RNA–Protein interactions for RNA: ENST00000534284.1

CYCSP28-201, Transcript of cytochrome c, somatic pseudogene 28, humanhuman

BASIC

Gene CYCSP28, Length 321 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP28-201ENST00000534284 TEN1Q86WV5 123 aa3.39□□□□□ -1.87
CYCSP28-201ENST00000534284 SBSPONQ8IVN8 264 aa3.39□□□□□ -1.87
CYCSP28-201ENST00000534284 ARL17AQ8IVW1 177 aa3.39□□□□□ -1.87
CYCSP28-201ENST00000534284 Q8N2B8 174 aa3.39□□□□□ -1.87
CYCSP28-201ENST00000534284 TMEM86BQ8N661 226 aa3.39□□□□□ -1.87
CYCSP28-201ENST00000534284 Q8NBF4 154 aa3.39□□□□□ -1.87
CYCSP28-201ENST00000534284 LINC01600Q96MT4 127 aa3.39□□□□□ -1.87
CYCSP28-201ENST00000534284 LITAFQ99732 161 aa3.39□□□□□ -1.87
CYCSP28-201ENST00000534284 CHCHD5Q9BSY4 110 aa3.39□□□□□ -1.87
CYCSP28-201ENST00000534284 TIMM21Q9BVV7 248 aa3.39□□□□□ -1.87
CYCSP28-201ENST00000534284 PPDPFQ9H3Y8 114 aa3.39□□□□□ -1.87
CYCSP28-201ENST00000534284 ERG28Q9UKR5 140 aa3.39□□□□□ -1.87
CYCSP28-201ENST00000534284 MUC4Q99102 2169 aa3.39□□□□□ -1.87
CYCSP28-201ENST00000534284 MYO9AB2RTY4 2548 aa3.39□□□□□ -1.87
CYCSP28-201ENST00000534284 USP9YO00507 2555 aaPredicted RBP3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 IGLV4-3A0A075B6K6 122 aa3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 TINCRA0A1B0GVN0 87 aa3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 INSP01308 110 aa3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 SCGB1C2P0DMR2 95 aa3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 CD28P10747 220 aa3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 ZNF22P17026 224 aaPredicted RBP3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 PSMB2P49721 201 aa3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 SEC61GP60059 68 aa3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 CIRBPQ14011 172 aaKnown RBP3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 ATXN8Q156A1 80 aa3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 DEFB112Q30KQ8 113 aa3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 ETDBQ3ZM63 59 aa3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 AMTNQ6UX39 209 aa3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 Q6ZQT7 251 aa3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 C18orf65Q6ZTR6 163 aa3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 NOTCH2NLQ7Z3S9 236 aa3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 C4orf3Q8WVX3 66 aa3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 AMELXQ99217 191 aa3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 SPANXDQ9BXN6 97 aa3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 OCR1Q9BZK8 76 aa3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 SPANXCQ9NY87 97 aa3.38□□□□□ -1.87
CYCSP28-201ENST00000534284 DCHS2Q6V1P9 2916 aa3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 USP9XQ93008 2570 aaPredicted RBP3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 ANKRD17O75179 2603 aaKnown RBP3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 IGHV1-58A0A0C4DH39 117 aa3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 TRBV10-1A0A0K0K1A3 114 aa3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 TRBV30A0A0K0K1B3 111 aa3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 IGHV3-53P01767 116 aa3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 CFC1BP0CG36 223 aa3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 CFC1P0CG37 223 aa3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 AZU1P20160 251 aa3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 RPL13AP40429 203 aaKnown RBP3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 SYNJ2BPP57105 145 aa3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 KRTAP10-9P60411 292 aa3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 RPL39P62891 51 aaKnown RBP3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 SPINK13Q1W4C9 94 aa3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 ZNRF2Q8NHG8 242 aa3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 DYNLRB2Q8TF09 96 aa3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 JPT2Q9H910 190 aa3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 ZNF702PQ9H963 129 aa3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 TSSC4Q9Y5U2 329 aaPredicted RBP3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 ITPR1Q14643 2758 aa3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 SPENQ96T58 3664 aaKnown RBP3.37□□□□□ -1.87
CYCSP28-201ENST00000534284 LRRK2Q5S007 2527 aa3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 A0A096LNT2 108 aa3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 H3BMM0 161 aa3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 H3BT86 120 aa3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 IGHV3-33P01772 117 aa3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 IGHV3-30-3P0DP02 117 aa3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 DEFB1P60022 68 aa3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 HERVK_113P63121 156 aa3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 MRPL23Q16540 153 aaKnown RBP3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 MIAQ16674 131 aa3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 LINC00242Q5T6M2 205 aa3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 SH2D6Q7Z4S9 175 aa3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 LINC01561Q8N1V8 128 aa3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 KLHL30-AS1Q8NEE0 82 aa3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 TMEM263Q8WUH6 116 aaKnown RBP3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 VSIG2Q96IQ7 327 aa3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 GTSF1LQ9H1H1 148 aa3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 GEMIN7Q9H840 131 aaKnown RBP3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 NDUFA12Q9UI09 145 aa3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 CSDC2Q9Y534 153 aaKnown RBP3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 PRRC2AP48634 2157 aaKnown RBP3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 NAV2Q8IVL1 2488 aa3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 DOPEY2Q9Y3R5 2298 aa3.36□□□□□ -1.87
CYCSP28-201ENST00000534284 CFAP46Q8IYW2 2715 aa3.35□□□□□ -1.87
CYCSP28-201ENST00000534284 BSNQ9UPA5 3926 aa3.35□□□□□ -1.87
CYCSP28-201ENST00000534284 FLNCQ14315 2725 aa3.35□□□□□ -1.87
CYCSP28-201ENST00000534284 TRAV12-2A0A075B6T6 113 aa3.35□□□□□ -1.87
CYCSP28-201ENST00000534284 A0A0J9YXV3 536 aa3.35□□□□□ -1.87
CYCSP28-201ENST00000534284 RPL37AP8A6NKH3 93 aa3.35□□□□□ -1.87
CYCSP28-201ENST00000534284 H7C423 109 aa3.35□□□□□ -1.87
CYCSP28-201ENST00000534284 NDUFA1O15239 70 aa3.35□□□□□ -1.87
CYCSP28-201ENST00000534284 RS1O15537 224 aa3.35□□□□□ -1.87
CYCSP28-201ENST00000534284 SLC25A20O43772 301 aa3.35□□□□□ -1.87
CYCSP28-201ENST00000534284 TCL1BO95988 128 aa3.35□□□□□ -1.87
CYCSP28-201ENST00000534284 IGKV3-20P01619 116 aa3.35□□□□□ -1.87
CYCSP28-201ENST00000534284 TSPEAR-AS2P59090 65 aa3.35□□□□□ -1.87
CYCSP28-201ENST00000534284 DEFB131AP59861 70 aa3.35□□□□□ -1.87
CYCSP28-201ENST00000534284 DAZ2Q13117 558 aaKnown RBP3.35□□□□□ -1.87
CYCSP28-201ENST00000534284 Q1RN00 199 aa3.35□□□□□ -1.87
CYCSP28-201ENST00000534284 ZFAND6Q6FIF0 208 aa3.35□□□□□ -1.87
CYCSP28-201ENST00000534284 SFTA2Q6UW10 78 aa3.35□□□□□ -1.87
CYCSP28-201ENST00000534284 FAM19A3Q7Z5A8 133 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms