RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 Q6ZTI0 123 aa12.1□□□□□ -0.47
USP42-207ENST00000521713 C20orf197Q8N268 126 aa12.1□□□□□ -0.47
USP42-207ENST00000521713 ZNF80P51504 273 aaPredicted RBP12.1□□□□□ -0.47
USP42-207ENST00000521713 TIRAPP58753 221 aa12.1□□□□□ -0.47
USP42-207ENST00000521713 WDR87Q6ZQQ6 2873 aa12.09□□□□□ -0.47
USP42-207ENST00000521713 IGLV1-40P01703 118 aa12.09□□□□□ -0.47
USP42-207ENST00000521713 SERP2Q8N6R1 65 aa12.08□□□□□ -0.48
USP42-207ENST00000521713 DEFB105AQ8NG35 78 aa12.08□□□□□ -0.48
USP42-207ENST00000521713 USP9XQ93008 2570 aaPredicted RBP12.08□□□□□ -0.48
USP42-207ENST00000521713 TRAV23DV6A0A075B6W5 121 aa12.08□□□□□ -0.48
USP42-207ENST00000521713 SPAG11BQ08648 103 aa12.08□□□□□ -0.48
USP42-207ENST00000521713 IGKV2D-26A0A0A0MRZ7 120 aa12.08□□□□□ -0.48
USP42-207ENST00000521713 TMEM223A0PJW6 202 aa12.08□□□□□ -0.48
USP42-207ENST00000521713 MRPL55Q7Z7F7 128 aaKnown RBP12.08□□□□□ -0.48
USP42-207ENST00000521713 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.07□□□□□ -0.48
USP42-207ENST00000521713 ABCA12Q86UK0 2595 aa12.07□□□□□ -0.48
USP42-207ENST00000521713 AVPP01185 164 aa12.07□□□□□ -0.48
USP42-207ENST00000521713 V9GYY9 64 aa12.06□□□□□ -0.48
USP42-207ENST00000521713 DEFB131BA0A096LNP1 70 aa12.06□□□□□ -0.48
USP42-207ENST00000521713 NDUFS5O43920 106 aa12.06□□□□□ -0.48
USP42-207ENST00000521713 C20orf173Q96LM9 149 aa12.06□□□□□ -0.48
USP42-207ENST00000521713 C2CD3Q4AC94 2353 aa12.06□□□□□ -0.48
USP42-207ENST00000521713 C14orf177Q52M58 125 aa12.06□□□□□ -0.48
USP42-207ENST00000521713 MAPKAPK5-AS1Q8N8E1 139 aa12.06□□□□□ -0.48
USP42-207ENST00000521713 TLN2Q9Y4G6 2542 aa12.06□□□□□ -0.48
USP42-207ENST00000521713 CHKB-CPT1BH3BT56 60 aa12.05□□□□□ -0.48
USP42-207ENST00000521713 TRIAP1O43715 76 aa12.05□□□□□ -0.48
USP42-207ENST00000521713 TIMM17BO60830 172 aa12.05□□□□□ -0.48
USP42-207ENST00000521713 COX7CP15954 63 aa12.05□□□□□ -0.48
USP42-207ENST00000521713 LINC00482Q8N8I6 264 aa12.05□□□□□ -0.48
USP42-207ENST00000521713 ZNF22P17026 224 aaPredicted RBP12.04□□□□□ -0.48
USP42-207ENST00000521713 SDIM1Q6ZPB5 146 aa12.04□□□□□ -0.48
USP42-207ENST00000521713 PLXNB1O43157 2135 aa12.03□□□□□ -0.48
USP42-207ENST00000521713 UFSP1Q6NVU6 142 aa12.03□□□□□ -0.48
USP42-207ENST00000521713 ZFAND2AQ8N6M9 145 aa12.03□□□□□ -0.48
USP42-207ENST00000521713 A0A1W2PPR1 153 aa12.03□□□□□ -0.48
USP42-207ENST00000521713 MRPS12O15235 138 aaKnown RBP12.03□□□□□ -0.48
USP42-207ENST00000521713 XGP55808 180 aa12.03□□□□□ -0.48
USP42-207ENST00000521713 KIR2DL5BQ8NHK3 375 aa12.02□□□□□ -0.48
USP42-207ENST00000521713 BPY2O14599 106 aa12.01□□□□□ -0.49
USP42-207ENST00000521713 Q6ZS46 218 aa12.01□□□□□ -0.49
USP42-207ENST00000521713 USP9YO00507 2555 aaPredicted RBP12.01□□□□□ -0.49
USP42-207ENST00000521713 IGHV4-4A0A075B6R2 117 aa12.01□□□□□ -0.49
USP42-207ENST00000521713 IGHV4-28A0A0C4DH34 117 aa12.01□□□□□ -0.49
USP42-207ENST00000521713 NCR3O14931 201 aa12.01□□□□□ -0.49
USP42-207ENST00000521713 COX7BP24311 80 aa12.01□□□□□ -0.49
USP42-207ENST00000521713 LINC00308Q8TCZ7 52 aa12.01□□□□□ -0.49
USP42-207ENST00000521713 RNF185Q96GF1 192 aa12□□□□□ -0.49
USP42-207ENST00000521713 H7C423 109 aa12□□□□□ -0.49
USP42-207ENST00000521713 LST1O00453 97 aa12□□□□□ -0.49
USP42-207ENST00000521713 TRBV6-4A0A1B0GX49 114 aa11.99□□□□□ -0.49
USP42-207ENST00000521713 TRAV10A0A0B4J240 114 aa11.99□□□□□ -0.49
USP42-207ENST00000521713 GOLGB1Q14789 3259 aaKnown RBP11.99□□□□□ -0.49
USP42-207ENST00000521713 IGLV4-3A0A075B6K6 122 aa11.99□□□□□ -0.49
USP42-207ENST00000521713 CCDC179H3BU77 68 aa11.99□□□□□ -0.49
USP42-207ENST00000521713 DOPEY1Q5JWR5 2465 aa11.99□□□□□ -0.49
USP42-207ENST00000521713 SVIPQ8NHG7 77 aa11.98□□□□□ -0.49
USP42-207ENST00000521713 PYGO1Q9Y3Y4 419 aa11.98□□□□□ -0.49
USP42-207ENST00000521713 FASNP49327 2511 aaKnown RBP11.98□□□□□ -0.49
USP42-207ENST00000521713 IBA57-AS1B1ANH7 110 aa11.98□□□□□ -0.49
USP42-207ENST00000521713 SMR3AQ99954 134 aa11.98□□□□□ -0.49
USP42-207ENST00000521713 USP17L23D6RBM5 183 aa11.98□□□□□ -0.49
USP42-207ENST00000521713 FAM110AQ9BQ89 295 aa11.98□□□□□ -0.49
USP42-207ENST00000521713 ZNF462Q96JM2 2506 aa11.98□□□□□ -0.49
USP42-207ENST00000521713 Q8N976 141 aa11.98□□□□□ -0.49
USP42-207ENST00000521713 TRBV6-5A0A0K0K1A5 114 aa11.97□□□□□ -0.49
USP42-207ENST00000521713 PRB2P02812 416 aaPredicted RBP11.97□□□□□ -0.49
USP42-207ENST00000521713 MRPS36P82909 103 aaKnown RBP11.97□□□□□ -0.49
USP42-207ENST00000521713 REG3AQ06141 175 aa11.97□□□□□ -0.49
USP42-207ENST00000521713 CLUHP3Q96NS8 147 aa11.97□□□□□ -0.49
USP42-207ENST00000521713 BBC3Q96PG8 261 aaPredicted RBP11.97□□□□□ -0.49
USP42-207ENST00000521713 CRIP2P52943 208 aaPredicted RBP11.97□□□□□ -0.49
USP42-207ENST00000521713 C18orf65Q6ZTR6 163 aa11.97□□□□□ -0.49
USP42-207ENST00000521713 ARHGAP32A7KAX9 2087 aa11.96□□□□□ -0.49
USP42-207ENST00000521713 CRIP1P50238 77 aa11.96□□□□□ -0.49
USP42-207ENST00000521713 TNRC6BQ9UPQ9 1833 aaKnown RBP11.96□□□□□ -0.5
USP42-207ENST00000521713 KIAA1549Q9HCM3 1950 aa11.96□□□□□ -0.5
USP42-207ENST00000521713 LINC00269Q8N2A0 174 aa11.96□□□□□ -0.5
USP42-207ENST00000521713 TRBV27A0A0K0K1C4 114 aa11.95□□□□□ -0.5
USP42-207ENST00000521713 UBE2AP49459 152 aa11.95□□□□□ -0.5
USP42-207ENST00000521713 LINC00310P59036 64 aa11.95□□□□□ -0.5
USP42-207ENST00000521713 ENHOQ6UWT2 76 aa11.95□□□□□ -0.5
USP42-207ENST00000521713 CRYGDP07320 174 aa11.95□□□□□ -0.5
USP42-207ENST00000521713 ZNF580Q9UK33 172 aa11.95□□□□□ -0.5
USP42-207ENST00000521713 CDKN2A-AS1Q9UH64 79 aa11.95□□□□□ -0.5
USP42-207ENST00000521713 DSCAML1Q8TD84 2053 aa11.94□□□□□ -0.5
USP42-207ENST00000521713 LRRK2Q5S007 2527 aa11.94□□□□□ -0.5
USP42-207ENST00000521713 IGLV2-11P01706 119 aa11.94□□□□□ -0.5
USP42-207ENST00000521713 MPLKIPQ8TAP9 179 aa11.93□□□□□ -0.5
USP42-207ENST00000521713 Q6JHZ5 121 aa11.93□□□□□ -0.5
USP42-207ENST00000521713 KLLNB2CW77 178 aa11.93□□□□□ -0.5
USP42-207ENST00000521713 CEMP1Q6PRD7 247 aaPredicted RBP11.93□□□□□ -0.5
USP42-207ENST00000521713 DCANP1Q8TF63 244 aa11.93□□□□□ -0.5
USP42-207ENST00000521713 BRI3O95415 125 aa11.92□□□□□ -0.5
USP42-207ENST00000521713 TRBV6-8A0A0A6YYG3 113 aa11.92□□□□□ -0.5
USP42-207ENST00000521713 NRACQ8N912 160 aa11.92□□□□□ -0.5
USP42-207ENST00000521713 M0QY20 66 aa11.91□□□□□ -0.5
USP42-207ENST00000521713 C16orf95Q9H693 158 aa11.91□□□□□ -0.5
USP42-207ENST00000521713 SMIM26A0A096LP01 95 aa11.91□□□□□ -0.5
USP42-207ENST00000521713 CHCHD10Q8WYQ3 142 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms