RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 SNHG12Q9BXW3 62 aa0.65□□□□□ -2.31
COPB1-203ENST00000525214 DPY30Q9C005 99 aa0.65□□□□□ -2.31
COPB1-203ENST00000525214 C10orf95Q9H7T3 257 aa0.65□□□□□ -2.31
COPB1-203ENST00000525214 PROK2Q9HC23 129 aa0.65□□□□□ -2.31
COPB1-203ENST00000525214 GAPVD1Q14C86 1478 aa0.65□□□□□ -2.31
COPB1-203ENST00000525214 ABCC10Q5T3U5 1492 aa0.65□□□□□ -2.31
COPB1-203ENST00000525214 TEX14Q8IWB6 1497 aa0.65□□□□□ -2.31
COPB1-203ENST00000525214 LAMC3Q9Y6N6 1575 aa0.65□□□□□ -2.31
COPB1-203ENST00000525214 DOPEY2Q9Y3R5 2298 aa0.64□□□□□ -2.31
COPB1-203ENST00000525214 CC2D2AQ9P2K1 1620 aa0.64□□□□□ -2.31
COPB1-203ENST00000525214 ANKRD17O75179 2603 aaKnown RBP0.64□□□□□ -2.31
COPB1-203ENST00000525214 CTXND1A0A1B0GTU2 59 aa0.64□□□□□ -2.31
COPB1-203ENST00000525214 CRYM-AS1A6NIL9 109 aa0.64□□□□□ -2.31
COPB1-203ENST00000525214 F8VRH5 84 aa0.64□□□□□ -2.31
COPB1-203ENST00000525214 HMGN4O00479 90 aa0.64□□□□□ -2.31
COPB1-203ENST00000525214 UBE2D3P61077 147 aa0.64□□□□□ -2.31
COPB1-203ENST00000525214 UBE2D2P62837 147 aa0.64□□□□□ -2.31
COPB1-203ENST00000525214 UBA52P62987 128 aaKnown RBP0.64□□□□□ -2.31
COPB1-203ENST00000525214 Q0VG73 95 aa0.64□□□□□ -2.31
COPB1-203ENST00000525214 BAGE2Q86Y30 109 aa0.64□□□□□ -2.31
COPB1-203ENST00000525214 MANBALQ9NQG1 85 aa0.64□□□□□ -2.31
COPB1-203ENST00000525214 CDC42SE2Q9NRR3 84 aa0.64□□□□□ -2.31
COPB1-203ENST00000525214 PRO1854Q9UHT4 67 aa0.64□□□□□ -2.31
COPB1-203ENST00000525214 MYOM1P52179 1685 aa0.64□□□□□ -2.31
COPB1-203ENST00000525214 TOPAZ1Q8N9V7 1692 aa0.64□□□□□ -2.31
COPB1-203ENST00000525214 ABCA3Q99758 1704 aa0.64□□□□□ -2.31
COPB1-203ENST00000525214 IFT172Q9UG01 1749 aa0.64□□□□□ -2.31
COPB1-203ENST00000525214 ZNF609O15014 1411 aa0.64□□□□□ -2.31
COPB1-203ENST00000525214 ABCC5O15440 1437 aa0.64□□□□□ -2.31
COPB1-203ENST00000525214 NSD3Q9BZ95 1437 aa0.64□□□□□ -2.31
COPB1-203ENST00000525214 DIP2CQ9Y2E4 1556 aa0.63□□□□□ -2.31
COPB1-203ENST00000525214 GOLGA3Q08378 1498 aa0.63□□□□□ -2.31
COPB1-203ENST00000525214 TRAV22A0A0B4J277 110 aa0.63□□□□□ -2.31
COPB1-203ENST00000525214 A0A0D9SG42 100 aa0.63□□□□□ -2.31
COPB1-203ENST00000525214 SEC11AP67812 179 aa0.63□□□□□ -2.31
COPB1-203ENST00000525214 CFAP126Q5VTH2 177 aa0.63□□□□□ -2.31
COPB1-203ENST00000525214 SFTA2Q6UW10 78 aa0.63□□□□□ -2.31
COPB1-203ENST00000525214 LINC01558Q9Y6Z2 57 aa0.63□□□□□ -2.31
COPB1-203ENST00000525214 ZMYM4Q5VZL5 1548 aa0.63□□□□□ -2.31
COPB1-203ENST00000525214 ZFHX3Q15911 3703 aa0.63□□□□□ -2.31
COPB1-203ENST00000525214 TROQ12816 1431 aaPredicted RBP0.63□□□□□ -2.31
COPB1-203ENST00000525214 FAM208BQ5VWN6 2430 aa0.63□□□□□ -2.31
COPB1-203ENST00000525214 AKAP12Q02952 1782 aa0.62□□□□□ -2.31
COPB1-203ENST00000525214 TET3O43151 1660 aa0.62□□□□□ -2.31
COPB1-203ENST00000525214 SPTBN2O15020 2390 aa0.62□□□□□ -2.31
COPB1-203ENST00000525214 ZNF236Q9UL36 1845 aa0.62□□□□□ -2.31
COPB1-203ENST00000525214 IGLC7A0M8Q6 106 aa0.62□□□□□ -2.31
COPB1-203ENST00000525214 ATOX1O00244 68 aa0.62□□□□□ -2.31
COPB1-203ENST00000525214 SFT2D2O95562 160 aa0.62□□□□□ -2.31
COPB1-203ENST00000525214 MGPP08493 103 aa0.62□□□□□ -2.31
COPB1-203ENST00000525214 TRAPPC2P0DI81 140 aa0.62□□□□□ -2.31
COPB1-203ENST00000525214 TRAPPC2BP0DI82 140 aa0.62□□□□□ -2.31
COPB1-203ENST00000525214 PMCHL2Q9BQD1 86 aa0.62□□□□□ -2.31
COPB1-203ENST00000525214 VAMP8Q9BV40 100 aa0.62□□□□□ -2.31
COPB1-203ENST00000525214 FAIMQ9NVQ4 179 aa0.62□□□□□ -2.31
COPB1-203ENST00000525214 AHNAKQ09666 5890 aaKnown RBP0.62□□□□□ -2.31
COPB1-203ENST00000525214 SSC5DA1L4H1 1573 aa0.62□□□□□ -2.31
COPB1-203ENST00000525214 MAGI1Q96QZ7 1491 aaPredicted RBP0.61□□□□□ -2.31
COPB1-203ENST00000525214 LRRC37A2A6NM11 1700 aa0.61□□□□□ -2.31
COPB1-203ENST00000525214 CHD1O14646 1710 aa0.61□□□□□ -2.31
COPB1-203ENST00000525214 BDP1A6H8Y1 2624 aa0.61□□□□□ -2.31
COPB1-203ENST00000525214 C2CD3Q4AC94 2353 aa0.61□□□□□ -2.31
COPB1-203ENST00000525214 PRDM15P57071 1507 aaPredicted RBP0.61□□□□□ -2.31
COPB1-203ENST00000525214 MACF1Q9UPN3 7388 aaKnown RBP0.61□□□□□ -2.31
COPB1-203ENST00000525214 Q9H521 79 aa0.61□□□□□ -2.31
COPB1-203ENST00000525214 NPVFQ9HCQ7 196 aa0.61□□□□□ -2.31
COPB1-203ENST00000525214 NXT2Q9NPJ8 142 aaKnown RBP0.61□□□□□ -2.31
COPB1-203ENST00000525214 CACNA1EQ15878 2313 aa0.61□□□□□ -2.31
COPB1-203ENST00000525214 TTC37Q6PGP7 1564 aa0.61□□□□□ -2.31
COPB1-203ENST00000525214 EHBP1L1Q8N3D4 1523 aa0.6□□□□□ -2.31
COPB1-203ENST00000525214 KIF21AQ7Z4S6 1674 aa0.6□□□□□ -2.31
COPB1-203ENST00000525214 SAA2P0DJI9 122 aaPredicted RBP0.6□□□□□ -2.31
COPB1-203ENST00000525214 ASIPP42127 132 aa0.6□□□□□ -2.31
COPB1-203ENST00000525214 GNG2P59768 71 aa0.6□□□□□ -2.31
COPB1-203ENST00000525214 UBE2DNLQ8IWF7 75 aa0.6□□□□□ -2.31
COPB1-203ENST00000525214 ARL2-SNX15V9GYD0 113 aa0.6□□□□□ -2.31
COPB1-203ENST00000525214 URB1O60287 2271 aaKnown RBP0.6□□□□□ -2.31
COPB1-203ENST00000525214 SHANK2Q9UPX8 1470 aa0.6□□□□□ -2.31
COPB1-203ENST00000525214 RAPGEF6Q8TEU7 1601 aa0.6□□□□□ -2.31
COPB1-203ENST00000525214 HMGXB3Q12766 1538 aa0.59□□□□□ -2.31
COPB1-203ENST00000525214 ANKRD36BQ8N2N9 1353 aa0.59□□□□□ -2.31
COPB1-203ENST00000525214 MUC5BQ9HC84 5762 aaPredicted RBP0.59□□□□□ -2.31
COPB1-203ENST00000525214 PDCD11Q14690 1871 aaKnown RBP0.59□□□□□ -2.31
COPB1-203ENST00000525214 ANKRD26Q9UPS8 1709 aa0.59□□□□□ -2.31
COPB1-203ENST00000525214 UNC13BO14795 1591 aa0.59□□□□□ -2.31
COPB1-203ENST00000525214 C10orf142B7Z368 130 aa0.59□□□□□ -2.31
COPB1-203ENST00000525214 G3V318 75 aa0.59□□□□□ -2.31
COPB1-203ENST00000525214 NMBP08949 121 aa0.59□□□□□ -2.31
COPB1-203ENST00000525214 IGLC1P0CG04 106 aa0.59□□□□□ -2.31
COPB1-203ENST00000525214 S100A3P33764 101 aa0.59□□□□□ -2.31
COPB1-203ENST00000525214 FAUP35544 74 aaKnown RBP0.59□□□□□ -2.31
COPB1-203ENST00000525214 SPINK7P58062 85 aa0.59□□□□□ -2.31
COPB1-203ENST00000525214 SPATA8Q6RVD6 105 aa0.59□□□□□ -2.31
COPB1-203ENST00000525214 SERP2Q8N6R1 65 aa0.59□□□□□ -2.31
COPB1-203ENST00000525214 TRGV9Q99603 122 aa0.59□□□□□ -2.31
COPB1-203ENST00000525214 FAM103A1Q9BTL3 118 aaKnown RBP0.59□□□□□ -2.31
COPB1-203ENST00000525214 V9GYS6 101 aa0.59□□□□□ -2.31
COPB1-203ENST00000525214 TOP2BQ02880 1626 aa0.59□□□□□ -2.32
COPB1-203ENST00000525214 ADGRL2O95490 1459 aa0.59□□□□□ -2.32
COPB1-203ENST00000525214 MLH3Q9UHC1 1453 aa0.59□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms