RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-222ENST00000515609 NTM-AS1Q6ZSK4 140 aa6.63□□□□□ -1.35
TPM3-222ENST00000515609 Q6ZTC4 211 aa6.63□□□□□ -1.35
TPM3-222ENST00000515609 NFE4Q86UQ8 179 aa6.63□□□□□ -1.35
TPM3-222ENST00000515609 ATOH7Q8N100 152 aa6.63□□□□□ -1.35
TPM3-222ENST00000515609 ZNF664Q8N3J9 261 aa6.63□□□□□ -1.35
TPM3-222ENST00000515609 GEMIN7Q9H840 131 aaKnown RBP6.63□□□□□ -1.35
TPM3-222ENST00000515609 C11orf86A6NJI1 115 aa6.62□□□□□ -1.35
TPM3-222ENST00000515609 TMEM262E9PQX1 116 aa6.62□□□□□ -1.35
TPM3-222ENST00000515609 HERVK_113P63121 156 aa6.62□□□□□ -1.35
TPM3-222ENST00000515609 DEFB104AQ8WTQ1 72 aa6.62□□□□□ -1.35
TPM3-222ENST00000515609 MIEN1Q9BRT3 115 aa6.62□□□□□ -1.35
TPM3-222ENST00000515609 TINCRA0A1B0GVN0 87 aa6.61□□□□□ -1.35
TPM3-222ENST00000515609 IGLC3P0DOY3 106 aa6.61□□□□□ -1.35
TPM3-222ENST00000515609 TMEM170BQ5T4T1 132 aa6.61□□□□□ -1.35
TPM3-222ENST00000515609 ZC2HC1BQ5TFG8 222 aa6.61□□□□□ -1.35
TPM3-222ENST00000515609 SLC25A34Q6PIV7 304 aa6.61□□□□□ -1.35
TPM3-222ENST00000515609 CHAC1Q9BUX1 264 aa6.61□□□□□ -1.35
TPM3-222ENST00000515609 CDC42SE2Q9NRR3 84 aa6.61□□□□□ -1.35
TPM3-222ENST00000515609 A0A096LPF7 62 aa6.6□□□□□ -1.35
TPM3-222ENST00000515609 PCP4L1A6NKN8 68 aa6.6□□□□□ -1.35
TPM3-222ENST00000515609 DLEU1O43261 78 aa6.6□□□□□ -1.35
TPM3-222ENST00000515609 DDTP30046 118 aa6.6□□□□□ -1.35
TPM3-222ENST00000515609 NANOS2P60321 138 aaKnown RBP6.6□□□□□ -1.35
TPM3-222ENST00000515609 GAGE6Q13070 117 aa6.6□□□□□ -1.35
TPM3-222ENST00000515609 hDV102S1A0JD36 115 aa6.59□□□□□ -1.35
TPM3-222ENST00000515609 COX8AP10176 69 aa6.59□□□□□ -1.35
TPM3-222ENST00000515609 SS18Q15532 418 aa6.59□□□□□ -1.35
TPM3-222ENST00000515609 CDPF1Q6NVV7 123 aa6.59□□□□□ -1.35
TPM3-222ENST00000515609 Q6ZUT4 128 aa6.59□□□□□ -1.35
TPM3-222ENST00000515609 FAM19A3Q7Z5A8 133 aa6.59□□□□□ -1.35
TPM3-222ENST00000515609 PLEKHB2Q96CS7 222 aa6.59□□□□□ -1.35
TPM3-222ENST00000515609 PRO1933Q9H354 126 aa6.59□□□□□ -1.35
TPM3-222ENST00000515609 PKD1L1Q8TDX9 2849 aa6.59□□□□□ -1.35
TPM3-222ENST00000515609 IGLV4-69A0A075B6H9 119 aa6.58□□□□□ -1.36
TPM3-222ENST00000515609 E9PLD3 99 aa6.58□□□□□ -1.36
TPM3-222ENST00000515609 SIVA1O15304 175 aa6.58□□□□□ -1.36
TPM3-222ENST00000515609 NMUP48645 174 aa6.58□□□□□ -1.36
TPM3-222ENST00000515609 UBE2D1P51668 147 aa6.58□□□□□ -1.36
TPM3-222ENST00000515609 HNRNPA3P51991 378 aaKnown RBP6.58□□□□□ -1.36
TPM3-222ENST00000515609 TCTAP57738 103 aa6.58□□□□□ -1.36
TPM3-222ENST00000515609 DEFA6Q01524 100 aa6.58□□□□□ -1.36
TPM3-222ENST00000515609 CEMP1Q6PRD7 247 aaPredicted RBP6.58□□□□□ -1.36
TPM3-222ENST00000515609 LYPD5Q6UWN5 251 aa6.58□□□□□ -1.36
TPM3-222ENST00000515609 STPG4Q8N801 248 aa6.58□□□□□ -1.36
TPM3-222ENST00000515609 OPRPNQ99935 248 aaPredicted RBP6.58□□□□□ -1.36
TPM3-222ENST00000515609 MGAM2Q2M2H8 2515 aa6.58□□□□□ -1.36
TPM3-222ENST00000515609 A0A0J9YXV3 536 aa6.57□□□□□ -1.36
TPM3-222ENST00000515609 CCL18P55774 89 aa6.57□□□□□ -1.36
TPM3-222ENST00000515609 RBX1P62877 108 aa6.57□□□□□ -1.36
TPM3-222ENST00000515609 BOD1L2Q8IYS8 172 aa6.57□□□□□ -1.36
TPM3-222ENST00000515609 LINC00469Q8N7U9 141 aa6.57□□□□□ -1.36
TPM3-222ENST00000515609 KLK5Q9Y337 293 aaPredicted RBP6.57□□□□□ -1.36
TPM3-222ENST00000515609 MRPS16Q9Y3D3 137 aaKnown RBP6.57□□□□□ -1.36
TPM3-222ENST00000515609 TRAV13-1A0A0B4J241 112 aa6.56□□□□□ -1.36
TPM3-222ENST00000515609 NUPR2A6NF83 97 aa6.56□□□□□ -1.36
TPM3-222ENST00000515609 K7EP13 123 aa6.56□□□□□ -1.36
TPM3-222ENST00000515609 LGALS3P17931 250 aaKnown RBP6.56□□□□□ -1.36
TPM3-222ENST00000515609 SFTA2Q6UW10 78 aa6.56□□□□□ -1.36
TPM3-222ENST00000515609 C14orf144Q96I85 54 aa6.56□□□□□ -1.36
TPM3-222ENST00000515609 NBEAL2Q6ZNJ1 2754 aa6.56□□□□□ -1.36
TPM3-222ENST00000515609 NOTCH1P46531 2555 aa6.56□□□□□ -1.36
TPM3-222ENST00000515609 IGLV5-45A0A087WSX0 123 aa6.55□□□□□ -1.36
TPM3-222ENST00000515609 TRAV8-4A0A0B4J246 113 aa6.55□□□□□ -1.36
TPM3-222ENST00000515609 TMEM223A0PJW6 202 aa6.55□□□□□ -1.36
TPM3-222ENST00000515609 LEPROTO15243 131 aa6.55□□□□□ -1.36
TPM3-222ENST00000515609 CRPP02741 224 aa6.55□□□□□ -1.36
TPM3-222ENST00000515609 ANGP03950 147 aaKnown RBP6.55□□□□□ -1.36
TPM3-222ENST00000515609 GCSHP23434 173 aa6.55□□□□□ -1.36
TPM3-222ENST00000515609 MAJINQ3KP22 176 aa6.55□□□□□ -1.36
TPM3-222ENST00000515609 J3QQQ9 107 aa6.54□□□□□ -1.36
TPM3-222ENST00000515609 M0R143 59 aa6.54□□□□□ -1.36
TPM3-222ENST00000515609 ZNF22P17026 224 aaPredicted RBP6.54□□□□□ -1.36
TPM3-222ENST00000515609 LBHQ53QV2 105 aaPredicted RBP6.54□□□□□ -1.36
TPM3-222ENST00000515609 ANKRD39Q53RE8 183 aa6.54□□□□□ -1.36
TPM3-222ENST00000515609 MPV17L2Q567V2 206 aa6.54□□□□□ -1.36
TPM3-222ENST00000515609 LINC00242Q5T6M2 205 aa6.54□□□□□ -1.36
TPM3-222ENST00000515609 LINC01561Q8N1V8 128 aa6.54□□□□□ -1.36
TPM3-222ENST00000515609 TRRAPQ9Y4A5 3859 aa6.53□□□□□ -1.36
TPM3-222ENST00000515609 IGLV4-60A0A075B6I1 120 aa6.53□□□□□ -1.36
TPM3-222ENST00000515609 IGHV1-58A0A0C4DH39 117 aa6.53□□□□□ -1.36
TPM3-222ENST00000515609 MYMXA0A1B0GTQ4 84 aa6.53□□□□□ -1.36
TPM3-222ENST00000515609 LINC00959A0A1B0GUT2 108 aa6.53□□□□□ -1.36
TPM3-222ENST00000515609 IGLL5B9A064 214 aa6.53□□□□□ -1.36
TPM3-222ENST00000515609 REG3AQ06141 175 aa6.53□□□□□ -1.36
TPM3-222ENST00000515609 RNASE13Q5GAN3 156 aaKnown RBP6.53□□□□□ -1.36
TPM3-222ENST00000515609 SCGB1D4Q6XE38 83 aa6.53□□□□□ -1.36
TPM3-222ENST00000515609 FAM104AQ969W3 186 aa6.53□□□□□ -1.36
TPM3-222ENST00000515609 HIGD1BQ9P298 99 aa6.53□□□□□ -1.36
TPM3-222ENST00000515609 NBEAL1Q6ZS30 2694 aa6.53□□□□□ -1.36
TPM3-222ENST00000515609 ZNF815PA8K554 130 aa6.52□□□□□ -1.37
TPM3-222ENST00000515609 LINC00587B1AMM8 73 aa6.52□□□□□ -1.37
TPM3-222ENST00000515609 APOMO95445 188 aa6.52□□□□□ -1.37
TPM3-222ENST00000515609 MIAQ16674 131 aa6.52□□□□□ -1.37
TPM3-222ENST00000515609 LINC01556Q5JQF7 62 aa6.52□□□□□ -1.37
TPM3-222ENST00000515609 LINC00269Q8N2A0 174 aa6.52□□□□□ -1.37
TPM3-222ENST00000515609 C10orf126Q8N4M7 172 aa6.52□□□□□ -1.37
TPM3-222ENST00000515609 COPS9Q8WXC6 57 aa6.52□□□□□ -1.37
TPM3-222ENST00000515609 HERV-K104P63124 156 aa6.51□□□□□ -1.37
TPM3-222ENST00000515609 CIRBPQ14011 172 aaKnown RBP6.51□□□□□ -1.37
TPM3-222ENST00000515609 TAL2Q16559 108 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms