RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 PLEKHB2Q96CS7 222 aa18.77■□□□□ 0.6
COL13A1-210ENST00000517713 TINCRA0A1B0GVN0 87 aa18.76■□□□□ 0.59
COL13A1-210ENST00000517713 K7EP13 123 aa18.76■□□□□ 0.59
COL13A1-210ENST00000517713 LINC00694P0DN24 101 aa18.76■□□□□ 0.59
COL13A1-210ENST00000517713 PTTG1IPP53801 180 aa18.76■□□□□ 0.59
COL13A1-210ENST00000517713 SBSPONQ8IVN8 264 aa18.76■□□□□ 0.59
COL13A1-210ENST00000517713 FLNBO75369 2602 aaKnown RBP18.76■□□□□ 0.59
COL13A1-210ENST00000517713 LGALS3P17931 250 aaKnown RBP18.75■□□□□ 0.59
COL13A1-210ENST00000517713 CSDC2Q9Y534 153 aaKnown RBP18.74■□□□□ 0.59
COL13A1-210ENST00000517713 IGHV3-64A0A075B6Q5 118 aa18.73■□□□□ 0.59
COL13A1-210ENST00000517713 UBE2D1P51668 147 aa18.73■□□□□ 0.59
COL13A1-210ENST00000517713 VAMP3Q15836 100 aa18.73■□□□□ 0.59
COL13A1-210ENST00000517713 TMEM243Q9BU79 118 aa18.73■□□□□ 0.59
COL13A1-210ENST00000517713 SMIM13P0DJ93 91 aa18.72■□□□□ 0.59
COL13A1-210ENST00000517713 SMAGPQ0VAQ4 97 aa18.72■□□□□ 0.59
COL13A1-210ENST00000517713 LYRM9A8MSI8 78 aa18.71■□□□□ 0.59
COL13A1-210ENST00000517713 IGHV4-30-4P0DP06 118 aa18.71■□□□□ 0.59
COL13A1-210ENST00000517713 FAM222AQ5U5X8 452 aa18.71■□□□□ 0.59
COL13A1-210ENST00000517713 C9orf118A6NHY6 69 aa18.7■□□□□ 0.58
COL13A1-210ENST00000517713 RAB37Q96AX2 223 aa18.7■□□□□ 0.58
COL13A1-210ENST00000517713 A0A0J9YY99 117 aa18.69■□□□□ 0.58
COL13A1-210ENST00000517713 UBE2L6O14933 153 aa18.69■□□□□ 0.58
COL13A1-210ENST00000517713 GEMIN7Q9H840 131 aaKnown RBP18.69■□□□□ 0.58
COL13A1-210ENST00000517713 UBE2V1Q13404 147 aa18.69■□□□□ 0.58
COL13A1-210ENST00000517713 C3orf56Q8N813 242 aa18.69■□□□□ 0.58
COL13A1-210ENST00000517713 NHP2Q9NX24 153 aaKnown RBP18.69■□□□□ 0.58
COL13A1-210ENST00000517713 IGHV4-28A0A0C4DH34 117 aa18.67■□□□□ 0.58
COL13A1-210ENST00000517713 AMMECR1LQ6DCA0 310 aa18.67■□□□□ 0.58
COL13A1-210ENST00000517713 OR5A1Q8NGJ0 315 aa18.67■□□□□ 0.58
COL13A1-210ENST00000517713 DEFB4AO15263 64 aa18.67■□□□□ 0.58
COL13A1-210ENST00000517713 IGHV3-30-3P0DP02 117 aa18.67■□□□□ 0.58
COL13A1-210ENST00000517713 TIRAPP58753 221 aa18.67■□□□□ 0.58
COL13A1-210ENST00000517713 OXLD1Q5BKU9 147 aa18.67■□□□□ 0.58
COL13A1-210ENST00000517713 H7C423 109 aa18.66■□□□□ 0.58
COL13A1-210ENST00000517713 SRSF9Q13242 221 aaKnown RBP eCLIP18.66■□□□□ 0.58
COL13A1-210ENST00000517713 CDC42SE2Q9NRR3 84 aa18.66■□□□□ 0.58
COL13A1-210ENST00000517713 IGHV1-58A0A0C4DH39 117 aa18.65■□□□□ 0.58
COL13A1-210ENST00000517713 CCL25O15444 150 aa18.65■□□□□ 0.58
COL13A1-210ENST00000517713 TMEM101Q96IK0 257 aa18.65■□□□□ 0.58
COL13A1-210ENST00000517713 TRRAPQ9Y4A5 3859 aa18.65■□□□□ 0.58
COL13A1-210ENST00000517713 TRAV8-3A0A0A6YYJ7 113 aa18.64■□□□□ 0.58
COL13A1-210ENST00000517713 H3BUT2 72 aa18.64■□□□□ 0.58
COL13A1-210ENST00000517713 K7ERJ3 54 aa18.64■□□□□ 0.58
COL13A1-210ENST00000517713 MIFP14174 115 aa18.64■□□□□ 0.58
COL13A1-210ENST00000517713 TRBV6-8A0A0A6YYG3 113 aa18.64■□□□□ 0.57
COL13A1-210ENST00000517713 SHISA2Q6UWI4 295 aa18.64■□□□□ 0.57
COL13A1-210ENST00000517713 RNF183Q96D59 192 aa18.64■□□□□ 0.57
COL13A1-210ENST00000517713 PRO0255Q9UI72 69 aa18.64■□□□□ 0.57
COL13A1-210ENST00000517713 GYPEP15421 78 aa18.63■□□□□ 0.57
COL13A1-210ENST00000517713 Q8NAQ8 132 aa18.63■□□□□ 0.57
COL13A1-210ENST00000517713 SPANXB1Q9NS25 103 aaPredicted RBP18.63■□□□□ 0.57
COL13A1-210ENST00000517713 IGLV5-45A0A087WSX0 123 aa18.62■□□□□ 0.57
COL13A1-210ENST00000517713 SPINK8P0C7L1 97 aa18.62■□□□□ 0.57
COL13A1-210ENST00000517713 FAM19A3Q7Z5A8 133 aa18.62■□□□□ 0.57
COL13A1-210ENST00000517713 CYSRT1A8MQ03 144 aa18.62■□□□□ 0.57
COL13A1-210ENST00000517713 VSIG2Q96IQ7 327 aa18.62■□□□□ 0.57
COL13A1-210ENST00000517713 NAA38Q9BRA0 125 aaKnown RBP18.62■□□□□ 0.57
COL13A1-210ENST00000517713 CDKN2A-AS1Q9UH64 79 aa18.62■□□□□ 0.57
COL13A1-210ENST00000517713 C12orf74Q32Q52 190 aa18.61■□□□□ 0.57
COL13A1-210ENST00000517713 LINC00242Q5T6M2 205 aa18.61■□□□□ 0.57
COL13A1-210ENST00000517713 KRTAP10-11P60412 298 aa18.61■□□□□ 0.57
COL13A1-210ENST00000517713 HERVK_113P63121 156 aa18.61■□□□□ 0.57
COL13A1-210ENST00000517713 COX6A2Q02221 97 aa18.61■□□□□ 0.57
COL13A1-210ENST00000517713 GAGE6Q13070 117 aa18.6■□□□□ 0.57
COL13A1-210ENST00000517713 ATP6V0E2Q8NHE4 81 aa18.6■□□□□ 0.57
COL13A1-210ENST00000517713 TRAV13-1A0A0B4J241 112 aa18.59■□□□□ 0.57
COL13A1-210ENST00000517713 DAD1P61803 113 aa18.59■□□□□ 0.57
COL13A1-210ENST00000517713 PRIMA1Q86XR5 153 aa18.59■□□□□ 0.57
COL13A1-210ENST00000517713 C10orf126Q8N4M7 172 aa18.57■□□□□ 0.56
COL13A1-210ENST00000517713 CHCHD5Q9BSY4 110 aa18.57■□□□□ 0.56
COL13A1-210ENST00000517713 TMEM238LA0A1B0GVL6 79 aa18.57■□□□□ 0.56
COL13A1-210ENST00000517713 A0A1B0GWB2 263 aa18.57■□□□□ 0.56
COL13A1-210ENST00000517713 A6NJY4 79 aa18.57■□□□□ 0.56
COL13A1-210ENST00000517713 PAX4O43316 350 aa18.57■□□□□ 0.56
COL13A1-210ENST00000517713 NBEAL2Q6ZNJ1 2754 aa18.56■□□□□ 0.56
COL13A1-210ENST00000517713 CELA1Q9UNI1 258 aa18.56■□□□□ 0.56
COL13A1-210ENST00000517713 A0A1W2PPM0 123 aa18.56■□□□□ 0.56
COL13A1-210ENST00000517713 IGHV3-30P01768 117 aa18.56■□□□□ 0.56
COL13A1-210ENST00000517713 IGHV3-30-5P0DP03 117 aa18.56■□□□□ 0.56
COL13A1-210ENST00000517713 SAMD5Q5TGI4 173 aa18.56■□□□□ 0.56
COL13A1-210ENST00000517713 A8MZ25 164 aa18.55■□□□□ 0.56
COL13A1-210ENST00000517713 EGFEM1PQ0D2K5 195 aa18.55■□□□□ 0.56
COL13A1-210ENST00000517713 A0A0J9YXY3 114 aa18.54■□□□□ 0.56
COL13A1-210ENST00000517713 NDUFA12Q9UI09 145 aa18.54■□□□□ 0.56
COL13A1-210ENST00000517713 FBN1P35555 2871 aaKnown RBP18.54■□□□□ 0.56
COL13A1-210ENST00000517713 SPART-AS1P0CW21 52 aa18.54■□□□□ 0.56
COL13A1-210ENST00000517713 GAGE10A6NGK3 116 aa18.52■□□□□ 0.56
COL13A1-210ENST00000517713 ZFAND6Q6FIF0 208 aa18.52■□□□□ 0.55
COL13A1-210ENST00000517713 IGLV4-60A0A075B6I1 120 aa18.51■□□□□ 0.55
COL13A1-210ENST00000517713 IGLL5B9A064 214 aa18.51■□□□□ 0.55
COL13A1-210ENST00000517713 TMEM238C9JI98 176 aa18.51■□□□□ 0.55
COL13A1-210ENST00000517713 ATP5G1P05496 136 aa18.51■□□□□ 0.55
COL13A1-210ENST00000517713 FABP2P12104 132 aa18.5■□□□□ 0.55
COL13A1-210ENST00000517713 GTF2H5Q6ZYL4 71 aa18.5■□□□□ 0.55
COL13A1-210ENST00000517713 IGLV5-39A0A0G2JS06 123 aa18.49■□□□□ 0.55
COL13A1-210ENST00000517713 A0A096LPF7 62 aa18.49■□□□□ 0.55
COL13A1-210ENST00000517713 K7EP34 96 aa18.48■□□□□ 0.55
COL13A1-210ENST00000517713 SMIM1B2RUZ4 78 aa18.47■□□□□ 0.55
COL13A1-210ENST00000517713 SPCS1Q9Y6A9 102 aa18.46■□□□□ 0.55
COL13A1-210ENST00000517713 F5H768 121 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms