RNA–Protein interactions for RNA: ENST00000533252.1

CASP4-211, Transcript of caspase 4, humanhuman

TSL 3

Gene CASP4, Length 215 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-211ENST00000533252 Q8N814 137 aa3.1□□□□□ -1.91
CASP4-211ENST00000533252 UBE2WQ96B02 151 aa3.1□□□□□ -1.91
CASP4-211ENST00000533252 BORCS7Q96B45 105 aa3.1□□□□□ -1.91
CASP4-211ENST00000533252 TVP23CQ96ET8 276 aa3.1□□□□□ -1.91
CASP4-211ENST00000533252 DPH3P1Q9H4G8 78 aa3.1□□□□□ -1.91
CASP4-211ENST00000533252 MANBALQ9NQG1 85 aa3.1□□□□□ -1.91
CASP4-211ENST00000533252 KLK12Q9UKR0 248 aa3.1□□□□□ -1.91
CASP4-211ENST00000533252 CSDC2Q9Y534 153 aaKnown RBP3.1□□□□□ -1.91
CASP4-211ENST00000533252 TRBV25-1A0A075B6N4 114 aa3.09□□□□□ -1.91
CASP4-211ENST00000533252 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.09□□□□□ -1.91
CASP4-211ENST00000533252 HMSDA8MTL9 139 aa3.09□□□□□ -1.91
CASP4-211ENST00000533252 LTAP01374 205 aa3.09□□□□□ -1.91
CASP4-211ENST00000533252 P01737 135 aa3.09□□□□□ -1.91
CASP4-211ENST00000533252 RNASE3P12724 160 aaKnown RBP3.09□□□□□ -1.91
CASP4-211ENST00000533252 GNG4P50150 75 aa3.09□□□□□ -1.91
CASP4-211ENST00000533252 ZNF80P51504 273 aaPredicted RBP3.09□□□□□ -1.91
CASP4-211ENST00000533252 SMAGPQ0VAQ4 97 aa3.09□□□□□ -1.91
CASP4-211ENST00000533252 ZNF345Q14585 488 aa3.09□□□□□ -1.91
CASP4-211ENST00000533252 RNASEKQ6P5S7 137 aaKnown RBP3.09□□□□□ -1.91
CASP4-211ENST00000533252 TEX261Q6UWH6 196 aa3.09□□□□□ -1.91
CASP4-211ENST00000533252 Q86TA4 180 aa3.09□□□□□ -1.91
CASP4-211ENST00000533252 MBD3L1Q8WWY6 194 aa3.09□□□□□ -1.91
CASP4-211ENST00000533252 DNAJC30Q96LL9 226 aa3.09□□□□□ -1.91
CASP4-211ENST00000533252 AP1S3Q96PC3 154 aa3.09□□□□□ -1.91
CASP4-211ENST00000533252 PKIGQ9Y2B9 76 aa3.09□□□□□ -1.91
CASP4-211ENST00000533252 MUC4Q99102 2169 aa3.09□□□□□ -1.91
CASP4-211ENST00000533252 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.08□□□□□ -1.92
CASP4-211ENST00000533252 TRBV6-8A0A0A6YYG3 113 aa3.08□□□□□ -1.92
CASP4-211ENST00000533252 TRAV8-4A0A0B4J246 113 aa3.08□□□□□ -1.92
CASP4-211ENST00000533252 IGHV1-24A0A0C4DH33 117 aa3.08□□□□□ -1.92
CASP4-211ENST00000533252 A0A1B0GV50 99 aa3.08□□□□□ -1.92
CASP4-211ENST00000533252 H0Y8G0 127 aa3.08□□□□□ -1.92
CASP4-211ENST00000533252 SMR3BP02814 79 aaPredicted RBP3.08□□□□□ -1.92
CASP4-211ENST00000533252 MGPP08493 103 aa3.08□□□□□ -1.92
CASP4-211ENST00000533252 CXCL1P09341 107 aa3.08□□□□□ -1.92
CASP4-211ENST00000533252 GZMBP10144 247 aa3.08□□□□□ -1.92
CASP4-211ENST00000533252 MIAQ16674 131 aa3.08□□□□□ -1.92
CASP4-211ENST00000533252 Q5VSD8 79 aa3.08□□□□□ -1.92
CASP4-211ENST00000533252 AMMECR1LQ6DCA0 310 aa3.08□□□□□ -1.92
CASP4-211ENST00000533252 Q6ZRN7 208 aaPredicted RBP3.08□□□□□ -1.92
CASP4-211ENST00000533252 NIT1Q86X76 327 aa3.08□□□□□ -1.92
CASP4-211ENST00000533252 DEFB104AQ8WTQ1 72 aa3.08□□□□□ -1.92
CASP4-211ENST00000533252 BAALCQ8WXS3 180 aa3.08□□□□□ -1.92
CASP4-211ENST00000533252 SMIM12Q96EX1 92 aa3.08□□□□□ -1.92
CASP4-211ENST00000533252 RNF185Q96GF1 192 aa3.08□□□□□ -1.92
CASP4-211ENST00000533252 ZC2HC1AQ96GY0 325 aa3.08□□□□□ -1.92
CASP4-211ENST00000533252 DERL1Q9BUN8 251 aa3.08□□□□□ -1.92
CASP4-211ENST00000533252 MED9Q9NWA0 146 aa3.08□□□□□ -1.92
CASP4-211ENST00000533252 ANAPC11Q9NYG5 84 aa3.08□□□□□ -1.92
CASP4-211ENST00000533252 GNG13Q9P2W3 67 aa3.08□□□□□ -1.92
CASP4-211ENST00000533252 KMT2AQ03164 3969 aa3.07□□□□□ -1.92
CASP4-211ENST00000533252 LECT2O14960 151 aa3.07□□□□□ -1.92
CASP4-211ENST00000533252 OR5AL1P0C617 328 aa3.07□□□□□ -1.92
CASP4-211ENST00000533252 SULT1A2P50226 295 aa3.07□□□□□ -1.92
CASP4-211ENST00000533252 COTL1Q14019 142 aa3.07□□□□□ -1.92
CASP4-211ENST00000533252 Q5BKY6 102 aa3.07□□□□□ -1.92
CASP4-211ENST00000533252 LINC00173Q6ZV60 143 aa3.07□□□□□ -1.92
CASP4-211ENST00000533252 FER1L6-AS1Q8NA97 138 aa3.07□□□□□ -1.92
CASP4-211ENST00000533252 OR2D3Q8NGH3 330 aa3.07□□□□□ -1.92
CASP4-211ENST00000533252 BTF3L4Q96K17 158 aa3.07□□□□□ -1.92
CASP4-211ENST00000533252 FAM210AQ96ND0 272 aa3.07□□□□□ -1.92
CASP4-211ENST00000533252 SAMD10Q9BYL1 202 aa3.07□□□□□ -1.92
CASP4-211ENST00000533252 LRCOL1A6NCL2 159 aa3.06□□□□□ -1.92
CASP4-211ENST00000533252 HLA-DQA1P01909 254 aa3.06□□□□□ -1.92
CASP4-211ENST00000533252 RPL35P42766 123 aaKnown RBP3.06□□□□□ -1.92
CASP4-211ENST00000533252 KRTAP10-1P60331 282 aa3.06□□□□□ -1.92
CASP4-211ENST00000533252 UBE2D3P61077 147 aa3.06□□□□□ -1.92
CASP4-211ENST00000533252 UBE2D2P62837 147 aa3.06□□□□□ -1.92
CASP4-211ENST00000533252 CCL20P78556 96 aa3.06□□□□□ -1.92
CASP4-211ENST00000533252 MEF2BQ02080 365 aaPredicted RBP3.06□□□□□ -1.92
CASP4-211ENST00000533252 ZNF726P1Q15940 193 aa3.06□□□□□ -1.92
CASP4-211ENST00000533252 RASL11AQ6T310 242 aa3.06□□□□□ -1.92
CASP4-211ENST00000533252 SLC51BQ86UW2 128 aa3.06□□□□□ -1.92
CASP4-211ENST00000533252 TMEM243Q9BU79 118 aa3.06□□□□□ -1.92
CASP4-211ENST00000533252 NIT2Q9NQR4 276 aa3.06□□□□□ -1.92
CASP4-211ENST00000533252 VAX2Q9UIW0 290 aa3.06□□□□□ -1.92
CASP4-211ENST00000533252 VPS13DQ5THJ4 4388 aa3.06□□□□□ -1.92
CASP4-211ENST00000533252 DNAH10Q8IVF4 4471 aa3.05□□□□□ -1.92
CASP4-211ENST00000533252 TRAV1-1A0A0B4J248 108 aa3.05□□□□□ -1.92
CASP4-211ENST00000533252 A8MWL6 223 aa3.05□□□□□ -1.92
CASP4-211ENST00000533252 PPP1R17O96001 155 aa3.05□□□□□ -1.92
CASP4-211ENST00000533252 PMCHP20382 165 aa3.05□□□□□ -1.92
CASP4-211ENST00000533252 CRIP1P50238 77 aa3.05□□□□□ -1.92
CASP4-211ENST00000533252 RPL19P84098 196 aaKnown RBP3.05□□□□□ -1.92
CASP4-211ENST00000533252 LINC00269Q8N2A0 174 aa3.05□□□□□ -1.92
CASP4-211ENST00000533252 EIF5A2Q9GZV4 153 aaKnown RBP3.05□□□□□ -1.92
CASP4-211ENST00000533252 CYTL1Q9NRR1 136 aa3.05□□□□□ -1.92
CASP4-211ENST00000533252 IGHV3-64A0A075B6Q5 118 aa3.04□□□□□ -1.92
CASP4-211ENST00000533252 MUC21A0A0G2JKD1 596 aa3.04□□□□□ -1.92
CASP4-211ENST00000533252 MUC21A0A140T8X8 626 aa3.04□□□□□ -1.92
CASP4-211ENST00000533252 KRTAP9-6A8MVA2 160 aa3.04□□□□□ -1.92
CASP4-211ENST00000533252 SNAI2O43623 268 aa3.04□□□□□ -1.92
CASP4-211ENST00000533252 GATCO43716 136 aaKnown RBP3.04□□□□□ -1.92
CASP4-211ENST00000533252 NTF3P20783 257 aa3.04□□□□□ -1.92
CASP4-211ENST00000533252 FUSP35637 526 aaKnown RBP eCLIP3.04□□□□□ -1.92
CASP4-211ENST00000533252 CEBPGP53567 150 aa3.04□□□□□ -1.92
CASP4-211ENST00000533252 CENPWQ5EE01 88 aa3.04□□□□□ -1.92
CASP4-211ENST00000533252 LYZL1Q6UWQ5 148 aa3.04□□□□□ -1.92
CASP4-211ENST00000533252 C9orf62Q8N4C0 152 aa3.04□□□□□ -1.92
CASP4-211ENST00000533252 OR10AG1Q8NH19 301 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms