RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 PAX4O43316 350 aa14.54□□□□□ -0.08
SQLE-206ENST00000523430 ATP5G1P05496 136 aa14.54□□□□□ -0.08
SQLE-206ENST00000523430 VSIG2Q96IQ7 327 aa14.54□□□□□ -0.08
SQLE-206ENST00000523430 TRAV8-6A0A0B4J262 113 aa14.53□□□□□ -0.08
SQLE-206ENST00000523430 MRPS36P82909 103 aaKnown RBP14.53□□□□□ -0.08
SQLE-206ENST00000523430 TMEM170BQ5T4T1 132 aa14.53□□□□□ -0.08
SQLE-206ENST00000523430 TRBV6-8A0A0A6YYG3 113 aa14.52□□□□□ -0.08
SQLE-206ENST00000523430 E9PLD3 99 aa14.52□□□□□ -0.08
SQLE-206ENST00000523430 DGAT2L7PQ6IED9 249 aa14.52□□□□□ -0.08
SQLE-206ENST00000523430 UBE2L6O14933 153 aa14.52□□□□□ -0.09
SQLE-206ENST00000523430 HTN3P15516 51 aa14.52□□□□□ -0.09
SQLE-206ENST00000523430 HINT1P49773 126 aaPredicted RBP14.52□□□□□ -0.09
SQLE-206ENST00000523430 MAPKAPK5-AS1Q8N8E1 139 aa14.52□□□□□ -0.09
SQLE-206ENST00000523430 A0A096LPF7 62 aa14.51□□□□□ -0.09
SQLE-206ENST00000523430 ZNF22P17026 224 aaPredicted RBP14.51□□□□□ -0.09
SQLE-206ENST00000523430 ATP6V0E2Q8NHE4 81 aa14.51□□□□□ -0.09
SQLE-206ENST00000523430 TRAV26-1A0A087WT03 109 aa14.5□□□□□ -0.09
SQLE-206ENST00000523430 F5H768 121 aa14.5□□□□□ -0.09
SQLE-206ENST00000523430 TMEM97Q5BJF2 176 aa14.5□□□□□ -0.09
SQLE-206ENST00000523430 C2orf88Q9BSF0 95 aa14.5□□□□□ -0.09
SQLE-206ENST00000523430 CSDC2Q9Y534 153 aaKnown RBP14.5□□□□□ -0.09
SQLE-206ENST00000523430 K7EIL1 84 aa14.49□□□□□ -0.09
SQLE-206ENST00000523430 GAGE6Q13070 117 aa14.49□□□□□ -0.09
SQLE-206ENST00000523430 C12orf74Q32Q52 190 aa14.49□□□□□ -0.09
SQLE-206ENST00000523430 MPV17L2Q567V2 206 aa14.49□□□□□ -0.09
SQLE-206ENST00000523430 TEX48A0A1B0GUV7 120 aa14.48□□□□□ -0.09
SQLE-206ENST00000523430 HERVK_113P61574 105 aa14.48□□□□□ -0.09
SQLE-206ENST00000523430 AMMECR1LQ6DCA0 310 aa14.48□□□□□ -0.09
SQLE-206ENST00000523430 OR5A1Q8NGJ0 315 aa14.48□□□□□ -0.09
SQLE-206ENST00000523430 UBE2D1P51668 147 aa14.48□□□□□ -0.09
SQLE-206ENST00000523430 C11orf68Q9H3H3 251 aaKnown RBP14.48□□□□□ -0.09
SQLE-206ENST00000523430 LBHQ53QV2 105 aaPredicted RBP14.47□□□□□ -0.09
SQLE-206ENST00000523430 CHCHD5Q9BSY4 110 aa14.47□□□□□ -0.09
SQLE-206ENST00000523430 NOTCH1P46531 2555 aa14.47□□□□□ -0.09
SQLE-206ENST00000523430 TMEM223A0PJW6 202 aa14.46□□□□□ -0.09
SQLE-206ENST00000523430 H7C423 109 aa14.46□□□□□ -0.09
SQLE-206ENST00000523430 TSPEAR-AS2P59090 65 aa14.46□□□□□ -0.09
SQLE-206ENST00000523430 KPRPQ5T749 579 aaPredicted RBP14.46□□□□□ -0.09
SQLE-206ENST00000523430 CDC42SE2Q9NRR3 84 aa14.46□□□□□ -0.09
SQLE-206ENST00000523430 SIVA1O15304 175 aa14.46□□□□□ -0.1
SQLE-206ENST00000523430 IGHV3-64A0A075B6Q5 118 aa14.45□□□□□ -0.1
SQLE-206ENST00000523430 A0A0J9YWU9 116 aa14.45□□□□□ -0.1
SQLE-206ENST00000523430 TINCRA0A1B0GVN0 87 aa14.45□□□□□ -0.1
SQLE-206ENST00000523430 SMAGPQ0VAQ4 97 aa14.44□□□□□ -0.1
SQLE-206ENST00000523430 TMEM101Q96IK0 257 aa14.44□□□□□ -0.1
SQLE-206ENST00000523430 MYMXA0A1B0GTQ4 84 aa14.44□□□□□ -0.1
SQLE-206ENST00000523430 BVES-AS1Q5T3Y7 98 aa14.44□□□□□ -0.1
SQLE-206ENST00000523430 ZNF25P17030 456 aaPredicted RBP14.43□□□□□ -0.1
SQLE-206ENST00000523430 IGLV4-60A0A075B6I1 120 aa14.42□□□□□ -0.1
SQLE-206ENST00000523430 Q6ZTC4 211 aa14.42□□□□□ -0.1
SQLE-206ENST00000523430 TRAV13-1A0A0B4J241 112 aa14.42□□□□□ -0.1
SQLE-206ENST00000523430 ZNF815PA8K554 130 aa14.42□□□□□ -0.1
SQLE-206ENST00000523430 LINC00469Q8N7U9 141 aa14.42□□□□□ -0.1
SQLE-206ENST00000523430 HIGD1BQ9P298 99 aa14.42□□□□□ -0.1
SQLE-206ENST00000523430 NBEAL1Q6ZS30 2694 aa14.41□□□□□ -0.1
SQLE-206ENST00000523430 TENM3Q9P273 2699 aa14.41□□□□□ -0.1
SQLE-206ENST00000523430 DEFB121Q5J5C9 76 aa14.41□□□□□ -0.1
SQLE-206ENST00000523430 MRAPQ8TCY5 172 aa14.41□□□□□ -0.1
SQLE-206ENST00000523430 GEMIN7Q9H840 131 aaKnown RBP14.41□□□□□ -0.1
SQLE-206ENST00000523430 A0A1B0GV90 55 aa14.4□□□□□ -0.1
SQLE-206ENST00000523430 COX6A2Q02221 97 aa14.4□□□□□ -0.1
SQLE-206ENST00000523430 HSD52Q0P140 79 aa14.4□□□□□ -0.1
SQLE-206ENST00000523430 LINC00242Q5T6M2 205 aa14.4□□□□□ -0.1
SQLE-206ENST00000523430 TRAV8-3A0A0A6YYJ7 113 aa14.39□□□□□ -0.11
SQLE-206ENST00000523430 J3QQQ9 107 aa14.39□□□□□ -0.11
SQLE-206ENST00000523430 LEPROTO15243 131 aa14.39□□□□□ -0.11
SQLE-206ENST00000523430 COL5A1-AS1Q5SY13 56 aa14.39□□□□□ -0.11
SQLE-206ENST00000523430 PLEKHB2Q96CS7 222 aa14.39□□□□□ -0.11
SQLE-206ENST00000523430 SPATA25Q9BR10 227 aa14.39□□□□□ -0.11
SQLE-206ENST00000523430 CDKN2A-AS1Q9UH64 79 aa14.39□□□□□ -0.11
SQLE-206ENST00000523430 ICOSQ9Y6W8 199 aa14.39□□□□□ -0.11
SQLE-206ENST00000523430 HUWE1Q7Z6Z7 4374 aaKnown RBP14.39□□□□□ -0.11
SQLE-206ENST00000523430 IGLV5-45A0A087WSX0 123 aa14.38□□□□□ -0.11
SQLE-206ENST00000523430 SPINK8P0C7L1 97 aa14.38□□□□□ -0.11
SQLE-206ENST00000523430 TIRAPP58753 221 aa14.38□□□□□ -0.11
SQLE-206ENST00000523430 FAM19A3Q7Z5A8 133 aa14.38□□□□□ -0.11
SQLE-206ENST00000523430 TM2D3Q9BRN9 247 aa14.38□□□□□ -0.11
SQLE-206ENST00000523430 NANOS2P60321 138 aaKnown RBP14.38□□□□□ -0.11
SQLE-206ENST00000523430 MRPL23Q16540 153 aaKnown RBP14.38□□□□□ -0.11
SQLE-206ENST00000523430 LGALS3P17931 250 aaKnown RBP14.37□□□□□ -0.11
SQLE-206ENST00000523430 IGHV3-30-3P0DP02 117 aa14.36□□□□□ -0.11
SQLE-206ENST00000523430 IGKV3OR2-268A0A0C4DH90 116 aa14.35□□□□□ -0.11
SQLE-206ENST00000523430 TMEM262E9PQX1 116 aa14.35□□□□□ -0.11
SQLE-206ENST00000523430 HERVK_113P63121 156 aa14.35□□□□□ -0.11
SQLE-206ENST00000523430 MGAM2Q2M2H8 2515 aa14.35□□□□□ -0.11
SQLE-206ENST00000523430 IGHV1-58A0A0C4DH39 117 aa14.35□□□□□ -0.11
SQLE-206ENST00000523430 RBX1P62877 108 aa14.35□□□□□ -0.11
SQLE-206ENST00000523430 C11orf45Q8TAV5 145 aa14.35□□□□□ -0.11
SQLE-206ENST00000523430 SCGB1D4Q6XE38 83 aa14.34□□□□□ -0.11
SQLE-206ENST00000523430 Q8N3U1 123 aa14.33□□□□□ -0.11
SQLE-206ENST00000523430 SEC11AP67812 179 aa14.33□□□□□ -0.12
SQLE-206ENST00000523430 H3BRM9 83 aa14.32□□□□□ -0.12
SQLE-206ENST00000523430 A0A1B0GUV1 79 aa14.31□□□□□ -0.12
SQLE-206ENST00000523430 GCSHP23434 173 aa14.31□□□□□ -0.12
SQLE-206ENST00000523430 SH2D6Q7Z4S9 175 aa14.31□□□□□ -0.12
SQLE-206ENST00000523430 ORAOV1Q8WV07 137 aa14.31□□□□□ -0.12
SQLE-206ENST00000523430 K7EP13 123 aa14.3□□□□□ -0.12
SQLE-206ENST00000523430 CLPSL2Q6UWE3 100 aa14.3□□□□□ -0.12
SQLE-206ENST00000523430 Q6ZVH6 145 aa14.3□□□□□ -0.12
SQLE-206ENST00000523430 H3BNG1 76 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms