RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 Q9HAA7 133 aa7.14□□□□□ -1.27
NEDD8-205ENST00000527046 TRAV8-3A0A0A6YYJ7 113 aa7.13□□□□□ -1.27
NEDD8-205ENST00000527046 NUPR1O60356 82 aa7.13□□□□□ -1.27
NEDD8-205ENST00000527046 Q0VG73 95 aa7.13□□□□□ -1.27
NEDD8-205ENST00000527046 RNASE13Q5GAN3 156 aaKnown RBP7.13□□□□□ -1.27
NEDD8-205ENST00000527046 RNASEKQ6P5S7 137 aaKnown RBP7.13□□□□□ -1.27
NEDD8-205ENST00000527046 C2orf66Q6UXQ4 117 aa7.13□□□□□ -1.27
NEDD8-205ENST00000527046 ZNF664Q8N3J9 261 aa7.13□□□□□ -1.27
NEDD8-205ENST00000527046 PYGO1Q9Y3Y4 419 aa7.13□□□□□ -1.27
NEDD8-205ENST00000527046 PRSS29PA6NIE9 313 aa7.12□□□□□ -1.27
NEDD8-205ENST00000527046 LINC00614P0C842 121 aa7.12□□□□□ -1.27
NEDD8-205ENST00000527046 MRPS36P82909 103 aaKnown RBP7.12□□□□□ -1.27
NEDD8-205ENST00000527046 ORMDL2Q53FV1 153 aa7.12□□□□□ -1.27
NEDD8-205ENST00000527046 AMMECR1LQ6DCA0 310 aa7.12□□□□□ -1.27
NEDD8-205ENST00000527046 Q6ZUT4 128 aa7.12□□□□□ -1.27
NEDD8-205ENST00000527046 LINC00173Q6ZV60 143 aa7.12□□□□□ -1.27
NEDD8-205ENST00000527046 NFE4Q86UQ8 179 aa7.12□□□□□ -1.27
NEDD8-205ENST00000527046 OR5A1Q8NGJ0 315 aa7.12□□□□□ -1.27
NEDD8-205ENST00000527046 TOMM6Q96B49 74 aa7.12□□□□□ -1.27
NEDD8-205ENST00000527046 IGLV4-3A0A075B6K6 122 aa7.11□□□□□ -1.27
NEDD8-205ENST00000527046 LINC00959A0A1B0GUT2 108 aa7.11□□□□□ -1.27
NEDD8-205ENST00000527046 MIAQ16674 131 aa7.11□□□□□ -1.27
NEDD8-205ENST00000527046 ZC2HC1BQ5TFG8 222 aa7.11□□□□□ -1.27
NEDD8-205ENST00000527046 LINC00336Q6ZUF6 198 aa7.11□□□□□ -1.27
NEDD8-205ENST00000527046 SPANXA1Q9NS26 97 aa7.11□□□□□ -1.27
NEDD8-205ENST00000527046 DNAH11Q96DT5 4516 aa7.1□□□□□ -1.27
NEDD8-205ENST00000527046 IGLV10-54A0A075B6I4 117 aa7.1□□□□□ -1.27
NEDD8-205ENST00000527046 A0A087WTM6 91 aa7.1□□□□□ -1.27
NEDD8-205ENST00000527046 HIST1H2BKO60814 126 aa7.1□□□□□ -1.27
NEDD8-205ENST00000527046 HIST1H2BJP06899 126 aa7.1□□□□□ -1.27
NEDD8-205ENST00000527046 HIST1H2BOP23527 126 aa7.1□□□□□ -1.27
NEDD8-205ENST00000527046 HIST1H2BBP33778 126 aa7.1□□□□□ -1.27
NEDD8-205ENST00000527046 HIST1H2BDP58876 126 aa7.1□□□□□ -1.27
NEDD8-205ENST00000527046 HIST1H2BCP62807 126 aa7.1□□□□□ -1.27
NEDD8-205ENST00000527046 HIST2H2BEQ16778 126 aa7.1□□□□□ -1.27
NEDD8-205ENST00000527046 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.1□□□□□ -1.27
NEDD8-205ENST00000527046 HIST1H2BHQ93079 126 aa7.1□□□□□ -1.27
NEDD8-205ENST00000527046 TMEM18Q96B42 140 aa7.1□□□□□ -1.27
NEDD8-205ENST00000527046 AMELXQ99217 191 aa7.1□□□□□ -1.27
NEDD8-205ENST00000527046 HIST1H2BNQ99877 126 aa7.1□□□□□ -1.27
NEDD8-205ENST00000527046 HIST1H2BMQ99879 126 aa7.1□□□□□ -1.27
NEDD8-205ENST00000527046 CYSLTR1Q9Y271 337 aa7.1□□□□□ -1.27
NEDD8-205ENST00000527046 IGKV2D-24A0A075B6R9 120 aa7.09□□□□□ -1.27
NEDD8-205ENST00000527046 TRAV8-4A0A0B4J246 113 aa7.09□□□□□ -1.27
NEDD8-205ENST00000527046 PMCHL1Q16048 86 aa7.09□□□□□ -1.27
NEDD8-205ENST00000527046 PDZD11Q5EBL8 140 aa7.09□□□□□ -1.27
NEDD8-205ENST00000527046 FA2HQ7L5A8 372 aa7.09□□□□□ -1.27
NEDD8-205ENST00000527046 BAALCQ8WXS3 180 aa7.09□□□□□ -1.27
NEDD8-205ENST00000527046 TMEM101Q96IK0 257 aa7.09□□□□□ -1.27
NEDD8-205ENST00000527046 AP5S1Q9NUS5 200 aa7.09□□□□□ -1.27
NEDD8-205ENST00000527046 PKD1P98161 4303 aa7.09□□□□□ -1.27
NEDD8-205ENST00000527046 IGKV3OR2-268A0A0C4DH90 116 aa7.08□□□□□ -1.28
NEDD8-205ENST00000527046 KRTAP10-2P60368 255 aa7.08□□□□□ -1.28
NEDD8-205ENST00000527046 FOXI1Q12951 378 aa7.08□□□□□ -1.28
NEDD8-205ENST00000527046 DGAT2L7PQ6IED9 249 aa7.08□□□□□ -1.28
NEDD8-205ENST00000527046 PGPEP1Q9NXJ5 209 aa7.08□□□□□ -1.28
NEDD8-205ENST00000527046 FRAS1Q86XX4 4008 aa7.08□□□□□ -1.28
NEDD8-205ENST00000527046 SERF1AO75920 110 aa7.07□□□□□ -1.28
NEDD8-205ENST00000527046 CRPP02741 224 aa7.07□□□□□ -1.28
NEDD8-205ENST00000527046 NPSP0C0P6 89 aa7.07□□□□□ -1.28
NEDD8-205ENST00000527046 FUSP35637 526 aaKnown RBP eCLIP7.07□□□□□ -1.28
NEDD8-205ENST00000527046 ERASQ7Z444 233 aa7.07□□□□□ -1.28
NEDD8-205ENST00000527046 NTN5Q8WTR8 489 aaPredicted RBP7.07□□□□□ -1.28
NEDD8-205ENST00000527046 CHCHD10Q8WYQ3 142 aaPredicted RBP7.07□□□□□ -1.28
NEDD8-205ENST00000527046 CHCHD1Q96BP2 118 aaKnown RBP7.07□□□□□ -1.28
NEDD8-205ENST00000527046 TIMM17AQ99595 171 aa7.07□□□□□ -1.28
NEDD8-205ENST00000527046 C1orf43Q9BWL3 253 aa7.07□□□□□ -1.28
NEDD8-205ENST00000527046 TM2D2Q9BX73 214 aa7.07□□□□□ -1.28
NEDD8-205ENST00000527046 KRTAP17-1Q9BYP8 105 aa7.07□□□□□ -1.28
NEDD8-205ENST00000527046 BIRC6Q9NR09 4857 aa7.06□□□□□ -1.28
NEDD8-205ENST00000527046 GAGE12HA6NDE8 117 aa7.06□□□□□ -1.28
NEDD8-205ENST00000527046 LECT2O14960 151 aa7.06□□□□□ -1.28
NEDD8-205ENST00000527046 CCL25O15444 150 aa7.06□□□□□ -1.28
NEDD8-205ENST00000527046 RAB5BP61020 215 aa7.06□□□□□ -1.28
NEDD8-205ENST00000527046 COX6A2Q02221 97 aa7.06□□□□□ -1.28
NEDD8-205ENST00000527046 LINC00242Q5T6M2 205 aa7.06□□□□□ -1.28
NEDD8-205ENST00000527046 FAM19A2Q8N3H0 131 aa7.06□□□□□ -1.28
NEDD8-205ENST00000527046 TMEM141Q96I45 108 aa7.06□□□□□ -1.28
NEDD8-205ENST00000527046 SCGB3A1Q96QR1 104 aa7.06□□□□□ -1.28
NEDD8-205ENST00000527046 COX11Q9Y6N1 276 aa7.06□□□□□ -1.28
NEDD8-205ENST00000527046 EPPK1P58107 5090 aaKnown RBP7.06□□□□□ -1.28
NEDD8-205ENST00000527046 TRAV13-1A0A0B4J241 112 aa7.05□□□□□ -1.28
NEDD8-205ENST00000527046 IGHV3OR16-9A0A0B4J2B5 98 aa7.05□□□□□ -1.28
NEDD8-205ENST00000527046 HBDP02042 147 aa7.05□□□□□ -1.28
NEDD8-205ENST00000527046 SLPIP03973 132 aa7.05□□□□□ -1.28
NEDD8-205ENST00000527046 G0S2P27469 103 aa7.05□□□□□ -1.28
NEDD8-205ENST00000527046 UBE2D1P51668 147 aa7.05□□□□□ -1.28
NEDD8-205ENST00000527046 FAM19A3Q7Z5A8 133 aa7.05□□□□□ -1.28
NEDD8-205ENST00000527046 BAGE3Q86Y29 109 aa7.05□□□□□ -1.28
NEDD8-205ENST00000527046 RMI2Q96E14 147 aa7.05□□□□□ -1.28
NEDD8-205ENST00000527046 C1orf196B1AJZ1 125 aa7.04□□□□□ -1.28
NEDD8-205ENST00000527046 PRSS1P07477 247 aa7.04□□□□□ -1.28
NEDD8-205ENST00000527046 XCL1P47992 114 aa7.04□□□□□ -1.28
NEDD8-205ENST00000527046 SMAGPQ0VAQ4 97 aa7.04□□□□□ -1.28
NEDD8-205ENST00000527046 COA6Q5JTJ3 125 aaKnown RBP7.04□□□□□ -1.28
NEDD8-205ENST00000527046 CD164L2Q6UWJ8 174 aa7.04□□□□□ -1.28
NEDD8-205ENST00000527046 Q8N814 137 aa7.04□□□□□ -1.28
NEDD8-205ENST00000527046 C15orf56Q8N910 161 aa7.04□□□□□ -1.28
NEDD8-205ENST00000527046 USP17L23D6RBM5 183 aa7.03□□□□□ -1.28
NEDD8-205ENST00000527046 PSCAO43653 123 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms