RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 Q6ZSV7 163 aa4.22□□□□□ -1.73
TNFRSF1A-206ENST00000535038 FAM19A3Q7Z5A8 133 aa4.22□□□□□ -1.73
TNFRSF1A-206ENST00000535038 C10orf126Q8N4M7 172 aa4.22□□□□□ -1.73
TNFRSF1A-206ENST00000535038 ATP6V0E2Q8NHE4 81 aa4.22□□□□□ -1.73
TNFRSF1A-206ENST00000535038 DNAJC30Q96LL9 226 aa4.22□□□□□ -1.73
TNFRSF1A-206ENST00000535038 SPXQ9BT56 116 aa4.22□□□□□ -1.73
TNFRSF1A-206ENST00000535038 SPANXA1Q9NS26 97 aa4.22□□□□□ -1.73
TNFRSF1A-206ENST00000535038 Q9UF83 564 aa4.22□□□□□ -1.73
TNFRSF1A-206ENST00000535038 ABCA12Q86UK0 2595 aa4.22□□□□□ -1.73
TNFRSF1A-206ENST00000535038 A0A0J9YXV3 536 aa4.21□□□□□ -1.74
TNFRSF1A-206ENST00000535038 TINCRA0A1B0GVN0 87 aa4.21□□□□□ -1.74
TNFRSF1A-206ENST00000535038 M0QXV9 152 aa4.21□□□□□ -1.74
TNFRSF1A-206ENST00000535038 C1orf158Q8N1D5 194 aa4.21□□□□□ -1.74
TNFRSF1A-206ENST00000535038 DEFB104AQ8WTQ1 72 aa4.21□□□□□ -1.74
TNFRSF1A-206ENST00000535038 TMEM263Q8WUH6 116 aaKnown RBP4.21□□□□□ -1.74
TNFRSF1A-206ENST00000535038 VPS25Q9BRG1 176 aa4.21□□□□□ -1.74
TNFRSF1A-206ENST00000535038 TIMM21Q9BVV7 248 aa4.21□□□□□ -1.74
TNFRSF1A-206ENST00000535038 UBE2D4Q9Y2X8 147 aa4.21□□□□□ -1.74
TNFRSF1A-206ENST00000535038 ITPR3Q14573 2671 aa4.21□□□□□ -1.74
TNFRSF1A-206ENST00000535038 TEX15Q9BXT5 2789 aa4.21□□□□□ -1.74
TNFRSF1A-206ENST00000535038 A0A0B4J2C4 111 aa4.2□□□□□ -1.74
TNFRSF1A-206ENST00000535038 IGHV1-58A0A0C4DH39 117 aa4.2□□□□□ -1.74
TNFRSF1A-206ENST00000535038 A0A0J9YXY3 114 aa4.2□□□□□ -1.74
TNFRSF1A-206ENST00000535038 H3BMG7 143 aa4.2□□□□□ -1.74
TNFRSF1A-206ENST00000535038 INSP01308 110 aa4.2□□□□□ -1.74
TNFRSF1A-206ENST00000535038 IGHV3-33P01772 117 aa4.2□□□□□ -1.74
TNFRSF1A-206ENST00000535038 PRM2P04554 102 aa4.2□□□□□ -1.74
TNFRSF1A-206ENST00000535038 CD28P10747 220 aa4.2□□□□□ -1.74
TNFRSF1A-206ENST00000535038 LGALS3P17931 250 aaKnown RBP4.2□□□□□ -1.74
TNFRSF1A-206ENST00000535038 TMEM170BQ5T4T1 132 aa4.2□□□□□ -1.74
TNFRSF1A-206ENST00000535038 SCGB1D4Q6XE38 83 aa4.2□□□□□ -1.74
TNFRSF1A-206ENST00000535038 RNF183Q96D59 192 aa4.2□□□□□ -1.74
TNFRSF1A-206ENST00000535038 DUX3Q96PT4 197 aa4.2□□□□□ -1.74
TNFRSF1A-206ENST00000535038 VCX2Q9H322 139 aa4.2□□□□□ -1.74
TNFRSF1A-206ENST00000535038 C16orf95Q9H693 158 aa4.2□□□□□ -1.74
TNFRSF1A-206ENST00000535038 MAP1AP78559 2803 aaPredicted RBP4.2□□□□□ -1.74
TNFRSF1A-206ENST00000535038 CSMD2Q7Z408 3487 aa4.19□□□□□ -1.74
TNFRSF1A-206ENST00000535038 APCP25054 2843 aa4.19□□□□□ -1.74
TNFRSF1A-206ENST00000535038 CRYBG3Q68DQ2 2970 aa4.19□□□□□ -1.74
TNFRSF1A-206ENST00000535038 GIG44P09565 113 aaPredicted RBP4.19□□□□□ -1.74
TNFRSF1A-206ENST00000535038 IGHV3-30-3P0DP02 117 aa4.19□□□□□ -1.74
TNFRSF1A-206ENST00000535038 SRSF9Q13242 221 aaKnown RBP eCLIP4.19□□□□□ -1.74
TNFRSF1A-206ENST00000535038 SH2D6Q7Z4S9 175 aa4.19□□□□□ -1.74
TNFRSF1A-206ENST00000535038 TEX29Q8N6K0 151 aa4.19□□□□□ -1.74
TNFRSF1A-206ENST00000535038 PRR26Q8N8Z3 221 aa4.19□□□□□ -1.74
TNFRSF1A-206ENST00000535038 VSIG2Q96IQ7 327 aa4.19□□□□□ -1.74
TNFRSF1A-206ENST00000535038 SPANXDQ9BXN6 97 aa4.19□□□□□ -1.74
TNFRSF1A-206ENST00000535038 ESM1Q9NQ30 184 aa4.19□□□□□ -1.74
TNFRSF1A-206ENST00000535038 SPANXCQ9NY87 97 aa4.19□□□□□ -1.74
TNFRSF1A-206ENST00000535038 PRO1854Q9UHT4 67 aa4.19□□□□□ -1.74
TNFRSF1A-206ENST00000535038 CENPEQ02224 2701 aa4.19□□□□□ -1.74
TNFRSF1A-206ENST00000535038 TRBV20-1A0A075B6N2 111 aa4.18□□□□□ -1.74
TNFRSF1A-206ENST00000535038 A0A087WYN8 130 aa4.18□□□□□ -1.74
TNFRSF1A-206ENST00000535038 PLAC8L1A1L4L8 177 aa4.18□□□□□ -1.74
TNFRSF1A-206ENST00000535038 A4D1N5 150 aa4.18□□□□□ -1.74
TNFRSF1A-206ENST00000535038 TIMM17BO60830 172 aa4.18□□□□□ -1.74
TNFRSF1A-206ENST00000535038 TCL1BO95988 128 aa4.18□□□□□ -1.74
TNFRSF1A-206ENST00000535038 AZU1P20160 251 aa4.18□□□□□ -1.74
TNFRSF1A-206ENST00000535038 SCGB2A2Q13296 93 aa4.18□□□□□ -1.74
TNFRSF1A-206ENST00000535038 ETDBQ3ZM63 59 aa4.18□□□□□ -1.74
TNFRSF1A-206ENST00000535038 ZFAND6Q6FIF0 208 aa4.18□□□□□ -1.74
TNFRSF1A-206ENST00000535038 CEMP1Q6PRD7 247 aaPredicted RBP4.18□□□□□ -1.74
TNFRSF1A-206ENST00000535038 Q6ZUT4 128 aa4.18□□□□□ -1.74
TNFRSF1A-206ENST00000535038 MUSTN1Q8IVN3 82 aa4.18□□□□□ -1.74
TNFRSF1A-206ENST00000535038 CARD19Q96LW7 228 aa4.18□□□□□ -1.74
TNFRSF1A-206ENST00000535038 LINC01587Q99440 93 aa4.18□□□□□ -1.74
TNFRSF1A-206ENST00000535038 FAM110AQ9BQ89 295 aa4.18□□□□□ -1.74
TNFRSF1A-206ENST00000535038 C1QTNF4Q9BXJ3 329 aa4.18□□□□□ -1.74
TNFRSF1A-206ENST00000535038 MRPL16Q9NX20 251 aaKnown RBP4.18□□□□□ -1.74
TNFRSF1A-206ENST00000535038 CSDC2Q9Y534 153 aaKnown RBP4.18□□□□□ -1.74
TNFRSF1A-206ENST00000535038 TLN2Q9Y4G6 2542 aa4.18□□□□□ -1.74
TNFRSF1A-206ENST00000535038 IGHV3OR16-12A0A075B7B8 117 aa4.17□□□□□ -1.74
TNFRSF1A-206ENST00000535038 IGHV3-73A0A0B4J1V6 119 aa4.17□□□□□ -1.74
TNFRSF1A-206ENST00000535038 TRBV10-1A0A0K0K1A3 114 aa4.17□□□□□ -1.74
TNFRSF1A-206ENST00000535038 GAGE12JA6NER3 117 aa4.17□□□□□ -1.74
TNFRSF1A-206ENST00000535038 TMEM238C9JI98 176 aa4.17□□□□□ -1.74
TNFRSF1A-206ENST00000535038 APOMO95445 188 aa4.17□□□□□ -1.74
TNFRSF1A-206ENST00000535038 LINC00694P0DN24 101 aa4.17□□□□□ -1.74
TNFRSF1A-206ENST00000535038 SCGB1A1P11684 91 aa4.17□□□□□ -1.74
TNFRSF1A-206ENST00000535038 INSL3P51460 131 aa4.17□□□□□ -1.74
TNFRSF1A-206ENST00000535038 RPL24P83731 157 aaKnown RBP4.17□□□□□ -1.74
TNFRSF1A-206ENST00000535038 DAZ2Q13117 558 aaKnown RBP4.17□□□□□ -1.74
TNFRSF1A-206ENST00000535038 COTL1Q14019 142 aa4.17□□□□□ -1.74
TNFRSF1A-206ENST00000535038 ADAMTSL4-AS1Q5T5F5 129 aa4.17□□□□□ -1.74
TNFRSF1A-206ENST00000535038 LYRM7Q5U5X0 104 aa4.17□□□□□ -1.74
TNFRSF1A-206ENST00000535038 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.17□□□□□ -1.74
TNFRSF1A-206ENST00000535038 WFDC11Q8NEX6 87 aa4.17□□□□□ -1.74
TNFRSF1A-206ENST00000535038 DYNLRB2Q8TF09 96 aa4.17□□□□□ -1.74
TNFRSF1A-206ENST00000535038 PPDPFQ9H3Y8 114 aa4.17□□□□□ -1.74
TNFRSF1A-206ENST00000535038 EPG5Q9HCE0 2579 aa4.17□□□□□ -1.74
TNFRSF1A-206ENST00000535038 PDZD2O15018 2839 aa4.16□□□□□ -1.74
TNFRSF1A-206ENST00000535038 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.16□□□□□ -1.74
TNFRSF1A-206ENST00000535038 TRAV8-3A0A0A6YYJ7 113 aa4.16□□□□□ -1.74
TNFRSF1A-206ENST00000535038 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.16□□□□□ -1.74
TNFRSF1A-206ENST00000535038 TRAV4A0A0B4J268 109 aa4.16□□□□□ -1.74
TNFRSF1A-206ENST00000535038 TRBV30A0A0K0K1B3 111 aa4.16□□□□□ -1.74
TNFRSF1A-206ENST00000535038 IGKV2-29A2NJV5 120 aaPredicted RBP4.16□□□□□ -1.74
TNFRSF1A-206ENST00000535038 CCL24O00175 119 aa4.16□□□□□ -1.74
TNFRSF1A-206ENST00000535038 NDUFA1O15239 70 aa4.16□□□□□ -1.74
TNFRSF1A-206ENST00000535038 CMC4P56277 68 aaPredicted RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms