RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 HIST1H2BKO60814 126 aa8.49□□□□□ -1.05
COPB1-208ENST00000532088 HIST1H2BJP06899 126 aa8.49□□□□□ -1.05
COPB1-208ENST00000532088 NPSP0C0P6 89 aa8.49□□□□□ -1.05
COPB1-208ENST00000532088 HIST1H2BOP23527 126 aa8.49□□□□□ -1.05
COPB1-208ENST00000532088 HIST1H2BBP33778 126 aa8.49□□□□□ -1.05
COPB1-208ENST00000532088 HIST1H2BDP58876 126 aa8.49□□□□□ -1.05
COPB1-208ENST00000532088 HIST1H2BCP62807 126 aa8.49□□□□□ -1.05
COPB1-208ENST00000532088 HIST2H2BEQ16778 126 aa8.49□□□□□ -1.05
COPB1-208ENST00000532088 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.49□□□□□ -1.05
COPB1-208ENST00000532088 HIST1H2BHQ93079 126 aa8.49□□□□□ -1.05
COPB1-208ENST00000532088 URB1-AS1Q96HZ7 61 aa8.49□□□□□ -1.05
COPB1-208ENST00000532088 HIST1H2BNQ99877 126 aa8.49□□□□□ -1.05
COPB1-208ENST00000532088 HIST1H2BMQ99879 126 aa8.49□□□□□ -1.05
COPB1-208ENST00000532088 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.48□□□□□ -1.05
COPB1-208ENST00000532088 IGKV2-29A2NJV5 120 aaPredicted RBP8.48□□□□□ -1.05
COPB1-208ENST00000532088 TMEM262E9PQX1 116 aa8.48□□□□□ -1.05
COPB1-208ENST00000532088 FGF6P10767 208 aa8.48□□□□□ -1.05
COPB1-208ENST00000532088 GAGE6Q13070 117 aa8.48□□□□□ -1.05
COPB1-208ENST00000532088 BAGE3Q86Y29 109 aa8.48□□□□□ -1.05
COPB1-208ENST00000532088 SPANXA1Q9NS26 97 aa8.48□□□□□ -1.05
COPB1-208ENST00000532088 CYSLTR1Q9Y271 337 aa8.48□□□□□ -1.05
COPB1-208ENST00000532088 UBE2D4Q9Y2X8 147 aa8.48□□□□□ -1.05
COPB1-208ENST00000532088 PYGO1Q9Y3Y4 419 aa8.48□□□□□ -1.05
COPB1-208ENST00000532088 TENM2Q9NT68 2774 aa8.47□□□□□ -1.05
COPB1-208ENST00000532088 NBDYA0A0U1RRE5 68 aa8.47□□□□□ -1.05
COPB1-208ENST00000532088 RBX1P62877 108 aa8.47□□□□□ -1.05
COPB1-208ENST00000532088 MPV17L2Q567V2 206 aa8.47□□□□□ -1.05
COPB1-208ENST00000532088 AMMECR1LQ6DCA0 310 aa8.47□□□□□ -1.05
COPB1-208ENST00000532088 C2orf66Q6UXQ4 117 aa8.47□□□□□ -1.05
COPB1-208ENST00000532088 DEFB104AQ8WTQ1 72 aa8.47□□□□□ -1.05
COPB1-208ENST00000532088 TOMM6Q96B49 74 aa8.47□□□□□ -1.05
COPB1-208ENST00000532088 TMEM101Q96IK0 257 aa8.47□□□□□ -1.05
COPB1-208ENST00000532088 IBA57-AS1B1ANH7 110 aa8.46□□□□□ -1.06
COPB1-208ENST00000532088 MRPS36P82909 103 aaKnown RBP8.46□□□□□ -1.06
COPB1-208ENST00000532088 ODF1Q14990 250 aa8.46□□□□□ -1.06
COPB1-208ENST00000532088 COA6Q5JTJ3 125 aaKnown RBP8.46□□□□□ -1.06
COPB1-208ENST00000532088 RNASEKQ6P5S7 137 aaKnown RBP8.46□□□□□ -1.06
COPB1-208ENST00000532088 KRTAP9-7A8MTY7 169 aa8.45□□□□□ -1.06
COPB1-208ENST00000532088 IGHV3-30P01768 117 aa8.45□□□□□ -1.06
COPB1-208ENST00000532088 IGHV3-33P01772 117 aa8.45□□□□□ -1.06
COPB1-208ENST00000532088 HBDP02042 147 aa8.45□□□□□ -1.06
COPB1-208ENST00000532088 IGHV3-30-3P0DP02 117 aa8.45□□□□□ -1.06
COPB1-208ENST00000532088 IGHV3-30-5P0DP03 117 aa8.45□□□□□ -1.06
COPB1-208ENST00000532088 Q6ZR54 194 aa8.45□□□□□ -1.06
COPB1-208ENST00000532088 OR5A1Q8NGJ0 315 aa8.45□□□□□ -1.06
COPB1-208ENST00000532088 TIMM17AQ99595 171 aa8.45□□□□□ -1.06
COPB1-208ENST00000532088 PRR34Q9NV39 138 aa8.45□□□□□ -1.06
COPB1-208ENST00000532088 HSBP1O75506 76 aa8.44□□□□□ -1.06
COPB1-208ENST00000532088 SERF1AO75920 110 aa8.44□□□□□ -1.06
COPB1-208ENST00000532088 RPL39P62891 51 aaKnown RBP8.44□□□□□ -1.06
COPB1-208ENST00000532088 DGAT2L7PQ6IED9 249 aa8.44□□□□□ -1.06
COPB1-208ENST00000532088 Q8N976 141 aa8.44□□□□□ -1.06
COPB1-208ENST00000532088 CDC42SE2Q9NRR3 84 aa8.44□□□□□ -1.06
COPB1-208ENST00000532088 IGLV4-60A0A075B6I1 120 aa8.43□□□□□ -1.06
COPB1-208ENST00000532088 A0A096LNJ9 63 aa8.43□□□□□ -1.06
COPB1-208ENST00000532088 TRAV8-3A0A0A6YYJ7 113 aa8.43□□□□□ -1.06
COPB1-208ENST00000532088 IGIPA6NJ69 53 aa8.43□□□□□ -1.06
COPB1-208ENST00000532088 ANGP03950 147 aaKnown RBP8.43□□□□□ -1.06
COPB1-208ENST00000532088 PAPPA-AS1Q5QFB9 102 aa8.43□□□□□ -1.06
COPB1-208ENST00000532088 ERASQ7Z444 233 aa8.43□□□□□ -1.06
COPB1-208ENST00000532088 ZNF664Q8N3J9 261 aa8.43□□□□□ -1.06
COPB1-208ENST00000532088 TMEM141Q96I45 108 aa8.43□□□□□ -1.06
COPB1-208ENST00000532088 KRTAP4-7Q9BYR0 210 aa8.43□□□□□ -1.06
COPB1-208ENST00000532088 KLK12Q9UKR0 248 aa8.43□□□□□ -1.06
COPB1-208ENST00000532088 KMT2AQ03164 3969 aa8.43□□□□□ -1.06
COPB1-208ENST00000532088 CCL25O15444 150 aa8.42□□□□□ -1.06
COPB1-208ENST00000532088 PDZD11Q5EBL8 140 aa8.42□□□□□ -1.06
COPB1-208ENST00000532088 NFE4Q86UQ8 179 aa8.42□□□□□ -1.06
COPB1-208ENST00000532088 KRTAP3-1Q9BYR8 98 aa8.42□□□□□ -1.06
COPB1-208ENST00000532088 KRTAP1-5Q9BYS1 174 aa8.42□□□□□ -1.06
COPB1-208ENST00000532088 IGLV4-3A0A075B6K6 122 aa8.41□□□□□ -1.06
COPB1-208ENST00000532088 TRAV8-4A0A0B4J246 113 aa8.41□□□□□ -1.06
COPB1-208ENST00000532088 ATP5LO75964 103 aa8.41□□□□□ -1.06
COPB1-208ENST00000532088 CRPP02741 224 aa8.41□□□□□ -1.06
COPB1-208ENST00000532088 MIAQ16674 131 aa8.41□□□□□ -1.06
COPB1-208ENST00000532088 Q6ZN92 141 aa8.41□□□□□ -1.06
COPB1-208ENST00000532088 LINC00269Q8N2A0 174 aa8.41□□□□□ -1.06
COPB1-208ENST00000532088 PACRGQ96M98 296 aaPredicted RBP8.41□□□□□ -1.06
COPB1-208ENST00000532088 SCGB3A1Q96QR1 104 aa8.41□□□□□ -1.06
COPB1-208ENST00000532088 KMT2CQ8NEZ4 4911 aaKnown RBP8.4□□□□□ -1.06
COPB1-208ENST00000532088 REG3AQ06141 175 aa8.4□□□□□ -1.06
COPB1-208ENST00000532088 ENHOQ6UWT2 76 aa8.4□□□□□ -1.06
COPB1-208ENST00000532088 Q6ZUT4 128 aa8.4□□□□□ -1.06
COPB1-208ENST00000532088 FAM104AQ969W3 186 aa8.4□□□□□ -1.06
COPB1-208ENST00000532088 RMI2Q96E14 147 aa8.4□□□□□ -1.06
COPB1-208ENST00000532088 AMELXQ99217 191 aa8.4□□□□□ -1.06
COPB1-208ENST00000532088 COX11Q9Y6N1 276 aa8.4□□□□□ -1.06
COPB1-208ENST00000532088 NUPR1O60356 82 aa8.39□□□□□ -1.07
COPB1-208ENST00000532088 NDUFA6P56556 154 aa8.39□□□□□ -1.07
COPB1-208ENST00000532088 UBE2WQ96B02 151 aa8.39□□□□□ -1.07
COPB1-208ENST00000532088 HYDINQ4G0P3 5121 aa8.39□□□□□ -1.07
COPB1-208ENST00000532088 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.38□□□□□ -1.07
COPB1-208ENST00000532088 PMCHL1Q16048 86 aa8.38□□□□□ -1.07
COPB1-208ENST00000532088 TEX43Q6ZNM6 134 aa8.38□□□□□ -1.07
COPB1-208ENST00000532088 C6orf223Q8N319 242 aa8.38□□□□□ -1.07
COPB1-208ENST00000532088 C2orf88Q9BSF0 95 aa8.38□□□□□ -1.07
COPB1-208ENST00000532088 TM2D2Q9BX73 214 aa8.38□□□□□ -1.07
COPB1-208ENST00000532088 VCX2Q9H322 139 aa8.38□□□□□ -1.07
COPB1-208ENST00000532088 RYR2Q92736 4967 aa8.38□□□□□ -1.07
COPB1-208ENST00000532088 M0R2N4 97 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms