RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 Q6ZSV7 163 aa14.15□□□□□ -0.14
CAPN1-226ENST00000533820 NIPBLQ6KC79 2804 aaeCLIP14.14□□□□□ -0.15
CAPN1-226ENST00000533820 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.14□□□□□ -0.15
CAPN1-226ENST00000533820 IGKV2-29A2NJV5 120 aaPredicted RBP14.14□□□□□ -0.15
CAPN1-226ENST00000533820 IGHV3-33P01772 117 aa14.14□□□□□ -0.15
CAPN1-226ENST00000533820 C4orf26Q17RF5 130 aa14.14□□□□□ -0.15
CAPN1-226ENST00000533820 LRRC75A-AS1Q8N1F1 130 aa14.14□□□□□ -0.15
CAPN1-226ENST00000533820 C3orf22Q8N5N4 141 aa14.14□□□□□ -0.15
CAPN1-226ENST00000533820 H3BMM0 161 aa14.13□□□□□ -0.15
CAPN1-226ENST00000533820 HRCT1Q6UXD1 115 aa14.13□□□□□ -0.15
CAPN1-226ENST00000533820 UBE2WQ96B02 151 aa14.13□□□□□ -0.15
CAPN1-226ENST00000533820 TIMM21Q9BVV7 248 aa14.13□□□□□ -0.15
CAPN1-226ENST00000533820 A0A0J9YXY3 114 aa14.13□□□□□ -0.15
CAPN1-226ENST00000533820 TMEM263Q8WUH6 116 aaKnown RBP14.13□□□□□ -0.15
CAPN1-226ENST00000533820 DAND5Q8N907 189 aa14.11□□□□□ -0.15
CAPN1-226ENST00000533820 LINC01620Q4KN68 170 aa14.11□□□□□ -0.15
CAPN1-226ENST00000533820 ADAMTSL4-AS1Q5T5F5 129 aa14.11□□□□□ -0.15
CAPN1-226ENST00000533820 FAM104AQ969W3 186 aa14.1□□□□□ -0.15
CAPN1-226ENST00000533820 M0R2P5 195 aa14.1□□□□□ -0.15
CAPN1-226ENST00000533820 IGHV3OR16-12A0A075B7B8 117 aa14.09□□□□□ -0.15
CAPN1-226ENST00000533820 RBMY1BA6NDE4 496 aaKnown RBP14.09□□□□□ -0.15
CAPN1-226ENST00000533820 RBMY1EA6NEQ0 496 aaKnown RBP14.09□□□□□ -0.15
CAPN1-226ENST00000533820 RBMY1DP0C7P1 496 aaKnown RBP14.09□□□□□ -0.15
CAPN1-226ENST00000533820 A0A0U1RRA0 63 aa14.09□□□□□ -0.15
CAPN1-226ENST00000533820 KIR2DL5BQ8NHK3 375 aa14.09□□□□□ -0.15
CAPN1-226ENST00000533820 GAGE2AQ6NT46 116 aa14.08□□□□□ -0.16
CAPN1-226ENST00000533820 C2orf82Q6UX34 121 aa14.08□□□□□ -0.16
CAPN1-226ENST00000533820 NDUFA12Q9UI09 145 aa14.08□□□□□ -0.16
CAPN1-226ENST00000533820 TMEM61Q8N0U2 210 aa14.08□□□□□ -0.16
CAPN1-226ENST00000533820 LINC01356Q8N9X3 169 aa14.07□□□□□ -0.16
CAPN1-226ENST00000533820 ZNF625Q96I27 306 aaPredicted RBP14.06□□□□□ -0.16
CAPN1-226ENST00000533820 LINC00467Q9BRT7 94 aa14.06□□□□□ -0.16
CAPN1-226ENST00000533820 UQCRQO14949 82 aa14.05□□□□□ -0.16
CAPN1-226ENST00000533820 TRIAP1O43715 76 aa14.05□□□□□ -0.16
CAPN1-226ENST00000533820 C11orf44Q8N8P7 122 aa14.05□□□□□ -0.16
CAPN1-226ENST00000533820 ZNF702PQ9H963 129 aa14.05□□□□□ -0.16
CAPN1-226ENST00000533820 hADV29S1A0JD25 119 aa14.04□□□□□ -0.16
CAPN1-226ENST00000533820 ATXN8Q156A1 80 aa14.04□□□□□ -0.16
CAPN1-226ENST00000533820 CITED2Q99967 270 aaPredicted RBP14.04□□□□□ -0.16
CAPN1-226ENST00000533820 A0A0B4J2C4 111 aa14.03□□□□□ -0.16
CAPN1-226ENST00000533820 UBE2E2Q96LR5 201 aa14.03□□□□□ -0.16
CAPN1-226ENST00000533820 CYSTM1Q9H1C7 97 aa14.03□□□□□ -0.16
CAPN1-226ENST00000533820 XCL2Q9UBD3 114 aa14.03□□□□□ -0.16
CAPN1-226ENST00000533820 RPL13AP40429 203 aaKnown RBP14.03□□□□□ -0.16
CAPN1-226ENST00000533820 MRPS36P82909 103 aaKnown RBP14.03□□□□□ -0.16
CAPN1-226ENST00000533820 LITAFQ99732 161 aa14.03□□□□□ -0.16
CAPN1-226ENST00000533820 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.02□□□□□ -0.16
CAPN1-226ENST00000533820 A0A1B0GX51 115 aa14.02□□□□□ -0.16
CAPN1-226ENST00000533820 LINC00526Q96FQ7 95 aa14.02□□□□□ -0.16
CAPN1-226ENST00000533820 CHCHD7Q9BUK0 85 aa14.02□□□□□ -0.16
CAPN1-226ENST00000533820 MTORP42345 2549 aa14.02□□□□□ -0.17
CAPN1-226ENST00000533820 IGHV1-58A0A0C4DH39 117 aa14.02□□□□□ -0.17
CAPN1-226ENST00000533820 CLEC2BQ92478 149 aa14.02□□□□□ -0.17
CAPN1-226ENST00000533820 TRBV7-7A0A0K0K1E9 115 aa14.01□□□□□ -0.17
CAPN1-226ENST00000533820 TRBV10-2A0A0K0K1G8 114 aa14.01□□□□□ -0.17
CAPN1-226ENST00000533820 DSCR8Q96T75 97 aa14.01□□□□□ -0.17
CAPN1-226ENST00000533820 CDKN2A-AS1Q9UH64 79 aa14.01□□□□□ -0.17
CAPN1-226ENST00000533820 DGAT2L7PQ6IED9 249 aa14.01□□□□□ -0.17
CAPN1-226ENST00000533820 UBE2D4Q9Y2X8 147 aa14.01□□□□□ -0.17
CAPN1-226ENST00000533820 IGHV3-53P01767 116 aa14□□□□□ -0.17
CAPN1-226ENST00000533820 DYNLRB2Q8TF09 96 aa14□□□□□ -0.17
CAPN1-226ENST00000533820 VSIG2Q96IQ7 327 aa14□□□□□ -0.17
CAPN1-226ENST00000533820 PRB1P04280 392 aa14□□□□□ -0.17
CAPN1-226ENST00000533820 PYGO1Q9Y3Y4 419 aa14□□□□□ -0.17
CAPN1-226ENST00000533820 ZNF415Q09FC8 603 aa13.99□□□□□ -0.17
CAPN1-226ENST00000533820 OXTP01178 125 aa13.99□□□□□ -0.17
CAPN1-226ENST00000533820 ACANP16112 2415 aa13.98□□□□□ -0.17
CAPN1-226ENST00000533820 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.98□□□□□ -0.17
CAPN1-226ENST00000533820 A0A1W2PRX2 142 aa13.97□□□□□ -0.17
CAPN1-226ENST00000533820 ICOSQ9Y6W8 199 aa13.97□□□□□ -0.17
CAPN1-226ENST00000533820 TMEM89A2RUT3 159 aa13.97□□□□□ -0.17
CAPN1-226ENST00000533820 H7C423 109 aa13.97□□□□□ -0.17
CAPN1-226ENST00000533820 MAP6D1Q9H9H5 199 aa13.97□□□□□ -0.17
CAPN1-226ENST00000533820 FN1P02751 2386 aaKnown RBP13.97□□□□□ -0.17
CAPN1-226ENST00000533820 Q6YL49 198 aa13.96□□□□□ -0.17
CAPN1-226ENST00000533820 COX6A2Q02221 97 aa13.96□□□□□ -0.17
CAPN1-226ENST00000533820 RNF152Q8N8N0 203 aa13.96□□□□□ -0.18
CAPN1-226ENST00000533820 TINCRA0A1B0GVN0 87 aa13.95□□□□□ -0.18
CAPN1-226ENST00000533820 KRTAP10-9P60411 292 aa13.95□□□□□ -0.18
CAPN1-226ENST00000533820 SETXQ7Z333 2677 aaKnown RBP13.94□□□□□ -0.18
CAPN1-226ENST00000533820 TRAV13-1A0A0B4J241 112 aa13.94□□□□□ -0.18
CAPN1-226ENST00000533820 RS1O15537 224 aa13.94□□□□□ -0.18
CAPN1-226ENST00000533820 MIAQ16674 131 aa13.94□□□□□ -0.18
CAPN1-226ENST00000533820 A0A096LNT2 108 aa13.94□□□□□ -0.18
CAPN1-226ENST00000533820 TRGV1A0A0A0MS02 117 aa13.94□□□□□ -0.18
CAPN1-226ENST00000533820 COX7CP15954 63 aa13.94□□□□□ -0.18
CAPN1-226ENST00000533820 DSCR9P59020 149 aa13.94□□□□□ -0.18
CAPN1-226ENST00000533820 C11orf72Q8NBR9 251 aa13.93□□□□□ -0.18
CAPN1-226ENST00000533820 DPH3Q96FX2 82 aa13.93□□□□□ -0.18
CAPN1-226ENST00000533820 TRBV30A0A0K0K1B3 111 aa13.93□□□□□ -0.18
CAPN1-226ENST00000533820 SMCR5Q8TEV8 140 aa13.93□□□□□ -0.18
CAPN1-226ENST00000533820 RPS28P62857 69 aaKnown RBP13.92□□□□□ -0.18
CAPN1-226ENST00000533820 C1orf43Q9BWL3 253 aa13.92□□□□□ -0.18
CAPN1-226ENST00000533820 TRACP01848 142 aa13.92□□□□□ -0.18
CAPN1-226ENST00000533820 ITPR3Q14573 2671 aa13.92□□□□□ -0.18
CAPN1-226ENST00000533820 ZNF469Q96JG9 3925 aaPredicted RBP13.92□□□□□ -0.18
CAPN1-226ENST00000533820 Q9H8V8 135 aa13.92□□□□□ -0.18
CAPN1-226ENST00000533820 PKIGQ9Y2B9 76 aa13.91□□□□□ -0.18
CAPN1-226ENST00000533820 FLNAP21333 2647 aaKnown RBP13.91□□□□□ -0.18
CAPN1-226ENST00000533820 USP24Q9UPU5 2620 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms