RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 ESDP10768 282 aa8.66□□□□□ -1.02
TRAPPC4-212ENST00000533058 IFI27P40305 119 aaPredicted RBP8.66□□□□□ -1.02
TRAPPC4-212ENST00000533058 LINC00269Q8N2A0 174 aa8.66□□□□□ -1.02
TRAPPC4-212ENST00000533058 OR5A1Q8NGJ0 315 aa8.66□□□□□ -1.02
TRAPPC4-212ENST00000533058 IGLV4-60A0A075B6I1 120 aa8.65□□□□□ -1.02
TRAPPC4-212ENST00000533058 IGKV3OR2-268A0A0C4DH90 116 aa8.65□□□□□ -1.02
TRAPPC4-212ENST00000533058 A0A1B0GUV1 79 aa8.65□□□□□ -1.02
TRAPPC4-212ENST00000533058 Q0VG73 95 aa8.65□□□□□ -1.02
TRAPPC4-212ENST00000533058 FA2HQ7L5A8 372 aa8.65□□□□□ -1.02
TRAPPC4-212ENST00000533058 C20orf203Q8NBC4 194 aa8.65□□□□□ -1.02
TRAPPC4-212ENST00000533058 RMI2Q96E14 147 aa8.65□□□□□ -1.02
TRAPPC4-212ENST00000533058 IGKV2D-24A0A075B6R9 120 aa8.64□□□□□ -1.03
TRAPPC4-212ENST00000533058 COLCA2A8K830 154 aa8.64□□□□□ -1.03
TRAPPC4-212ENST00000533058 ZNF25P17030 456 aaPredicted RBP8.64□□□□□ -1.03
TRAPPC4-212ENST00000533058 ORMDL2Q53FV1 153 aa8.64□□□□□ -1.03
TRAPPC4-212ENST00000533058 TM2D2Q9BX73 214 aa8.64□□□□□ -1.03
TRAPPC4-212ENST00000533058 DNAH5Q8TE73 4624 aa8.64□□□□□ -1.03
TRAPPC4-212ENST00000533058 TRGC2P03986 189 aa8.63□□□□□ -1.03
TRAPPC4-212ENST00000533058 RPL39P62891 51 aaKnown RBP8.63□□□□□ -1.03
TRAPPC4-212ENST00000533058 REG3AQ06141 175 aa8.63□□□□□ -1.03
TRAPPC4-212ENST00000533058 LRCOL1A6NCL2 159 aa8.62□□□□□ -1.03
TRAPPC4-212ENST00000533058 K7EMI3 77 aa8.62□□□□□ -1.03
TRAPPC4-212ENST00000533058 ENHOQ6UWT2 76 aa8.62□□□□□ -1.03
TRAPPC4-212ENST00000533058 MRPL52Q86TS9 123 aaKnown RBP8.62□□□□□ -1.03
TRAPPC4-212ENST00000533058 C1orf43Q9BWL3 253 aa8.62□□□□□ -1.03
TRAPPC4-212ENST00000533058 CYSLTR1Q9Y271 337 aa8.62□□□□□ -1.03
TRAPPC4-212ENST00000533058 G0S2P27469 103 aa8.61□□□□□ -1.03
TRAPPC4-212ENST00000533058 MIAQ16674 131 aa8.61□□□□□ -1.03
TRAPPC4-212ENST00000533058 C18orf32Q8TCD1 76 aa8.61□□□□□ -1.03
TRAPPC4-212ENST00000533058 UBE2D4Q9Y2X8 147 aa8.61□□□□□ -1.03
TRAPPC4-212ENST00000533058 COX11Q9Y6N1 276 aa8.61□□□□□ -1.03
TRAPPC4-212ENST00000533058 PCLOQ9Y6V0 5065 aa8.6□□□□□ -1.03
TRAPPC4-212ENST00000533058 IGLV10-54A0A075B6I4 117 aa8.6□□□□□ -1.03
TRAPPC4-212ENST00000533058 RAB5BP61020 215 aa8.6□□□□□ -1.03
TRAPPC4-212ENST00000533058 RNASE13Q5GAN3 156 aaKnown RBP8.6□□□□□ -1.03
TRAPPC4-212ENST00000533058 C2orf66Q6UXQ4 117 aa8.6□□□□□ -1.03
TRAPPC4-212ENST00000533058 ZNF664Q8N3J9 261 aa8.6□□□□□ -1.03
TRAPPC4-212ENST00000533058 NTN5Q8WTR8 489 aaPredicted RBP8.6□□□□□ -1.03
TRAPPC4-212ENST00000533058 TIMM21Q9BVV7 248 aa8.6□□□□□ -1.03
TRAPPC4-212ENST00000533058 SPANXA1Q9NS26 97 aa8.6□□□□□ -1.03
TRAPPC4-212ENST00000533058 PRR34Q9NV39 138 aa8.6□□□□□ -1.03
TRAPPC4-212ENST00000533058 Q6ZUT4 128 aa8.59□□□□□ -1.03
TRAPPC4-212ENST00000533058 BAGE3Q86Y29 109 aa8.59□□□□□ -1.03
TRAPPC4-212ENST00000533058 CDC42SE2Q9NRR3 84 aa8.59□□□□□ -1.03
TRAPPC4-212ENST00000533058 AP5S1Q9NUS5 200 aa8.59□□□□□ -1.03
TRAPPC4-212ENST00000533058 HSPG2P98160 4391 aa8.59□□□□□ -1.04
TRAPPC4-212ENST00000533058 LINC00614P0C842 121 aa8.58□□□□□ -1.04
TRAPPC4-212ENST00000533058 CSDC2Q9Y534 153 aaKnown RBP8.58□□□□□ -1.04
TRAPPC4-212ENST00000533058 APOBP04114 4563 aaKnown RBP8.57□□□□□ -1.04
TRAPPC4-212ENST00000533058 TRAV8-4A0A0B4J246 113 aa8.57□□□□□ -1.04
TRAPPC4-212ENST00000533058 SS18Q15532 418 aa8.57□□□□□ -1.04
TRAPPC4-212ENST00000533058 Q6ZN92 141 aa8.57□□□□□ -1.04
TRAPPC4-212ENST00000533058 Q8N814 137 aa8.57□□□□□ -1.04
TRAPPC4-212ENST00000533058 OPRPNQ99935 248 aaPredicted RBP8.57□□□□□ -1.04
TRAPPC4-212ENST00000533058 TRAV13-1A0A0B4J241 112 aa8.56□□□□□ -1.04
TRAPPC4-212ENST00000533058 LINC01546A6NGU7 62 aa8.56□□□□□ -1.04
TRAPPC4-212ENST00000533058 BAALCQ8WXS3 180 aa8.56□□□□□ -1.04
TRAPPC4-212ENST00000533058 TOMM6Q96B49 74 aa8.56□□□□□ -1.04
TRAPPC4-212ENST00000533058 TMEM141Q96I45 108 aa8.56□□□□□ -1.04
TRAPPC4-212ENST00000533058 SCGB3A1Q96QR1 104 aa8.56□□□□□ -1.04
TRAPPC4-212ENST00000533058 LINC00959A0A1B0GUT2 108 aa8.55□□□□□ -1.04
TRAPPC4-212ENST00000533058 GAGE12HA6NDE8 117 aa8.55□□□□□ -1.04
TRAPPC4-212ENST00000533058 IFITM10A6NMD0 228 aa8.55□□□□□ -1.04
TRAPPC4-212ENST00000533058 LECT2O14960 151 aa8.55□□□□□ -1.04
TRAPPC4-212ENST00000533058 GCSHP23434 173 aa8.55□□□□□ -1.04
TRAPPC4-212ENST00000533058 XCL1P47992 114 aa8.55□□□□□ -1.04
TRAPPC4-212ENST00000533058 MRPS36P82909 103 aaKnown RBP8.55□□□□□ -1.04
TRAPPC4-212ENST00000533058 PMCHL1Q16048 86 aa8.55□□□□□ -1.04
TRAPPC4-212ENST00000533058 Q8N1X5 172 aa8.55□□□□□ -1.04
TRAPPC4-212ENST00000533058 MAPKAPK5-AS1Q8N8E1 139 aa8.55□□□□□ -1.04
TRAPPC4-212ENST00000533058 CHCHD10Q8WYQ3 142 aaPredicted RBP8.55□□□□□ -1.04
TRAPPC4-212ENST00000533058 KRTAP17-1Q9BYP8 105 aa8.55□□□□□ -1.04
TRAPPC4-212ENST00000533058 PYGO1Q9Y3Y4 419 aa8.55□□□□□ -1.04
TRAPPC4-212ENST00000533058 IGLV4-3A0A075B6K6 122 aa8.54□□□□□ -1.04
TRAPPC4-212ENST00000533058 LINC01549A6NIU2 74 aa8.54□□□□□ -1.04
TRAPPC4-212ENST00000533058 CCL25O15444 150 aa8.54□□□□□ -1.04
TRAPPC4-212ENST00000533058 KRTAP10-1P60331 282 aa8.54□□□□□ -1.04
TRAPPC4-212ENST00000533058 PAPPA-AS1Q5QFB9 102 aa8.54□□□□□ -1.04
TRAPPC4-212ENST00000533058 TEX43Q6ZNM6 134 aa8.54□□□□□ -1.04
TRAPPC4-212ENST00000533058 CHCHD1Q96BP2 118 aaKnown RBP8.54□□□□□ -1.04
TRAPPC4-212ENST00000533058 URB1-AS1Q96HZ7 61 aa8.54□□□□□ -1.04
TRAPPC4-212ENST00000533058 C2orf88Q9BSF0 95 aa8.54□□□□□ -1.04
TRAPPC4-212ENST00000533058 VCX2Q9H322 139 aa8.54□□□□□ -1.04
TRAPPC4-212ENST00000533058 ABCA13Q86UQ4 5058 aa8.54□□□□□ -1.04
TRAPPC4-212ENST00000533058 IGLV5-52A0A0A0MRZ9 124 aa8.53□□□□□ -1.04
TRAPPC4-212ENST00000533058 C1orf196B1AJZ1 125 aa8.53□□□□□ -1.04
TRAPPC4-212ENST00000533058 HSBP1O75506 76 aa8.53□□□□□ -1.04
TRAPPC4-212ENST00000533058 HBDP02042 147 aa8.53□□□□□ -1.04
TRAPPC4-212ENST00000533058 FUSP35637 526 aaKnown RBP eCLIP8.53□□□□□ -1.04
TRAPPC4-212ENST00000533058 ERASQ7Z444 233 aa8.53□□□□□ -1.04
TRAPPC4-212ENST00000533058 IGIPA6NJ69 53 aa8.52□□□□□ -1.05
TRAPPC4-212ENST00000533058 XGP55808 180 aa8.52□□□□□ -1.05
TRAPPC4-212ENST00000533058 WFDC2Q14508 124 aa8.52□□□□□ -1.05
TRAPPC4-212ENST00000533058 TIMM17AQ99595 171 aa8.52□□□□□ -1.05
TRAPPC4-212ENST00000533058 KRTAP4-5Q9BYR2 181 aa8.52□□□□□ -1.05
TRAPPC4-212ENST00000533058 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.51□□□□□ -1.05
TRAPPC4-212ENST00000533058 SERF1AO75920 110 aa8.51□□□□□ -1.05
TRAPPC4-212ENST00000533058 NPSP0C0P6 89 aa8.51□□□□□ -1.05
TRAPPC4-212ENST00000533058 FAM104AQ969W3 186 aa8.51□□□□□ -1.05
TRAPPC4-212ENST00000533058 USP17L23D6RBM5 183 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms