RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 SIVA1O15304 175 aa9.59□□□□□ -0.87
HIF3A-215ENST00000533145 FABP4P15090 132 aa9.59□□□□□ -0.87
HIF3A-215ENST00000533145 MPV17L2Q567V2 206 aa9.59□□□□□ -0.87
HIF3A-215ENST00000533145 PAPPA-AS1Q5QFB9 102 aa9.59□□□□□ -0.87
HIF3A-215ENST00000533145 DGAT2L7PQ6IED9 249 aa9.59□□□□□ -0.87
HIF3A-215ENST00000533145 LINC00173Q6ZV60 143 aa9.59□□□□□ -0.87
HIF3A-215ENST00000533145 OR5A1Q8NGJ0 315 aa9.59□□□□□ -0.87
HIF3A-215ENST00000533145 LGALS9CQ6DKI2 356 aa9.58□□□□□ -0.88
HIF3A-215ENST00000533145 ZNF664Q8N3J9 261 aa9.58□□□□□ -0.88
HIF3A-215ENST00000533145 AMELXQ99217 191 aa9.58□□□□□ -0.88
HIF3A-215ENST00000533145 Q9H8V8 135 aa9.58□□□□□ -0.88
HIF3A-215ENST00000533145 STARD9Q9P2P6 4700 aa9.58□□□□□ -0.88
HIF3A-215ENST00000533145 K7EP13 123 aa9.57□□□□□ -0.88
HIF3A-215ENST00000533145 UBE2DNLQ8IWF7 75 aa9.57□□□□□ -0.88
HIF3A-215ENST00000533145 Q8N976 141 aa9.57□□□□□ -0.88
HIF3A-215ENST00000533145 OPRPNQ99935 248 aaPredicted RBP9.57□□□□□ -0.88
HIF3A-215ENST00000533145 PLECQ15149 4684 aaKnown RBP9.56□□□□□ -0.88
HIF3A-215ENST00000533145 Q6ZN92 141 aa9.56□□□□□ -0.88
HIF3A-215ENST00000533145 Q6ZUT4 128 aa9.56□□□□□ -0.88
HIF3A-215ENST00000533145 SPATA12Q7Z6I5 190 aa9.56□□□□□ -0.88
HIF3A-215ENST00000533145 BAALCQ8WXS3 180 aa9.56□□□□□ -0.88
HIF3A-215ENST00000533145 VCX2Q9H322 139 aa9.56□□□□□ -0.88
HIF3A-215ENST00000533145 TRAV12-1A0A0B4J245 112 aa9.55□□□□□ -0.88
HIF3A-215ENST00000533145 PMVKQ15126 192 aa9.55□□□□□ -0.88
HIF3A-215ENST00000533145 Q8N3U1 123 aa9.55□□□□□ -0.88
HIF3A-215ENST00000533145 MAP1LC3CQ9BXW4 147 aa9.55□□□□□ -0.88
HIF3A-215ENST00000533145 PRR34Q9NV39 138 aa9.55□□□□□ -0.88
HIF3A-215ENST00000533145 IGHV3-30P01768 117 aa9.54□□□□□ -0.88
HIF3A-215ENST00000533145 IGHV3-33P01772 117 aa9.54□□□□□ -0.88
HIF3A-215ENST00000533145 ANGP03950 147 aaKnown RBP9.54□□□□□ -0.88
HIF3A-215ENST00000533145 PRSS1P07477 247 aa9.54□□□□□ -0.88
HIF3A-215ENST00000533145 C3orf79P0CE67 100 aa9.54□□□□□ -0.88
HIF3A-215ENST00000533145 IGHV3-30-3P0DP02 117 aa9.54□□□□□ -0.88
HIF3A-215ENST00000533145 IGHV3-30-5P0DP03 117 aa9.54□□□□□ -0.88
HIF3A-215ENST00000533145 TEX43Q6ZNM6 134 aa9.54□□□□□ -0.88
HIF3A-215ENST00000533145 CST9LQ9H4G1 147 aa9.54□□□□□ -0.88
HIF3A-215ENST00000533145 TRAV9-2A0A087WT02 112 aa9.53□□□□□ -0.88
HIF3A-215ENST00000533145 SYS1-DBNDD2H3BUS1 97 aa9.53□□□□□ -0.88
HIF3A-215ENST00000533145 CCL25O15444 150 aa9.53□□□□□ -0.88
HIF3A-215ENST00000533145 PET117Q6UWS5 81 aa9.53□□□□□ -0.88
HIF3A-215ENST00000533145 C10orf126Q8N4M7 172 aa9.53□□□□□ -0.88
HIF3A-215ENST00000533145 KLK12Q9UKR0 248 aa9.53□□□□□ -0.88
HIF3A-215ENST00000533145 TENM2Q9NT68 2774 aa9.52□□□□□ -0.88
HIF3A-215ENST00000533145 PRSS29PA6NIE9 313 aa9.52□□□□□ -0.89
HIF3A-215ENST00000533145 IBA57-AS1B1ANH7 110 aa9.52□□□□□ -0.89
HIF3A-215ENST00000533145 FAM19A3Q7Z5A8 133 aa9.52□□□□□ -0.89
HIF3A-215ENST00000533145 LINC00269Q8N2A0 174 aa9.52□□□□□ -0.89
HIF3A-215ENST00000533145 C2orf88Q9BSF0 95 aa9.52□□□□□ -0.89
HIF3A-215ENST00000533145 UBE2D1P51668 147 aa9.51□□□□□ -0.89
HIF3A-215ENST00000533145 REG3AQ06141 175 aa9.51□□□□□ -0.89
HIF3A-215ENST00000533145 RNASE13Q5GAN3 156 aaKnown RBP9.51□□□□□ -0.89
HIF3A-215ENST00000533145 ZC2HC1BQ5TFG8 222 aa9.51□□□□□ -0.89
HIF3A-215ENST00000533145 ENHOQ6UWT2 76 aa9.51□□□□□ -0.89
HIF3A-215ENST00000533145 OR10D4PQ8NGN7 298 aa9.51□□□□□ -0.89
HIF3A-215ENST00000533145 LINC00476Q8WZB0 136 aa9.51□□□□□ -0.89
HIF3A-215ENST00000533145 LINC00959A0A1B0GUT2 108 aa9.5□□□□□ -0.89
HIF3A-215ENST00000533145 KRTDAPP60985 99 aa9.5□□□□□ -0.89
HIF3A-215ENST00000533145 ODF1Q14990 250 aa9.5□□□□□ -0.89
HIF3A-215ENST00000533145 TRAV8-4A0A0B4J246 113 aa9.49□□□□□ -0.89
HIF3A-215ENST00000533145 MIAQ16674 131 aa9.49□□□□□ -0.89
HIF3A-215ENST00000533145 LINC01545Q5VT33 79 aa9.49□□□□□ -0.89
HIF3A-215ENST00000533145 VPS13DQ5THJ4 4388 aa9.48□□□□□ -0.89
HIF3A-215ENST00000533145 LOC105371267A0A1B0GV96 52 aa9.48□□□□□ -0.89
HIF3A-215ENST00000533145 F8VRH5 84 aa9.48□□□□□ -0.89
HIF3A-215ENST00000533145 SEC11AP67812 179 aa9.48□□□□□ -0.89
HIF3A-215ENST00000533145 SS18Q15532 418 aa9.48□□□□□ -0.89
HIF3A-215ENST00000533145 TTC32Q5I0X7 151 aa9.48□□□□□ -0.89
HIF3A-215ENST00000533145 UBE2WQ96B02 151 aa9.48□□□□□ -0.89
HIF3A-215ENST00000533145 CHTOPQ9Y3Y2 248 aaKnown RBP9.48□□□□□ -0.89
HIF3A-215ENST00000533145 IGLV4-69A0A075B6H9 119 aa9.47□□□□□ -0.89
HIF3A-215ENST00000533145 TRAV8-3A0A0A6YYJ7 113 aa9.47□□□□□ -0.89
HIF3A-215ENST00000533145 TRAV13-1A0A0B4J241 112 aa9.47□□□□□ -0.89
HIF3A-215ENST00000533145 NBDYA0A0U1RRE5 68 aa9.47□□□□□ -0.89
HIF3A-215ENST00000533145 TINCRA0A1B0GVN0 87 aa9.47□□□□□ -0.89
HIF3A-215ENST00000533145 LY6G6CO95867 125 aa9.47□□□□□ -0.89
HIF3A-215ENST00000533145 CRPP02741 224 aa9.47□□□□□ -0.89
HIF3A-215ENST00000533145 IGLC3P0DOY3 106 aa9.47□□□□□ -0.89
HIF3A-215ENST00000533145 LINC00242Q5T6M2 205 aa9.47□□□□□ -0.89
HIF3A-215ENST00000533145 NFE4Q86UQ8 179 aa9.47□□□□□ -0.89
HIF3A-215ENST00000533145 MRPL35Q9NZE8 188 aaKnown RBP9.47□□□□□ -0.89
HIF3A-215ENST00000533145 H0Y8G0 127 aa9.46□□□□□ -0.9
HIF3A-215ENST00000533145 AKR1D1P51857 326 aa9.46□□□□□ -0.9
HIF3A-215ENST00000533145 CLPSL2Q6UWE3 100 aa9.46□□□□□ -0.9
HIF3A-215ENST00000533145 KRTAP1-5Q9BYS1 174 aa9.46□□□□□ -0.9
HIF3A-215ENST00000533145 IGKV3OR2-268A0A0C4DH90 116 aa9.45□□□□□ -0.9
HIF3A-215ENST00000533145 A0A0J9YXV3 536 aa9.45□□□□□ -0.9
HIF3A-215ENST00000533145 C20orf202A1L168 122 aa9.45□□□□□ -0.9
HIF3A-215ENST00000533145 HERVK_113P63121 156 aa9.45□□□□□ -0.9
HIF3A-215ENST00000533145 JOSD1Q15040 202 aaPredicted RBP9.45□□□□□ -0.9
HIF3A-215ENST00000533145 Q6ZR54 194 aa9.45□□□□□ -0.9
HIF3A-215ENST00000533145 KRTAP17-1Q9BYP8 105 aa9.45□□□□□ -0.9
HIF3A-215ENST00000533145 IGLV5-45A0A087WSX0 123 aa9.44□□□□□ -0.9
HIF3A-215ENST00000533145 DPM2O94777 84 aa9.44□□□□□ -0.9
HIF3A-215ENST00000533145 PLNP26678 52 aa9.44□□□□□ -0.9
HIF3A-215ENST00000533145 COX6A2Q02221 97 aa9.44□□□□□ -0.9
HIF3A-215ENST00000533145 KRTAP26-1Q6PEX3 210 aa9.44□□□□□ -0.9
HIF3A-215ENST00000533145 CD164L2Q6UWJ8 174 aa9.44□□□□□ -0.9
HIF3A-215ENST00000533145 CHCHD10Q8WYQ3 142 aaPredicted RBP9.44□□□□□ -0.9
HIF3A-215ENST00000533145 LYSTQ99698 3801 aa9.43□□□□□ -0.9
HIF3A-215ENST00000533145 EPPK1P58107 5090 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms