RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 SYCNQ0VAF6 134 aa1.71□□□□□ -2.14
SKA3-207ENST00000536239 FAM229BQ4G0N7 80 aa1.71□□□□□ -2.14
SKA3-207ENST00000536239 CLEC19AQ6UXS0 136 aa1.71□□□□□ -2.14
SKA3-207ENST00000536239 ZNF833PQ6ZTB9 187 aa1.71□□□□□ -2.14
SKA3-207ENST00000536239 C17orf82Q86X59 251 aaPredicted RBP1.71□□□□□ -2.14
SKA3-207ENST00000536239 Q8N6K4 173 aa1.71□□□□□ -2.14
SKA3-207ENST00000536239 NKAPP1Q8N9T2 125 aa1.71□□□□□ -2.14
SKA3-207ENST00000536239 LINC01560Q8TB33 94 aa1.71□□□□□ -2.14
SKA3-207ENST00000536239 CCL13Q99616 98 aa1.71□□□□□ -2.14
SKA3-207ENST00000536239 UBL5Q9BZL1 73 aa1.71□□□□□ -2.14
SKA3-207ENST00000536239 FGF23Q9GZV9 251 aaPredicted RBP1.71□□□□□ -2.14
SKA3-207ENST00000536239 CYP4F30PQ9H0H9 118 aa1.71□□□□□ -2.14
SKA3-207ENST00000536239 NDUFA4L2Q9NRX3 87 aa1.71□□□□□ -2.14
SKA3-207ENST00000536239 SNURFQ9Y675 71 aa1.71□□□□□ -2.14
SKA3-207ENST00000536239 PCNX2A6NKB5 2137 aa1.7□□□□□ -2.14
SKA3-207ENST00000536239 ARHGAP32A7KAX9 2087 aa1.7□□□□□ -2.14
SKA3-207ENST00000536239 DSCAML1Q8TD84 2053 aa1.7□□□□□ -2.14
SKA3-207ENST00000536239 TRAV12-3A0A0B4J271 114 aa1.7□□□□□ -2.14
SKA3-207ENST00000536239 CCL24O00175 119 aa1.7□□□□□ -2.14
SKA3-207ENST00000536239 LHBP01229 141 aa1.7□□□□□ -2.14
SKA3-207ENST00000536239 IGLV3-19P01714 112 aa1.7□□□□□ -2.14
SKA3-207ENST00000536239 CD59P13987 128 aa1.7□□□□□ -2.14
SKA3-207ENST00000536239 S100A4P26447 101 aaKnown RBP1.7□□□□□ -2.14
SKA3-207ENST00000536239 KIAA0087Q14695 138 aa1.7□□□□□ -2.14
SKA3-207ENST00000536239 ARFGEF3Q5TH69 2177 aa1.7□□□□□ -2.14
SKA3-207ENST00000536239 SPANXN1Q5VSR9 72 aa1.7□□□□□ -2.14
SKA3-207ENST00000536239 ENHOQ6UWT2 76 aa1.7□□□□□ -2.14
SKA3-207ENST00000536239 LINC00269Q8N2A0 174 aa1.7□□□□□ -2.14
SKA3-207ENST00000536239 TMEM254Q8TBM7 123 aa1.7□□□□□ -2.14
SKA3-207ENST00000536239 C14orf132Q9NPU4 83 aa1.7□□□□□ -2.14
SKA3-207ENST00000536239 MRPL36Q9P0J6 103 aaKnown RBP1.7□□□□□ -2.14
SKA3-207ENST00000536239 ZNF407Q9C0G0 2248 aa1.7□□□□□ -2.14
SKA3-207ENST00000536239 A0A087WZ39 114 aa1.69□□□□□ -2.14
SKA3-207ENST00000536239 IGKV3D-11A0A0A0MRZ8 115 aa1.69□□□□□ -2.14
SKA3-207ENST00000536239 TRAV22A0A0B4J277 110 aa1.69□□□□□ -2.14
SKA3-207ENST00000536239 IGHV1-18A0A0C4DH31 117 aa1.69□□□□□ -2.14
SKA3-207ENST00000536239 C16orf90A8MZG2 172 aa1.69□□□□□ -2.14
SKA3-207ENST00000536239 H3BRN7 92 aa1.69□□□□□ -2.14
SKA3-207ENST00000536239 IGHV3-30-3P0DP02 117 aa1.69□□□□□ -2.14
SKA3-207ENST00000536239 MP68P56378 58 aa1.69□□□□□ -2.14
SKA3-207ENST00000536239 NREPQ16612 68 aa1.69□□□□□ -2.14
SKA3-207ENST00000536239 ASB16-AS1Q495Z4 193 aa1.69□□□□□ -2.14
SKA3-207ENST00000536239 FAM19A3Q7Z5A8 133 aa1.69□□□□□ -2.14
SKA3-207ENST00000536239 GPHB5Q86YW7 130 aa1.69□□□□□ -2.14
SKA3-207ENST00000536239 TMEM167AQ8TBQ9 72 aa1.69□□□□□ -2.14
SKA3-207ENST00000536239 LIMD2Q9BT23 127 aa1.69□□□□□ -2.14
SKA3-207ENST00000536239 ORMDL1Q9P0S3 153 aa1.69□□□□□ -2.14
SKA3-207ENST00000536239 NDUFA12Q9UI09 145 aa1.69□□□□□ -2.14
SKA3-207ENST00000536239 Q9Y3F1 56 aa1.69□□□□□ -2.14
SKA3-207ENST00000536239 PLXNB1O43157 2135 aa1.69□□□□□ -2.14
SKA3-207ENST00000536239 TRBV6-8A0A0A6YYG3 113 aa1.68□□□□□ -2.14
SKA3-207ENST00000536239 IGHV3-43A0A0B4J1X8 118 aa1.68□□□□□ -2.14
SKA3-207ENST00000536239 TRAV10A0A0B4J240 114 aa1.68□□□□□ -2.14
SKA3-207ENST00000536239 IGHV7-4-1A0A0J9YVY3 117 aa1.68□□□□□ -2.14
SKA3-207ENST00000536239 DEFB108AA8MXU0 73 aa1.68□□□□□ -2.14
SKA3-207ENST00000536239 HCG22E2RYF7 251 aa1.68□□□□□ -2.14
SKA3-207ENST00000536239 H0Y9J4 135 aa1.68□□□□□ -2.14
SKA3-207ENST00000536239 H3BQ85 93 aa1.68□□□□□ -2.14
SKA3-207ENST00000536239 BUB1B-PAK6H3BSN5 160 aa1.68□□□□□ -2.14
SKA3-207ENST00000536239 NDUFA1O15239 70 aa1.68□□□□□ -2.14
SKA3-207ENST00000536239 GNRH2O43555 120 aa1.68□□□□□ -2.14
SKA3-207ENST00000536239 TRGV3P03979 118 aa1.68□□□□□ -2.14
SKA3-207ENST00000536239 CTSGP08311 255 aa1.68□□□□□ -2.14
SKA3-207ENST00000536239 SAA1P0DJI8 122 aaPredicted RBP1.68□□□□□ -2.14
SKA3-207ENST00000536239 IGHV3-43DP0DP04 118 aa1.68□□□□□ -2.14
SKA3-207ENST00000536239 PDE6GP18545 87 aa1.68□□□□□ -2.14
SKA3-207ENST00000536239 PI4KAP42356 2102 aa1.68□□□□□ -2.14
SKA3-207ENST00000536239 POLR2KP53803 58 aaKnown RBP1.68□□□□□ -2.14
SKA3-207ENST00000536239 KRTAP21-2Q3LI59 83 aa1.68□□□□□ -2.14
SKA3-207ENST00000536239 LINC01554Q52M75 96 aa1.68□□□□□ -2.14
SKA3-207ENST00000536239 RPL39P5Q59GN2 51 aa1.68□□□□□ -2.14
SKA3-207ENST00000536239 Q6ZS52 159 aa1.68□□□□□ -2.14
SKA3-207ENST00000536239 ZGRF1Q86YA3 2104 aa1.68□□□□□ -2.14
SKA3-207ENST00000536239 LINC00308Q8TCZ7 52 aa1.68□□□□□ -2.14
SKA3-207ENST00000536239 ZNF625Q96I27 306 aaPredicted RBP1.68□□□□□ -2.14
SKA3-207ENST00000536239 RTTNQ86VV8 2226 aa1.67□□□□□ -2.14
SKA3-207ENST00000536239 PRR14LQ5THK1 2151 aa1.67□□□□□ -2.14
SKA3-207ENST00000536239 IGHV4-30-2A0A087WSY4 118 aa1.67□□□□□ -2.14
SKA3-207ENST00000536239 IGHV3OR16-9A0A0B4J2B5 98 aa1.67□□□□□ -2.14
SKA3-207ENST00000536239 TRBV6-5A0A0K0K1A5 114 aa1.67□□□□□ -2.14
SKA3-207ENST00000536239 C5orf67F2Z3F1 127 aa1.67□□□□□ -2.14
SKA3-207ENST00000536239 PSPHP1O15172 72 aa1.67□□□□□ -2.14
SKA3-207ENST00000536239 PSCAO43653 123 aa1.67□□□□□ -2.14
SKA3-207ENST00000536239 IGHV3-9P01782 118 aa1.67□□□□□ -2.14
SKA3-207ENST00000536239 PRM2P04554 102 aa1.67□□□□□ -2.14
SKA3-207ENST00000536239 SAA2P0DJI9 122 aaPredicted RBP1.67□□□□□ -2.14
SKA3-207ENST00000536239 CD52P31358 61 aa1.67□□□□□ -2.14
SKA3-207ENST00000536239 LINC00313P59037 77 aa1.67□□□□□ -2.14
SKA3-207ENST00000536239 RPS21P63220 83 aaKnown RBP1.67□□□□□ -2.14
SKA3-207ENST00000536239 WT1-ASQ06250 92 aa1.67□□□□□ -2.14
SKA3-207ENST00000536239 Q5VV11 94 aa1.67□□□□□ -2.14
SKA3-207ENST00000536239 LINC00337Q8N6G1 96 aa1.67□□□□□ -2.14
SKA3-207ENST00000536239 C1orf64Q8NEQ6 169 aa1.67□□□□□ -2.14
SKA3-207ENST00000536239 CCL4L1Q8NHW4 92 aa1.67□□□□□ -2.14
SKA3-207ENST00000536239 ITLN2Q8WWU7 325 aaPredicted RBP1.67□□□□□ -2.14
SKA3-207ENST00000536239 FAM218AQ96MZ4 157 aa1.67□□□□□ -2.14
SKA3-207ENST00000536239 LINC00574Q9H8X3 128 aa1.67□□□□□ -2.14
SKA3-207ENST00000536239 Q9HAA7 133 aa1.67□□□□□ -2.14
SKA3-207ENST00000536239 CDC42SE1Q9NRR8 79 aa1.67□□□□□ -2.14
SKA3-207ENST00000536239 LENEPQ9Y5L5 61 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms