3BUT2 72 aa15.78■□□□□ 0.12
HMGA2-206ENST00000536545 IGHV3-30P01768 117 aa15.78■□□□□ 0.12
HMGA2-206ENST00000536545 IGHV3-30-5P0DP03 117 aa15.78■□□□□ 0.12
HMGA2-206ENST00000536545 C12orf74Q32Q52 190 aa15.78■□□□□ 0.12
HMGA2-206ENST00000536545 ZFAND6Q6FIF0 208 aa15.78■□□□□ 0.12
HMGA2-206ENST00000536545 A0A0J9YXY3 114 aa15.77■□□□□ 0.12
HMGA2-206ENST00000536545 TEX48A0A1B0GUV7 120 aa15.77■□□□□ 0.12
HMGA2-206ENST00000536545 NDUFA12Q9UI09 145 aa15.77■□□□□ 0.12
HMGA2-206ENST00000536545 ANK2Q01484 3957 aa15.77■□□□□ 0.12
HMGA2-206ENST00000536545 NAA38Q9BRA0 125 aaKnown RBP15.77■□□□□ 0.11
HMGA2-206ENST00000536545 A0A096LPF7 62 aa15.76■□□□□ 0.11
HMGA2-206ENST00000536545 F5H768 121 aa15.76■□□□□ 0.11
HMGA2-206ENST00000536545 CCL25O15444 150 aa15.76■□□□□ 0.11
HMGA2-206ENST00000536545 TRAV26-1A0A087WT03 109 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms