RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 CALB1P05937 261 aa-5.04□□□□□ -3.22
RNU6-539P-201ENST00000516665 NCALDP61601 193 aa-5.04□□□□□ -3.22
RNU6-539P-201ENST00000516665 DCUN1D2Q6PH85 259 aa-5.04□□□□□ -3.22
RNU6-539P-201ENST00000516665 ZNF818PQ6ZRF7 136 aa-5.04□□□□□ -3.22
RNU6-539P-201ENST00000516665 FDCSPQ8NFU4 85 aa-5.04□□□□□ -3.22
RNU6-539P-201ENST00000516665 RPRMQ9NS64 109 aa-5.04□□□□□ -3.22
RNU6-539P-201ENST00000516665 A0A0G2JMZ2 1700 aa-5.04□□□□□ -3.22
RNU6-539P-201ENST00000516665 DOCK2Q92608 1830 aa-5.04□□□□□ -3.22
RNU6-539P-201ENST00000516665 C9orf84Q5VXU9 1444 aa-5.05□□□□□ -3.22
RNU6-539P-201ENST00000516665 SNAPC4Q5SXM2 1469 aa-5.05□□□□□ -3.22
RNU6-539P-201ENST00000516665 OGFRL1Q5TC84 451 aaPredicted RBP-5.05□□□□□ -3.22
RNU6-539P-201ENST00000516665 NOP16Q9Y3C1 178 aaKnown RBP-5.05□□□□□ -3.22
RNU6-539P-201ENST00000516665 H0YIV9 168 aa-5.06□□□□□ -3.22
RNU6-539P-201ENST00000516665 APOC3P02656 99 aa-5.06□□□□□ -3.22
RNU6-539P-201ENST00000516665 MGPP08493 103 aa-5.06□□□□□ -3.22
RNU6-539P-201ENST00000516665 LSM3P62310 102 aaKnown RBP-5.06□□□□□ -3.22
RNU6-539P-201ENST00000516665 TRAV13-1A0A0B4J241 112 aa-5.07□□□□□ -3.22
RNU6-539P-201ENST00000516665 RIIAD1A6NNX1 92 aa-5.07□□□□□ -3.22
RNU6-539P-201ENST00000516665 Q6ZUT4 128 aa-5.07□□□□□ -3.22
RNU6-539P-201ENST00000516665 LCN9Q8WX39 176 aa-5.07□□□□□ -3.22
RNU6-539P-201ENST00000516665 PAIP2Q9BPZ3 127 aaKnown RBP-5.07□□□□□ -3.22
RNU6-539P-201ENST00000516665 H3BMG7 143 aa-5.08□□□□□ -3.22
RNU6-539P-201ENST00000516665 TPPP2P59282 170 aa-5.08□□□□□ -3.22
RNU6-539P-201ENST00000516665 SCGB2B2Q4G0G5 96 aa-5.08□□□□□ -3.22
RNU6-539P-201ENST00000516665 LINC00305Q7Z4B0 112 aa-5.08□□□□□ -3.22
RNU6-539P-201ENST00000516665 ATP6V0E2Q8NHE4 81 aa-5.08□□□□□ -3.22
RNU6-539P-201ENST00000516665 SLC35B3Q9H1N7 401 aa-5.08□□□□□ -3.22
RNU6-539P-201ENST00000516665 QRICH2Q9H0J4 1663 aa-5.08□□□□□ -3.22
RNU6-539P-201ENST00000516665 WDFY3Q8IZQ1 3526 aa-5.09□□□□□ -3.22
RNU6-539P-201ENST00000516665 SDC2P34741 201 aa-5.09□□□□□ -3.22
RNU6-539P-201ENST00000516665 BTF3L4Q96K17 158 aa-5.09□□□□□ -3.22
RNU6-539P-201ENST00000516665 GINS3Q9BRX5 216 aa-5.09□□□□□ -3.22
RNU6-539P-201ENST00000516665 LINC01558Q9Y6Z2 57 aa-5.09□□□□□ -3.22
RNU6-539P-201ENST00000516665 RIMS1Q86UR5 1692 aaKnown RBP-5.09□□□□□ -3.22
RNU6-539P-201ENST00000516665 CEP350Q5VT06 3117 aa-5.1□□□□□ -3.23
RNU6-539P-201ENST00000516665 UHRF1BP1LA0JNW5 1464 aa-5.1□□□□□ -3.23
RNU6-539P-201ENST00000516665 LINC01545Q5VT33 79 aa-5.1□□□□□ -3.23
RNU6-539P-201ENST00000516665 ARL6IP6Q8N6S5 226 aa-5.1□□□□□ -3.23
RNU6-539P-201ENST00000516665 IMP3Q9NV31 184 aaKnown RBP-5.1□□□□□ -3.23
RNU6-539P-201ENST00000516665 FAM223BA6NKX1 122 aa-5.11□□□□□ -3.23
RNU6-539P-201ENST00000516665 IQCF5A8MTL0 148 aa-5.11□□□□□ -3.23
RNU6-539P-201ENST00000516665 TMEM114B3SHH9 223 aa-5.11□□□□□ -3.23
RNU6-539P-201ENST00000516665 GABARAPH6UMI1 98 aa-5.11□□□□□ -3.23
RNU6-539P-201ENST00000516665 NDUFC2O95298 119 aa-5.11□□□□□ -3.23
RNU6-539P-201ENST00000516665 IFNA17P01571 189 aa-5.11□□□□□ -3.23
RNU6-539P-201ENST00000516665 SLC25A5P05141 298 aaKnown RBP-5.11□□□□□ -3.23
RNU6-539P-201ENST00000516665 TNP1P09430 55 aa-5.11□□□□□ -3.23
RNU6-539P-201ENST00000516665 UBE2G1P62253 170 aa-5.11□□□□□ -3.23
RNU6-539P-201ENST00000516665 GPATCH11Q8N954 259 aa-5.11□□□□□ -3.23
RNU6-539P-201ENST00000516665 IGLC7A0M8Q6 106 aa-5.12□□□□□ -3.23
RNU6-539P-201ENST00000516665 PTMAP06454 111 aaKnown RBP-5.12□□□□□ -3.23
RNU6-539P-201ENST00000516665 SRP9P49458 86 aaKnown RBP-5.12□□□□□ -3.23
RNU6-539P-201ENST00000516665 B2MP61769 119 aa-5.12□□□□□ -3.23
RNU6-539P-201ENST00000516665 SPTSSBQ8NFR3 76 aa-5.12□□□□□ -3.23
RNU6-539P-201ENST00000516665 UBE2D4Q9Y2X8 147 aa-5.12□□□□□ -3.23
RNU6-539P-201ENST00000516665 SCN11AQ9UI33 1791 aa-5.12□□□□□ -3.23
RNU6-539P-201ENST00000516665 CCDC144AA2RUR9 1427 aa-5.13□□□□□ -3.23
RNU6-539P-201ENST00000516665 CLIP1P30622 1438 aa-5.13□□□□□ -3.23
RNU6-539P-201ENST00000516665 C4AP0C0L4 1744 aa-5.13□□□□□ -3.23
RNU6-539P-201ENST00000516665 C4BP0C0L5 1744 aa-5.13□□□□□ -3.23
RNU6-539P-201ENST00000516665 XRN1Q8IZH2 1706 aaKnown RBP-5.13□□□□□ -3.23
RNU6-539P-201ENST00000516665 LOC100130705A0A1B0GUX0 176 aa-5.13□□□□□ -3.23
RNU6-539P-201ENST00000516665 J3QLW9 94 aa-5.13□□□□□ -3.23
RNU6-539P-201ENST00000516665 M0QZK8 103 aa-5.13□□□□□ -3.23
RNU6-539P-201ENST00000516665 UQCRQO14949 82 aa-5.13□□□□□ -3.23
RNU6-539P-201ENST00000516665 APOA2P02652 100 aa-5.13□□□□□ -3.23
RNU6-539P-201ENST00000516665 SKP1P63208 163 aa-5.13□□□□□ -3.23
RNU6-539P-201ENST00000516665 PTH2Q96A98 100 aa-5.13□□□□□ -3.23
RNU6-539P-201ENST00000516665 C7orf50Q9BRJ6 194 aaKnown RBP-5.13□□□□□ -3.23
RNU6-539P-201ENST00000516665 LENEPQ9Y5L5 61 aa-5.13□□□□□ -3.23
RNU6-539P-201ENST00000516665 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-5.14□□□□□ -3.23
RNU6-539P-201ENST00000516665 HSD11B1P28845 292 aa-5.14□□□□□ -3.23
RNU6-539P-201ENST00000516665 LCN6P62502 163 aa-5.14□□□□□ -3.23
RNU6-539P-201ENST00000516665 GNG5P63218 68 aa-5.14□□□□□ -3.23
RNU6-539P-201ENST00000516665 NUP35Q8NFH5 326 aa-5.14□□□□□ -3.23
RNU6-539P-201ENST00000516665 ABCC10Q5T3U5 1492 aa-5.14□□□□□ -3.23
RNU6-539P-201ENST00000516665 TIAM2Q8IVF5 1701 aa-5.14□□□□□ -3.23
RNU6-539P-201ENST00000516665 ANKRD36A6QL64 1941 aa-5.15□□□□□ -3.23
RNU6-539P-201ENST00000516665 TRDV1A0A1B0GX56 115 aa-5.15□□□□□ -3.23
RNU6-539P-201ENST00000516665 TMEM238C9JI98 176 aa-5.15□□□□□ -3.23
RNU6-539P-201ENST00000516665 NWD2Q9ULI1 1742 aa-5.15□□□□□ -3.23
RNU6-539P-201ENST00000516665 PSME4Q14997 1843 aa-5.16□□□□□ -3.23
RNU6-539P-201ENST00000516665 S100A6P06703 90 aa-5.16□□□□□ -3.24
RNU6-539P-201ENST00000516665 UBA52P62987 128 aaKnown RBP-5.16□□□□□ -3.24
RNU6-539P-201ENST00000516665 SEC11AP67812 179 aa-5.16□□□□□ -3.24
RNU6-539P-201ENST00000516665 RPL7L1Q6DKI1 246 aaKnown RBP-5.16□□□□□ -3.24
RNU6-539P-201ENST00000516665 PP6455Q8WZ26 134 aa-5.16□□□□□ -3.24
RNU6-539P-201ENST00000516665 FAM167A-AS1Q96KT0 104 aa-5.16□□□□□ -3.24
RNU6-539P-201ENST00000516665 C1orf167Q5SNV9 1468 aa-5.16□□□□□ -3.24
RNU6-539P-201ENST00000516665 RGPD2P0DJD1 1756 aa-5.16□□□□□ -3.24
RNU6-539P-201ENST00000516665 DCHS1Q96JQ0 3298 aa-5.17□□□□□ -3.24
RNU6-539P-201ENST00000516665 CSN2P05814 226 aa-5.17□□□□□ -3.24
RNU6-539P-201ENST00000516665 HIST1H1BP16401 226 aaKnown RBP-5.17□□□□□ -3.24
RNU6-539P-201ENST00000516665 RPL7P18124 248 aaKnown RBP-5.17□□□□□ -3.24
RNU6-539P-201ENST00000516665 HSPE1P61604 102 aaKnown RBP-5.17□□□□□ -3.24
RNU6-539P-201ENST00000516665 TPT1P8Q9HAU6 139 aa-5.17□□□□□ -3.24
RNU6-539P-201ENST00000516665 CBLN4Q9NTU7 201 aa-5.17□□□□□ -3.24
RNU6-539P-201ENST00000516665 A6NIN4 97 aa-5.18□□□□□ -3.24
RNU6-539P-201ENST00000516665 H7C1C5 153 aa-5.18□□□□□ -3.24
RNU6-539P-201ENST00000516665 CCL8P80075 99 aa-5.18□□□□□ -3.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms