RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 SH2D6Q7Z4S9 175 aa7.38□□□□□ -1.23
MCF2-209ENST00000520602 DAZ4Q86SG3 579 aaKnown RBP7.38□□□□□ -1.23
MCF2-209ENST00000520602 DAZ3Q9NR90 486 aaKnown RBP7.38□□□□□ -1.23
MCF2-209ENST00000520602 LINC01546A6NGU7 62 aa7.38□□□□□ -1.23
MCF2-209ENST00000520602 DAD1P61803 113 aa7.38□□□□□ -1.23
MCF2-209ENST00000520602 HERVK_113P63121 156 aa7.38□□□□□ -1.23
MCF2-209ENST00000520602 WFDC2Q14508 124 aa7.38□□□□□ -1.23
MCF2-209ENST00000520602 C9JAW5 83 aa7.38□□□□□ -1.23
MCF2-209ENST00000520602 GYPEP15421 78 aa7.38□□□□□ -1.23
MCF2-209ENST00000520602 RPL13AP40429 203 aaKnown RBP7.38□□□□□ -1.23
MCF2-209ENST00000520602 COPS9Q8WXC6 57 aa7.38□□□□□ -1.23
MCF2-209ENST00000520602 CDKN2A-AS1Q9UH64 79 aa7.38□□□□□ -1.23
MCF2-209ENST00000520602 RS1O15537 224 aa7.37□□□□□ -1.23
MCF2-209ENST00000520602 C6orf226Q5I0X4 101 aa7.37□□□□□ -1.23
MCF2-209ENST00000520602 IGLV4-69A0A075B6H9 119 aa7.37□□□□□ -1.23
MCF2-209ENST00000520602 TRAV4A0A0B4J268 109 aa7.37□□□□□ -1.23
MCF2-209ENST00000520602 SVEP1Q4LDE5 3571 aa7.37□□□□□ -1.23
MCF2-209ENST00000520602 F8P00451 2351 aa7.37□□□□□ -1.23
MCF2-209ENST00000520602 CELSR1Q9NYQ6 3014 aa7.37□□□□□ -1.23
MCF2-209ENST00000520602 LOC100131303A0A0U1RQF7 123 aa7.36□□□□□ -1.23
MCF2-209ENST00000520602 PAX4O43316 350 aa7.36□□□□□ -1.23
MCF2-209ENST00000520602 PFN2P35080 140 aa7.36□□□□□ -1.23
MCF2-209ENST00000520602 C9orf66Q5T8R8 295 aa7.36□□□□□ -1.23
MCF2-209ENST00000520602 C5orf38Q86SI9 138 aa7.36□□□□□ -1.23
MCF2-209ENST00000520602 ATRQ13535 2644 aa7.36□□□□□ -1.23
MCF2-209ENST00000520602 TEX48A0A1B0GUV7 120 aa7.36□□□□□ -1.23
MCF2-209ENST00000520602 TMEM223A0PJW6 202 aa7.36□□□□□ -1.23
MCF2-209ENST00000520602 MALP21145 153 aa7.36□□□□□ -1.23
MCF2-209ENST00000520602 NDUFA11Q86Y39 141 aa7.36□□□□□ -1.23
MCF2-209ENST00000520602 UNC79Q9P2D8 2635 aa7.36□□□□□ -1.23
MCF2-209ENST00000520602 IGHV1-58A0A0C4DH39 117 aa7.36□□□□□ -1.23
MCF2-209ENST00000520602 TRBV10-1A0A0K0K1A3 114 aa7.36□□□□□ -1.23
MCF2-209ENST00000520602 C3orf56Q8N813 242 aa7.36□□□□□ -1.23
MCF2-209ENST00000520602 VSIG2Q96IQ7 327 aa7.36□□□□□ -1.23
MCF2-209ENST00000520602 F8W1H4 67 aa7.35□□□□□ -1.23
MCF2-209ENST00000520602 ITPR2Q14571 2701 aa7.35□□□□□ -1.23
MCF2-209ENST00000520602 CFC1BP0CG36 223 aa7.35□□□□□ -1.23
MCF2-209ENST00000520602 CFC1P0CG37 223 aa7.35□□□□□ -1.23
MCF2-209ENST00000520602 XCL1P47992 114 aa7.35□□□□□ -1.23
MCF2-209ENST00000520602 APOC4P55056 127 aa7.35□□□□□ -1.23
MCF2-209ENST00000520602 TSPEAR-AS2P59090 65 aa7.35□□□□□ -1.23
MCF2-209ENST00000520602 IGLV1-51P01701 117 aa7.34□□□□□ -1.23
MCF2-209ENST00000520602 C10orf126Q8N4M7 172 aa7.34□□□□□ -1.23
MCF2-209ENST00000520602 ATP6V0E2Q8NHE4 81 aa7.34□□□□□ -1.23
MCF2-209ENST00000520602 A0A0J9YXY3 114 aa7.34□□□□□ -1.23
MCF2-209ENST00000520602 NDUFA7O95182 113 aa7.34□□□□□ -1.23
MCF2-209ENST00000520602 CFAP161Q6P656 301 aa7.34□□□□□ -1.23
MCF2-209ENST00000520602 KRTAP1-3Q8IUG1 177 aa7.34□□□□□ -1.23
MCF2-209ENST00000520602 GTSF1LQ9H1H1 148 aa7.34□□□□□ -1.23
MCF2-209ENST00000520602 UBE2D4Q9Y2X8 147 aa7.34□□□□□ -1.23
MCF2-209ENST00000520602 SS18Q15532 418 aa7.33□□□□□ -1.24
MCF2-209ENST00000520602 NFE4Q86UQ8 179 aa7.33□□□□□ -1.24
MCF2-209ENST00000520602 PYGO1Q9Y3Y4 419 aa7.33□□□□□ -1.24
MCF2-209ENST00000520602 CKS1BP61024 79 aa7.33□□□□□ -1.24
MCF2-209ENST00000520602 BSNQ9UPA5 3926 aa7.33□□□□□ -1.24
MCF2-209ENST00000520602 C11orf72Q8NBR9 251 aa7.33□□□□□ -1.24
MCF2-209ENST00000520602 TRBV20-1A0A075B6N2 111 aa7.33□□□□□ -1.24
MCF2-209ENST00000520602 TINCRA0A1B0GVN0 87 aa7.33□□□□□ -1.24
MCF2-209ENST00000520602 TSPAN13O95857 204 aa7.33□□□□□ -1.24
MCF2-209ENST00000520602 ANGP03950 147 aaKnown RBP7.32□□□□□ -1.24
MCF2-209ENST00000520602 APCP25054 2843 aa7.32□□□□□ -1.24
MCF2-209ENST00000520602 IGLV10-54A0A075B6I4 117 aa7.32□□□□□ -1.24
MCF2-209ENST00000520602 ATXN8Q156A1 80 aa7.32□□□□□ -1.24
MCF2-209ENST00000520602 FAM222AQ5U5X8 452 aa7.32□□□□□ -1.24
MCF2-209ENST00000520602 NF1P21359 2839 aa7.32□□□□□ -1.24
MCF2-209ENST00000520602 CHCHD7Q9BUK0 85 aa7.32□□□□□ -1.24
MCF2-209ENST00000520602 DNAL4O96015 105 aa7.31□□□□□ -1.24
MCF2-209ENST00000520602 C16orf95Q9H693 158 aa7.31□□□□□ -1.24
MCF2-209ENST00000520602 LINC00694P0DN24 101 aa7.31□□□□□ -1.24
MCF2-209ENST00000520602 C2orf82Q6UX34 121 aa7.31□□□□□ -1.24
MCF2-209ENST00000520602 POM121L12Q8N7R1 296 aa7.31□□□□□ -1.24
MCF2-209ENST00000520602 PTH2Q96A98 100 aa7.31□□□□□ -1.24
MCF2-209ENST00000520602 CR1P17927 2039 aa7.31□□□□□ -1.24
MCF2-209ENST00000520602 FHL3Q13643 280 aa7.31□□□□□ -1.24
MCF2-209ENST00000520602 IGHV3-30P01768 117 aa7.3□□□□□ -1.24
MCF2-209ENST00000520602 CRPP02741 224 aa7.3□□□□□ -1.24
MCF2-209ENST00000520602 IGHV3-30-5P0DP03 117 aa7.3□□□□□ -1.24
MCF2-209ENST00000520602 BEAN1Q3B7T3 259 aa7.3□□□□□ -1.24
MCF2-209ENST00000520602 PIK3CD-AS1Q5SR53 167 aa7.3□□□□□ -1.24
MCF2-209ENST00000520602 SIGMAR1Q99720 223 aa7.3□□□□□ -1.24
MCF2-209ENST00000520602 GCN1Q92616 2671 aaKnown RBP7.3□□□□□ -1.24
MCF2-209ENST00000520602 INSL3P51460 131 aa7.3□□□□□ -1.24
MCF2-209ENST00000520602 MRPS36P82909 103 aaKnown RBP7.3□□□□□ -1.24
MCF2-209ENST00000520602 SLC25A20O43772 301 aa7.29□□□□□ -1.24
MCF2-209ENST00000520602 SNCGO76070 127 aa7.29□□□□□ -1.24
MCF2-209ENST00000520602 CRYBA4P53673 196 aa7.29□□□□□ -1.24
MCF2-209ENST00000520602 PRO0255Q9UI72 69 aa7.29□□□□□ -1.24
MCF2-209ENST00000520602 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.29□□□□□ -1.24
MCF2-209ENST00000520602 FBN2P35556 2912 aa7.29□□□□□ -1.24
MCF2-209ENST00000520602 TRBV6-4A0A1B0GX49 114 aa7.28□□□□□ -1.24
MCF2-209ENST00000520602 UBE2D3P61077 147 aa7.28□□□□□ -1.24
MCF2-209ENST00000520602 UBE2D2P62837 147 aa7.28□□□□□ -1.24
MCF2-209ENST00000520602 SETXQ7Z333 2677 aaKnown RBP7.28□□□□□ -1.24
MCF2-209ENST00000520602 TCL1BO95988 128 aa7.28□□□□□ -1.24
MCF2-209ENST00000520602 DEFB121Q5J5C9 76 aa7.28□□□□□ -1.24
MCF2-209ENST00000520602 SPANXB1Q9NS25 103 aaPredicted RBP7.28□□□□□ -1.24
MCF2-209ENST00000520602 ATP5G1P05496 136 aa7.28□□□□□ -1.24
MCF2-209ENST00000520602 UBE2D1P51668 147 aa7.28□□□□□ -1.24
MCF2-209ENST00000520602 MXRA5Q9NR99 2828 aa7.28□□□□□ -1.24
MCF2-209ENST00000520602 AMELXQ99217 191 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms