RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 A0A1W2PRE2 83 aa2.79□□□□□ -1.96
CSDE1-212ENST00000529046 FABP5P3A8MUU1 101 aa2.79□□□□□ -1.96
CSDE1-212ENST00000529046 M0R036 132 aa2.79□□□□□ -1.96
CSDE1-212ENST00000529046 CXorf1O96002 111 aa2.79□□□□□ -1.96
CSDE1-212ENST00000529046 ZNF80P51504 273 aaPredicted RBP2.79□□□□□ -1.96
CSDE1-212ENST00000529046 FLI1Q01543 452 aaPredicted RBP2.79□□□□□ -1.96
CSDE1-212ENST00000529046 IFITM3Q01628 133 aa2.79□□□□□ -1.96
CSDE1-212ENST00000529046 DPPA3Q6W0C5 159 aa2.79□□□□□ -1.96
CSDE1-212ENST00000529046 TEX43Q6ZNM6 134 aa2.79□□□□□ -1.96
CSDE1-212ENST00000529046 CAMK2N1Q7Z7J9 78 aa2.79□□□□□ -1.96
CSDE1-212ENST00000529046 CYB561D1Q8N8Q1 229 aa2.79□□□□□ -1.96
CSDE1-212ENST00000529046 Q8N976 141 aa2.79□□□□□ -1.96
CSDE1-212ENST00000529046 HYLS1Q96M11 299 aa2.79□□□□□ -1.96
CSDE1-212ENST00000529046 AQP10Q96PS8 301 aa2.79□□□□□ -1.96
CSDE1-212ENST00000529046 TCEAL7Q9BRU2 100 aa2.79□□□□□ -1.96
CSDE1-212ENST00000529046 WFDC1Q9HC57 220 aa2.79□□□□□ -1.96
CSDE1-212ENST00000529046 TMEM167BQ9NRX6 74 aa2.79□□□□□ -1.96
CSDE1-212ENST00000529046 SPANXB1Q9NS25 103 aaPredicted RBP2.79□□□□□ -1.96
CSDE1-212ENST00000529046 EPDR1Q9UM22 224 aa2.79□□□□□ -1.96
CSDE1-212ENST00000529046 TNFSF18Q9UNG2 199 aa2.79□□□□□ -1.96
CSDE1-212ENST00000529046 PSG8Q9UQ74 426 aa2.79□□□□□ -1.96
CSDE1-212ENST00000529046 FAT1Q14517 4588 aa2.79□□□□□ -1.96
CSDE1-212ENST00000529046 A0A096LNJ9 63 aa2.78□□□□□ -1.96
CSDE1-212ENST00000529046 TRAV8-1A0A0A6YYK1 113 aa2.78□□□□□ -1.96
CSDE1-212ENST00000529046 TRAV8-4A0A0B4J246 113 aa2.78□□□□□ -1.96
CSDE1-212ENST00000529046 TRBV6-1A0A0K0K1D8 114 aa2.78□□□□□ -1.96
CSDE1-212ENST00000529046 GGTLC3B5MD39 225 aa2.78□□□□□ -1.96
CSDE1-212ENST00000529046 F6UZH7 168 aa2.78□□□□□ -1.96
CSDE1-212ENST00000529046 PEX7O00628 323 aa2.78□□□□□ -1.96
CSDE1-212ENST00000529046 P01737 135 aa2.78□□□□□ -1.96
CSDE1-212ENST00000529046 SMR3BP02814 79 aaPredicted RBP2.78□□□□□ -1.96
CSDE1-212ENST00000529046 ARL14EPLP0DKL9 152 aa2.78□□□□□ -1.96
CSDE1-212ENST00000529046 ATP6V0CP27449 155 aa2.78□□□□□ -1.96
CSDE1-212ENST00000529046 GCHFRP30047 84 aa2.78□□□□□ -1.96
CSDE1-212ENST00000529046 FUSP35637 526 aaKnown RBP eCLIP2.78□□□□□ -1.96
CSDE1-212ENST00000529046 DEFA1P59665 94 aa2.78□□□□□ -1.96
CSDE1-212ENST00000529046 DEFA3P59666 94 aa2.78□□□□□ -1.96
CSDE1-212ENST00000529046 ELOBQ15370 118 aa2.78□□□□□ -1.96
CSDE1-212ENST00000529046 LINC00173Q6ZV60 143 aa2.78□□□□□ -1.96
CSDE1-212ENST00000529046 HIST1H2BAQ96A08 127 aa2.78□□□□□ -1.96
CSDE1-212ENST00000529046 RMI2Q96E14 147 aa2.78□□□□□ -1.96
CSDE1-212ENST00000529046 MRAP2Q96G30 205 aa2.78□□□□□ -1.96
CSDE1-212ENST00000529046 ZFP30Q9Y2G7 519 aa2.78□□□□□ -1.96
CSDE1-212ENST00000529046 IGHV3OR16-9A0A0B4J2B5 98 aa2.77□□□□□ -1.97
CSDE1-212ENST00000529046 SSNA1O43805 119 aa2.77□□□□□ -1.97
CSDE1-212ENST00000529046 IGLV2-8P01709 118 aa2.77□□□□□ -1.97
CSDE1-212ENST00000529046 CXCL1P09341 107 aa2.77□□□□□ -1.97
CSDE1-212ENST00000529046 ASIPP42127 132 aa2.77□□□□□ -1.97
CSDE1-212ENST00000529046 KRTAP10-4P60372 401 aaPredicted RBP2.77□□□□□ -1.97
CSDE1-212ENST00000529046 RAB2AP61019 212 aa2.77□□□□□ -1.97
CSDE1-212ENST00000529046 PKIAP61925 76 aa2.77□□□□□ -1.97
CSDE1-212ENST00000529046 CACNG7P62955 275 aa2.77□□□□□ -1.97
CSDE1-212ENST00000529046 GNG5P63218 68 aa2.77□□□□□ -1.97
CSDE1-212ENST00000529046 PRR3P79522 188 aaKnown RBP2.77□□□□□ -1.97
CSDE1-212ENST00000529046 Q0VG73 95 aa2.77□□□□□ -1.97
CSDE1-212ENST00000529046 NIT1Q86X76 327 aa2.77□□□□□ -1.97
CSDE1-212ENST00000529046 SFRP2Q96HF1 295 aa2.77□□□□□ -1.97
CSDE1-212ENST00000529046 CHAC1Q9BUX1 264 aa2.77□□□□□ -1.97
CSDE1-212ENST00000529046 ARL2-SNX15V9GYD0 113 aa2.77□□□□□ -1.97
CSDE1-212ENST00000529046 TRBV7-3A0A075B6L6 115 aa2.76□□□□□ -1.97
CSDE1-212ENST00000529046 IGHV3-73A0A0B4J1V6 119 aa2.76□□□□□ -1.97
CSDE1-212ENST00000529046 KRBOX1C9JBD0 128 aa2.76□□□□□ -1.97
CSDE1-212ENST00000529046 IGHV3-30P01768 117 aa2.76□□□□□ -1.97
CSDE1-212ENST00000529046 IGHV3-33P01772 117 aa2.76□□□□□ -1.97
CSDE1-212ENST00000529046 IGHV3-30-3P0DP02 117 aa2.76□□□□□ -1.97
CSDE1-212ENST00000529046 IGHV3-30-5P0DP03 117 aa2.76□□□□□ -1.97
CSDE1-212ENST00000529046 S100A4P26447 101 aaKnown RBP2.76□□□□□ -1.97
CSDE1-212ENST00000529046 NMUP48645 174 aa2.76□□□□□ -1.97
CSDE1-212ENST00000529046 CRIP1P50238 77 aa2.76□□□□□ -1.97
CSDE1-212ENST00000529046 REG3AQ06141 175 aa2.76□□□□□ -1.97
CSDE1-212ENST00000529046 WFDC2Q14508 124 aa2.76□□□□□ -1.97
CSDE1-212ENST00000529046 LGALSLQ3ZCW2 172 aaPredicted RBP2.76□□□□□ -1.97
CSDE1-212ENST00000529046 TMEM97Q5BJF2 176 aa2.76□□□□□ -1.97
CSDE1-212ENST00000529046 COA6Q5JTJ3 125 aaKnown RBP2.76□□□□□ -1.97
CSDE1-212ENST00000529046 DAZ4Q86SG3 579 aaKnown RBP2.76□□□□□ -1.97
CSDE1-212ENST00000529046 PRNTQ86SH4 94 aa2.76□□□□□ -1.97
CSDE1-212ENST00000529046 FMC1Q96HJ9 113 aa2.76□□□□□ -1.97
CSDE1-212ENST00000529046 SMIM3Q9BZL3 60 aa2.76□□□□□ -1.97
CSDE1-212ENST00000529046 VAX2Q9UIW0 290 aa2.76□□□□□ -1.97
CSDE1-212ENST00000529046 DNAH8Q96JB1 4490 aa2.76□□□□□ -1.97
CSDE1-212ENST00000529046 HMCN2Q8NDA2 5059 aa2.75□□□□□ -1.97
CSDE1-212ENST00000529046 IGLV4-69A0A075B6H9 119 aa2.75□□□□□ -1.97
CSDE1-212ENST00000529046 A0A087WX48 190 aa2.75□□□□□ -1.97
CSDE1-212ENST00000529046 TRBV6-8A0A0A6YYG3 113 aa2.75□□□□□ -1.97
CSDE1-212ENST00000529046 BORCS7-ASMTA0A0B4J1R7 106 aa2.75□□□□□ -1.97
CSDE1-212ENST00000529046 CTXND1A0A1B0GTU2 59 aa2.75□□□□□ -1.97
CSDE1-212ENST00000529046 RBFOX3A6NFN3 312 aa2.75□□□□□ -1.97
CSDE1-212ENST00000529046 B4DEV8 164 aa2.75□□□□□ -1.97
CSDE1-212ENST00000529046 TCAPO15273 167 aa2.75□□□□□ -1.97
CSDE1-212ENST00000529046 LTAP01374 205 aa2.75□□□□□ -1.97
CSDE1-212ENST00000529046 GIPP09681 153 aaPredicted RBP2.75□□□□□ -1.97
CSDE1-212ENST00000529046 ARMS2P0C7Q2 107 aa2.75□□□□□ -1.97
CSDE1-212ENST00000529046 RAB4BP61018 213 aa2.75□□□□□ -1.97
CSDE1-212ENST00000529046 UBE2D3P61077 147 aa2.75□□□□□ -1.97
CSDE1-212ENST00000529046 HERVK_113P61574 105 aa2.75□□□□□ -1.97
CSDE1-212ENST00000529046 UBE2D2P62837 147 aa2.75□□□□□ -1.97
CSDE1-212ENST00000529046 FAM162BQ5T6X4 162 aa2.75□□□□□ -1.97
CSDE1-212ENST00000529046 PP632Q6XCG6 107 aa2.75□□□□□ -1.97
CSDE1-212ENST00000529046 SCXQ7RTU7 201 aa2.75□□□□□ -1.97
CSDE1-212ENST00000529046 LINC01551Q86U37 167 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms