RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 TPT1P13693 172 aaKnown RBP4.11□□□□□ -1.75
CSDE1-213ENST00000530784 UBE2G2P60604 165 aa4.11□□□□□ -1.75
CSDE1-213ENST00000530784 Q0VG73 95 aa4.11□□□□□ -1.75
CSDE1-213ENST00000530784 DNLZQ5SXM8 178 aa4.11□□□□□ -1.75
CSDE1-213ENST00000530784 ZFP82Q8N141 532 aa4.11□□□□□ -1.75
CSDE1-213ENST00000530784 SFRP2Q96HF1 295 aa4.11□□□□□ -1.75
CSDE1-213ENST00000530784 HIST1H4GQ99525 98 aa4.11□□□□□ -1.75
CSDE1-213ENST00000530784 MED28Q9H204 178 aa4.11□□□□□ -1.75
CSDE1-213ENST00000530784 TNFSF18Q9UNG2 199 aa4.11□□□□□ -1.75
CSDE1-213ENST00000530784 PHLDA3Q9Y5J5 127 aa4.11□□□□□ -1.75
CSDE1-213ENST00000530784 HMCN2Q8NDA2 5059 aa4.11□□□□□ -1.75
CSDE1-213ENST00000530784 UBR4Q5T4S7 5183 aa4.11□□□□□ -1.75
CSDE1-213ENST00000530784 TMSB15BA0A087X1C1 80 aa4.1□□□□□ -1.75
CSDE1-213ENST00000530784 CTXND1A0A1B0GTU2 59 aa4.1□□□□□ -1.75
CSDE1-213ENST00000530784 HLA-DQA1P01909 254 aa4.1□□□□□ -1.75
CSDE1-213ENST00000530784 GIPP09681 153 aaPredicted RBP4.1□□□□□ -1.75
CSDE1-213ENST00000530784 CRIP1P50238 77 aa4.1□□□□□ -1.75
CSDE1-213ENST00000530784 UBE2D3P61077 147 aa4.1□□□□□ -1.75
CSDE1-213ENST00000530784 RPL37AP61513 92 aaKnown RBP4.1□□□□□ -1.75
CSDE1-213ENST00000530784 UBE2G1P62253 170 aa4.1□□□□□ -1.75
CSDE1-213ENST00000530784 UBE2D2P62837 147 aa4.1□□□□□ -1.75
CSDE1-213ENST00000530784 FAM162BQ5T6X4 162 aa4.1□□□□□ -1.75
CSDE1-213ENST00000530784 PP632Q6XCG6 107 aa4.1□□□□□ -1.75
CSDE1-213ENST00000530784 HIST1H2BAQ96A08 127 aa4.1□□□□□ -1.75
CSDE1-213ENST00000530784 ZC2HC1AQ96GY0 325 aa4.1□□□□□ -1.75
CSDE1-213ENST00000530784 NKX6-2Q9C056 277 aaPredicted RBP4.1□□□□□ -1.75
CSDE1-213ENST00000530784 ZFP30Q9Y2G7 519 aa4.1□□□□□ -1.75
CSDE1-213ENST00000530784 TRBV7-3A0A075B6L6 115 aa4.09□□□□□ -1.75
CSDE1-213ENST00000530784 TRBV6-8A0A0A6YYG3 113 aa4.09□□□□□ -1.75
CSDE1-213ENST00000530784 BORCS7-ASMTA0A0B4J1R7 106 aa4.09□□□□□ -1.75
CSDE1-213ENST00000530784 TMEM262E9PQX1 116 aa4.09□□□□□ -1.75
CSDE1-213ENST00000530784 G3V3Q6 166 aa4.09□□□□□ -1.75
CSDE1-213ENST00000530784 ANGP03950 147 aaKnown RBP4.09□□□□□ -1.75
CSDE1-213ENST00000530784 CTRLP40313 264 aa4.09□□□□□ -1.75
CSDE1-213ENST00000530784 PKIAP61925 76 aa4.09□□□□□ -1.75
CSDE1-213ENST00000530784 ZNF56Q15929 161 aa4.09□□□□□ -1.75
CSDE1-213ENST00000530784 ZNF726P1Q15940 193 aa4.09□□□□□ -1.75
CSDE1-213ENST00000530784 RPL7L1Q6DKI1 246 aaKnown RBP4.09□□□□□ -1.75
CSDE1-213ENST00000530784 ENHOQ6UWT2 76 aa4.09□□□□□ -1.75
CSDE1-213ENST00000530784 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.09□□□□□ -1.75
CSDE1-213ENST00000530784 FMC1Q96HJ9 113 aa4.09□□□□□ -1.75
CSDE1-213ENST00000530784 RAB4BP61018 213 aa4.08□□□□□ -1.76
CSDE1-213ENST00000530784 MIAQ16674 131 aa4.08□□□□□ -1.76
CSDE1-213ENST00000530784 MPV17L2Q567V2 206 aa4.08□□□□□ -1.76
CSDE1-213ENST00000530784 AKR1C8PQ5T2L2 129 aa4.08□□□□□ -1.76
CSDE1-213ENST00000530784 KRTAP5-2Q701N4 177 aa4.08□□□□□ -1.76
CSDE1-213ENST00000530784 NKAPP1Q8N9T2 125 aa4.08□□□□□ -1.76
CSDE1-213ENST00000530784 INO80EQ8NBZ0 244 aaPredicted RBP4.08□□□□□ -1.76
CSDE1-213ENST00000530784 TCEAL7Q9BRU2 100 aa4.08□□□□□ -1.76
CSDE1-213ENST00000530784 FXYD6-FXYD2A0A087WZ82 144 aa4.07□□□□□ -1.76
CSDE1-213ENST00000530784 TRBV6-1A0A0K0K1D8 114 aa4.07□□□□□ -1.76
CSDE1-213ENST00000530784 MAP1LC3B2A6NCE7 125 aa4.07□□□□□ -1.76
CSDE1-213ENST00000530784 HMSDA8MTL9 139 aa4.07□□□□□ -1.76
CSDE1-213ENST00000530784 LTAP01374 205 aa4.07□□□□□ -1.76
CSDE1-213ENST00000530784 AKR1C3P42330 323 aa4.07□□□□□ -1.76
CSDE1-213ENST00000530784 TMEM97Q5BJF2 176 aa4.07□□□□□ -1.76
CSDE1-213ENST00000530784 STOML3Q8TAV4 291 aa4.07□□□□□ -1.76
CSDE1-213ENST00000530784 CHCHD10Q8WYQ3 142 aaPredicted RBP4.07□□□□□ -1.76
CSDE1-213ENST00000530784 MAP1LC3BQ9GZQ8 125 aa4.07□□□□□ -1.76
CSDE1-213ENST00000530784 DNAH8Q96JB1 4490 aa4.06□□□□□ -1.76
CSDE1-213ENST00000530784 RBX1P62877 108 aa4.06□□□□□ -1.76
CSDE1-213ENST00000530784 RPL19P84098 196 aaKnown RBP4.06□□□□□ -1.76
CSDE1-213ENST00000530784 Q5BKY6 102 aa4.06□□□□□ -1.76
CSDE1-213ENST00000530784 CLPSL2Q6UWE3 100 aa4.06□□□□□ -1.76
CSDE1-213ENST00000530784 C9orf62Q8N4C0 152 aa4.06□□□□□ -1.76
CSDE1-213ENST00000530784 C9orf163Q8N9P6 203 aa4.06□□□□□ -1.76
CSDE1-213ENST00000530784 OR10AG1Q8NH19 301 aa4.06□□□□□ -1.76
CSDE1-213ENST00000530784 ZNF471Q9BX82 626 aaPredicted RBP4.06□□□□□ -1.76
CSDE1-213ENST00000530784 TRBV25-1A0A075B6N4 114 aa4.05□□□□□ -1.76
CSDE1-213ENST00000530784 A0A0D9SG52 128 aa4.05□□□□□ -1.76
CSDE1-213ENST00000530784 SNAI2O43623 268 aa4.05□□□□□ -1.76
CSDE1-213ENST00000530784 CXCL1P09341 107 aa4.05□□□□□ -1.76
CSDE1-213ENST00000530784 SMIM17P0DL12 118 aa4.05□□□□□ -1.76
CSDE1-213ENST00000530784 ZNF345Q14585 488 aa4.05□□□□□ -1.76
CSDE1-213ENST00000530784 SPANXN1Q5VSR9 72 aa4.05□□□□□ -1.76
CSDE1-213ENST00000530784 LINC00269Q8N2A0 174 aa4.05□□□□□ -1.76
CSDE1-213ENST00000530784 AP1S3Q96PC3 154 aa4.05□□□□□ -1.76
CSDE1-213ENST00000530784 DERL1Q9BUN8 251 aa4.05□□□□□ -1.76
CSDE1-213ENST00000530784 VAX2Q9UIW0 290 aa4.05□□□□□ -1.76
CSDE1-213ENST00000530784 IGLV10-54A0A075B6I4 117 aa4.04□□□□□ -1.76
CSDE1-213ENST00000530784 MUC21A0A0G2JKD1 596 aa4.04□□□□□ -1.76
CSDE1-213ENST00000530784 MUC21A0A140T8X8 626 aa4.04□□□□□ -1.76
CSDE1-213ENST00000530784 SMLR1H3BR10 107 aa4.04□□□□□ -1.76
CSDE1-213ENST00000530784 S100A9P06702 114 aaKnown RBP4.04□□□□□ -1.76
CSDE1-213ENST00000530784 OR5AL1P0C617 328 aa4.04□□□□□ -1.76
CSDE1-213ENST00000530784 REG3AQ06141 175 aa4.04□□□□□ -1.76
CSDE1-213ENST00000530784 IQCJQ1A5X6 159 aa4.04□□□□□ -1.76
CSDE1-213ENST00000530784 SDIM1Q6ZPB5 146 aa4.04□□□□□ -1.76
CSDE1-213ENST00000530784 Q6ZRU5 148 aa4.04□□□□□ -1.76
CSDE1-213ENST00000530784 NTM-AS1Q6ZSK4 140 aa4.04□□□□□ -1.76
CSDE1-213ENST00000530784 LRP1Q07954 4544 aaKnown RBP4.03□□□□□ -1.76
CSDE1-213ENST00000530784 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.03□□□□□ -1.76
CSDE1-213ENST00000530784 IGHV1-24A0A0C4DH33 117 aa4.03□□□□□ -1.76
CSDE1-213ENST00000530784 H7C1H1 209 aa4.03□□□□□ -1.76
CSDE1-213ENST00000530784 ARPC5O15511 151 aa4.03□□□□□ -1.76
CSDE1-213ENST00000530784 MGPP08493 103 aa4.03□□□□□ -1.76
CSDE1-213ENST00000530784 MT1HL1P0DM35 61 aa4.03□□□□□ -1.76
CSDE1-213ENST00000530784 RPS10P46783 165 aaKnown RBP4.03□□□□□ -1.76
CSDE1-213ENST00000530784 NKX2-5P52952 324 aaPredicted RBP4.03□□□□□ -1.76
CSDE1-213ENST00000530784 CNBPP62633 177 aaKnown RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms