RNA–Protein interactions for RNA: ENST00000532820.5

CAPRIN1-212, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 3,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-212ENST00000532820 DNAJC30Q96LL9 226 aa9.54□□□□□ -0.88
CAPRIN1-212ENST00000532820 SRSF9Q13242 221 aaKnown RBP eCLIP9.53□□□□□ -0.88
CAPRIN1-212ENST00000532820 NTM-AS1Q6ZSK4 140 aa9.53□□□□□ -0.88
CAPRIN1-212ENST00000532820 H3BRM9 83 aa9.53□□□□□ -0.88
CAPRIN1-212ENST00000532820 J3QQQ9 107 aa9.53□□□□□ -0.88
CAPRIN1-212ENST00000532820 SMIM13P0DJ93 91 aa9.53□□□□□ -0.88
CAPRIN1-212ENST00000532820 DEFB135Q30KP9 77 aa9.53□□□□□ -0.88
CAPRIN1-212ENST00000532820 C9orf66Q5T8R8 295 aa9.53□□□□□ -0.88
CAPRIN1-212ENST00000532820 NFE4Q86UQ8 179 aa9.52□□□□□ -0.89
CAPRIN1-212ENST00000532820 CITED1Q99966 193 aa9.52□□□□□ -0.89
CAPRIN1-212ENST00000532820 PYGO1Q9Y3Y4 419 aa9.52□□□□□ -0.89
CAPRIN1-212ENST00000532820 LGALS3P17931 250 aaKnown RBP9.52□□□□□ -0.89
CAPRIN1-212ENST00000532820 AMELXQ99217 191 aa9.52□□□□□ -0.89
CAPRIN1-212ENST00000532820 TMEM223A0PJW6 202 aa9.52□□□□□ -0.89
CAPRIN1-212ENST00000532820 C9orf118A6NHY6 69 aa9.52□□□□□ -0.89
CAPRIN1-212ENST00000532820 SHISA2Q6UWI4 295 aa9.51□□□□□ -0.89
CAPRIN1-212ENST00000532820 TM2D2Q9BX73 214 aa9.51□□□□□ -0.89
CAPRIN1-212ENST00000532820 SPINK8P0C7L1 97 aa9.5□□□□□ -0.89
CAPRIN1-212ENST00000532820 UBE2D3P61077 147 aa9.5□□□□□ -0.89
CAPRIN1-212ENST00000532820 UBE2D2P62837 147 aa9.5□□□□□ -0.89
CAPRIN1-212ENST00000532820 SPANXA1Q9NS26 97 aa9.5□□□□□ -0.89
CAPRIN1-212ENST00000532820 TRAV13-1A0A0B4J241 112 aa9.49□□□□□ -0.89
CAPRIN1-212ENST00000532820 OVOL2Q9BRP0 275 aa9.49□□□□□ -0.89
CAPRIN1-212ENST00000532820 IGKV3OR2-268A0A0C4DH90 116 aa9.49□□□□□ -0.89
CAPRIN1-212ENST00000532820 A0A0J9YY99 117 aa9.49□□□□□ -0.89
CAPRIN1-212ENST00000532820 SFTA2Q6UW10 78 aa9.49□□□□□ -0.89
CAPRIN1-212ENST00000532820 TRAV26-1A0A087WT03 109 aa9.49□□□□□ -0.89
CAPRIN1-212ENST00000532820 A0A096LPF7 62 aa9.49□□□□□ -0.89
CAPRIN1-212ENST00000532820 INSL3P51460 131 aa9.49□□□□□ -0.89
CAPRIN1-212ENST00000532820 X6R8D5 127 aa9.49□□□□□ -0.89
CAPRIN1-212ENST00000532820 TRBV10-1A0A0K0K1A3 114 aa9.48□□□□□ -0.89
CAPRIN1-212ENST00000532820 GAGE10A6NGK3 116 aa9.48□□□□□ -0.89
CAPRIN1-212ENST00000532820 MRPS36P82909 103 aaKnown RBP9.48□□□□□ -0.89
CAPRIN1-212ENST00000532820 FHL2Q14192 279 aa9.48□□□□□ -0.89
CAPRIN1-212ENST00000532820 C12orf74Q32Q52 190 aa9.48□□□□□ -0.89
CAPRIN1-212ENST00000532820 GEMIN7Q9H840 131 aaKnown RBP9.48□□□□□ -0.89
CAPRIN1-212ENST00000532820 BAHCC1Q9P281 2608 aa9.48□□□□□ -0.89
CAPRIN1-212ENST00000532820 IGHV3-30-3P0DP02 117 aa9.48□□□□□ -0.89
CAPRIN1-212ENST00000532820 COX6A2Q02221 97 aa9.48□□□□□ -0.89
CAPRIN1-212ENST00000532820 SAMD5Q5TGI4 173 aa9.48□□□□□ -0.89
CAPRIN1-212ENST00000532820 TIMM21Q9BVV7 248 aa9.48□□□□□ -0.89
CAPRIN1-212ENST00000532820 DAZ4Q86SG3 579 aaKnown RBP9.47□□□□□ -0.89
CAPRIN1-212ENST00000532820 DAZ3Q9NR90 486 aaKnown RBP9.47□□□□□ -0.89
CAPRIN1-212ENST00000532820 CDKN2A-AS1Q9UH64 79 aa9.47□□□□□ -0.89
CAPRIN1-212ENST00000532820 COL6A5A8TX70 2615 aa9.47□□□□□ -0.89
CAPRIN1-212ENST00000532820 LEPROTO15243 131 aa9.47□□□□□ -0.89
CAPRIN1-212ENST00000532820 APOMO95445 188 aa9.47□□□□□ -0.89
CAPRIN1-212ENST00000532820 CRYBA4P53673 196 aa9.47□□□□□ -0.89
CAPRIN1-212ENST00000532820 OXLD1Q5BKU9 147 aa9.47□□□□□ -0.89
CAPRIN1-212ENST00000532820 SMAGPQ0VAQ4 97 aa9.46□□□□□ -0.89
CAPRIN1-212ENST00000532820 GTSF1LQ9H1H1 148 aa9.46□□□□□ -0.89
CAPRIN1-212ENST00000532820 A0A1W2PPM0 123 aa9.46□□□□□ -0.9
CAPRIN1-212ENST00000532820 UBE2L6O14933 153 aa9.46□□□□□ -0.9
CAPRIN1-212ENST00000532820 GAGE6Q13070 117 aa9.46□□□□□ -0.9
CAPRIN1-212ENST00000532820 FAM222AQ5U5X8 452 aa9.46□□□□□ -0.9
CAPRIN1-212ENST00000532820 TAL2Q16559 108 aa9.46□□□□□ -0.9
CAPRIN1-212ENST00000532820 NOTCH1P46531 2555 aa9.45□□□□□ -0.9
CAPRIN1-212ENST00000532820 UBE2D1P51668 147 aa9.45□□□□□ -0.9
CAPRIN1-212ENST00000532820 C10orf126Q8N4M7 172 aa9.45□□□□□ -0.9
CAPRIN1-212ENST00000532820 TRBV6-4A0A1B0GX49 114 aa9.45□□□□□ -0.9
CAPRIN1-212ENST00000532820 SPCS1Q9Y6A9 102 aa9.45□□□□□ -0.9
CAPRIN1-212ENST00000532820 TINCRA0A1B0GVN0 87 aa9.44□□□□□ -0.9
CAPRIN1-212ENST00000532820 NPC2P61916 151 aa9.44□□□□□ -0.9
CAPRIN1-212ENST00000532820 FABP2P12104 132 aa9.44□□□□□ -0.9
CAPRIN1-212ENST00000532820 OR5A1Q8NGJ0 315 aa9.44□□□□□ -0.9
CAPRIN1-212ENST00000532820 TMEM243Q9BU79 118 aa9.44□□□□□ -0.9
CAPRIN1-212ENST00000532820 ANK2Q01484 3957 aa9.44□□□□□ -0.9
CAPRIN1-212ENST00000532820 CYSRT1A8MQ03 144 aa9.43□□□□□ -0.9
CAPRIN1-212ENST00000532820 IGLL5B9A064 214 aa9.43□□□□□ -0.9
CAPRIN1-212ENST00000532820 GYPEP15421 78 aa9.43□□□□□ -0.9
CAPRIN1-212ENST00000532820 KRTAP24-1Q3LI83 254 aa9.43□□□□□ -0.9
CAPRIN1-212ENST00000532820 CHCHD5Q9BSY4 110 aa9.43□□□□□ -0.9
CAPRIN1-212ENST00000532820 LINC00242Q5T6M2 205 aa9.43□□□□□ -0.9
CAPRIN1-212ENST00000532820 IGHV1-58A0A0C4DH39 117 aa9.42□□□□□ -0.9
CAPRIN1-212ENST00000532820 ZNF625Q96I27 306 aaPredicted RBP9.42□□□□□ -0.9
CAPRIN1-212ENST00000532820 K7ERU9 68 aa9.42□□□□□ -0.9
CAPRIN1-212ENST00000532820 IGHV3-30P01768 117 aa9.42□□□□□ -0.9
CAPRIN1-212ENST00000532820 IGHV3-30-5P0DP03 117 aa9.42□□□□□ -0.9
CAPRIN1-212ENST00000532820 IGHV4-30-4P0DP06 118 aa9.42□□□□□ -0.9
CAPRIN1-212ENST00000532820 SBSPONQ8IVN8 264 aa9.42□□□□□ -0.9
CAPRIN1-212ENST00000532820 VSIG2Q96IQ7 327 aa9.42□□□□□ -0.9
CAPRIN1-212ENST00000532820 CDC42SE2Q9NRR3 84 aa9.42□□□□□ -0.9
CAPRIN1-212ENST00000532820 IGHV4-28A0A0C4DH34 117 aa9.41□□□□□ -0.9
CAPRIN1-212ENST00000532820 A0A0U1RRA0 63 aa9.41□□□□□ -0.9
CAPRIN1-212ENST00000532820 PRSS2P07478 247 aa9.41□□□□□ -0.9
CAPRIN1-212ENST00000532820 PGPEP1Q9NXJ5 209 aa9.41□□□□□ -0.9
CAPRIN1-212ENST00000532820 NDUFA12Q9UI09 145 aa9.41□□□□□ -0.9
CAPRIN1-212ENST00000532820 A0A0J9YXY3 114 aa9.41□□□□□ -0.9
CAPRIN1-212ENST00000532820 K7EP34 96 aa9.41□□□□□ -0.9
CAPRIN1-212ENST00000532820 HTN3P15516 51 aa9.41□□□□□ -0.9
CAPRIN1-212ENST00000532820 MTURNQ8N3F0 131 aa9.41□□□□□ -0.9
CAPRIN1-212ENST00000532820 IGLV4-60A0A075B6I1 120 aa9.41□□□□□ -0.9
CAPRIN1-212ENST00000532820 GTF2H5Q6ZYL4 71 aa9.41□□□□□ -0.9
CAPRIN1-212ENST00000532820 DAND5Q8N907 189 aa9.41□□□□□ -0.9
CAPRIN1-212ENST00000532820 CELA1Q9UNI1 258 aa9.4□□□□□ -0.9
CAPRIN1-212ENST00000532820 KIR2DL5BQ8NHK3 375 aa9.4□□□□□ -0.9
CAPRIN1-212ENST00000532820 TMEM101Q96IK0 257 aa9.4□□□□□ -0.9
CAPRIN1-212ENST00000532820 APOC4P55056 127 aa9.4□□□□□ -0.91
CAPRIN1-212ENST00000532820 MUSTN1Q8IVN3 82 aa9.4□□□□□ -0.91
CAPRIN1-212ENST00000532820 WFDC9Q8NEX5 89 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms