RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.73□□□□□ -1.01
CAPN1-207ENST00000527189 SMIM15Q7Z3B0 74 aa8.73□□□□□ -1.01
CAPN1-207ENST00000527189 HIST1H2BHQ93079 126 aa8.73□□□□□ -1.01
CAPN1-207ENST00000527189 HIST1H2BNQ99877 126 aa8.73□□□□□ -1.01
CAPN1-207ENST00000527189 HIST1H2BMQ99879 126 aa8.73□□□□□ -1.01
CAPN1-207ENST00000527189 TRAV8-4A0A0B4J246 113 aa8.72□□□□□ -1.01
CAPN1-207ENST00000527189 C5orf52A6NGY3 159 aa8.72□□□□□ -1.01
CAPN1-207ENST00000527189 USP17L23D6RBM5 183 aa8.72□□□□□ -1.01
CAPN1-207ENST00000527189 TWIST1Q15672 202 aa8.72□□□□□ -1.01
CAPN1-207ENST00000527189 SCXQ7RTU7 201 aa8.72□□□□□ -1.01
CAPN1-207ENST00000527189 LINC00528Q8N1L1 170 aa8.72□□□□□ -1.01
CAPN1-207ENST00000527189 TMEM243Q9BU79 118 aa8.72□□□□□ -1.01
CAPN1-207ENST00000527189 CAMPP49913 170 aa8.71□□□□□ -1.02
CAPN1-207ENST00000527189 REG3AQ06141 175 aa8.71□□□□□ -1.02
CAPN1-207ENST00000527189 KRTAP26-1Q6PEX3 210 aa8.71□□□□□ -1.02
CAPN1-207ENST00000527189 BAGE3Q86Y29 109 aa8.71□□□□□ -1.02
CAPN1-207ENST00000527189 FOXA3P55318 350 aaPredicted RBP8.7□□□□□ -1.02
CAPN1-207ENST00000527189 COTL1Q14019 142 aa8.7□□□□□ -1.02
CAPN1-207ENST00000527189 TMEM136Q6ZRR5 245 aa8.7□□□□□ -1.02
CAPN1-207ENST00000527189 DEFB104AQ8WTQ1 72 aa8.7□□□□□ -1.02
CAPN1-207ENST00000527189 TMEM18Q96B42 140 aa8.7□□□□□ -1.02
CAPN1-207ENST00000527189 PRSS1P07477 247 aa8.69□□□□□ -1.02
CAPN1-207ENST00000527189 C9orf163Q8N9P6 203 aa8.69□□□□□ -1.02
CAPN1-207ENST00000527189 C20orf203Q8NBC4 194 aa8.69□□□□□ -1.02
CAPN1-207ENST00000527189 CIRBP-AS1Q8TBR5 109 aa8.69□□□□□ -1.02
CAPN1-207ENST00000527189 UBE2L6O14933 153 aa8.68□□□□□ -1.02
CAPN1-207ENST00000527189 CLPSL2Q6UWE3 100 aa8.68□□□□□ -1.02
CAPN1-207ENST00000527189 GATD1Q8NB37 220 aa8.68□□□□□ -1.02
CAPN1-207ENST00000527189 GTSF1Q8WW33 167 aa8.68□□□□□ -1.02
CAPN1-207ENST00000527189 IGLV4-60A0A075B6I1 120 aa8.67□□□□□ -1.02
CAPN1-207ENST00000527189 A0A1B0GXF2 115 aa8.67□□□□□ -1.02
CAPN1-207ENST00000527189 NCR2O95944 276 aa8.67□□□□□ -1.02
CAPN1-207ENST00000527189 SMIM6P0DI80 62 aa8.67□□□□□ -1.02
CAPN1-207ENST00000527189 AMTP48728 403 aa8.67□□□□□ -1.02
CAPN1-207ENST00000527189 COA6Q5JTJ3 125 aaKnown RBP8.67□□□□□ -1.02
CAPN1-207ENST00000527189 H7C423 109 aa8.66□□□□□ -1.02
CAPN1-207ENST00000527189 RNF213Q63HN8 5207 aa8.65□□□□□ -1.02
CAPN1-207ENST00000527189 IGLV10-54A0A075B6I4 117 aa8.65□□□□□ -1.02
CAPN1-207ENST00000527189 KRTAP29-1A8MX34 341 aaPredicted RBP8.65□□□□□ -1.02
CAPN1-207ENST00000527189 PHOX2AO14813 284 aa8.65□□□□□ -1.02
CAPN1-207ENST00000527189 CNBPP62633 177 aaKnown RBP8.65□□□□□ -1.02
CAPN1-207ENST00000527189 HIST3H2BBQ8N257 126 aa8.65□□□□□ -1.02
CAPN1-207ENST00000527189 TRAV26-2A0A0B4J265 109 aa8.64□□□□□ -1.03
CAPN1-207ENST00000527189 J3QL48 77 aa8.64□□□□□ -1.03
CAPN1-207ENST00000527189 FABP4P15090 132 aa8.64□□□□□ -1.03
CAPN1-207ENST00000527189 PDZD11Q5EBL8 140 aa8.64□□□□□ -1.03
CAPN1-207ENST00000527189 SDIM1Q6ZPB5 146 aa8.64□□□□□ -1.03
CAPN1-207ENST00000527189 LRP1Q07954 4544 aaKnown RBP8.64□□□□□ -1.03
CAPN1-207ENST00000527189 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.63□□□□□ -1.03
CAPN1-207ENST00000527189 TRBV6-5A0A0K0K1A5 114 aa8.63□□□□□ -1.03
CAPN1-207ENST00000527189 KRTAP10-4P60372 401 aaPredicted RBP8.63□□□□□ -1.03
CAPN1-207ENST00000527189 PACRGQ96M98 296 aaPredicted RBP8.63□□□□□ -1.03
CAPN1-207ENST00000527189 AP5S1Q9NUS5 200 aa8.63□□□□□ -1.03
CAPN1-207ENST00000527189 hDV102S1A0JD36 115 aa8.62□□□□□ -1.03
CAPN1-207ENST00000527189 SDHAF1A6NFY7 115 aa8.62□□□□□ -1.03
CAPN1-207ENST00000527189 HSBP1O75506 76 aa8.62□□□□□ -1.03
CAPN1-207ENST00000527189 PPBPP02775 128 aa8.62□□□□□ -1.03
CAPN1-207ENST00000527189 RAB4AP20338 218 aa8.62□□□□□ -1.03
CAPN1-207ENST00000527189 KIAA1644Q3SXP7 199 aa8.62□□□□□ -1.03
CAPN1-207ENST00000527189 CFAP161Q6P656 301 aa8.62□□□□□ -1.03
CAPN1-207ENST00000527189 RPL39LQ96EH5 51 aaKnown RBP8.62□□□□□ -1.03
CAPN1-207ENST00000527189 TMEM191AQ9H0A3 160 aa8.62□□□□□ -1.03
CAPN1-207ENST00000527189 I3L3M4 83 aa8.61□□□□□ -1.03
CAPN1-207ENST00000527189 ZNF25P17030 456 aaPredicted RBP8.61□□□□□ -1.03
CAPN1-207ENST00000527189 PMCHP20382 165 aa8.61□□□□□ -1.03
CAPN1-207ENST00000527189 AMMECR1LQ6DCA0 310 aa8.61□□□□□ -1.03
CAPN1-207ENST00000527189 ORMDL3Q8N138 153 aa8.61□□□□□ -1.03
CAPN1-207ENST00000527189 OR10D4PQ8NGN7 298 aa8.61□□□□□ -1.03
CAPN1-207ENST00000527189 LAMTOR2Q9Y2Q5 125 aa8.61□□□□□ -1.03
CAPN1-207ENST00000527189 CKS2P33552 79 aa8.6□□□□□ -1.03
CAPN1-207ENST00000527189 RNASEKQ6P5S7 137 aaKnown RBP8.6□□□□□ -1.03
CAPN1-207ENST00000527189 FA2HQ7L5A8 372 aa8.6□□□□□ -1.03
CAPN1-207ENST00000527189 CHCHD1Q96BP2 118 aaKnown RBP8.6□□□□□ -1.03
CAPN1-207ENST00000527189 ALKBH7Q9BT30 221 aaPredicted RBP8.6□□□□□ -1.03
CAPN1-207ENST00000527189 IGHV3-64A0A075B6Q5 118 aa8.59□□□□□ -1.03
CAPN1-207ENST00000527189 SERF1AO75920 110 aa8.59□□□□□ -1.03
CAPN1-207ENST00000527189 OXTP01178 125 aa8.59□□□□□ -1.03
CAPN1-207ENST00000527189 FGF6P10767 208 aa8.59□□□□□ -1.03
CAPN1-207ENST00000527189 ESDP10768 282 aa8.59□□□□□ -1.03
CAPN1-207ENST00000527189 S100A12P80511 92 aa8.59□□□□□ -1.03
CAPN1-207ENST00000527189 CIRBPQ14011 172 aaKnown RBP8.59□□□□□ -1.03
CAPN1-207ENST00000527189 FAM104BQ5XKR9 115 aa8.59□□□□□ -1.03
CAPN1-207ENST00000527189 C18orf32Q8TCD1 76 aa8.59□□□□□ -1.03
CAPN1-207ENST00000527189 C12orf57Q99622 126 aa8.59□□□□□ -1.03
CAPN1-207ENST00000527189 HIST1H2BLQ99880 126 aa8.59□□□□□ -1.03
CAPN1-207ENST00000527189 ST20Q9HBF5 79 aa8.59□□□□□ -1.03
CAPN1-207ENST00000527189 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.59□□□□□ -1.03
CAPN1-207ENST00000527189 FAT3Q8TDW7 4589 aa8.59□□□□□ -1.03
CAPN1-207ENST00000527189 GAGE12HA6NDE8 117 aa8.58□□□□□ -1.04
CAPN1-207ENST00000527189 PPP1R17O96001 155 aa8.58□□□□□ -1.04
CAPN1-207ENST00000527189 SLPIP03973 132 aa8.58□□□□□ -1.04
CAPN1-207ENST00000527189 RPL37AP61513 92 aaKnown RBP8.58□□□□□ -1.04
CAPN1-207ENST00000527189 PRSS3P2Q8NHM4 247 aa8.58□□□□□ -1.04
CAPN1-207ENST00000527189 MRAP2Q96G30 205 aa8.58□□□□□ -1.04
CAPN1-207ENST00000527189 RNF185Q96GF1 192 aa8.58□□□□□ -1.04
CAPN1-207ENST00000527189 PRELID3AQ96N28 172 aa8.58□□□□□ -1.04
CAPN1-207ENST00000527189 MAP1LC3AQ9H492 121 aa8.58□□□□□ -1.04
CAPN1-207ENST00000527189 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.57□□□□□ -1.04
CAPN1-207ENST00000527189 IGKV2-29A2NJV5 120 aaPredicted RBP8.57□□□□□ -1.04
CAPN1-207ENST00000527189 POLR2KP53803 58 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms