RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 COL5A1P20908 1838 aaPredicted RBP9.79□□□□□ -0.84
TCOF1-213ENST00000514442 Q8N6K4 173 aa9.79□□□□□ -0.84
TCOF1-213ENST00000514442 A0A1W2PPR1 153 aa9.78□□□□□ -0.84
TCOF1-213ENST00000514442 IGHV4-4A0A075B6R2 117 aa9.78□□□□□ -0.84
TCOF1-213ENST00000514442 HRCT1Q6UXD1 115 aa9.78□□□□□ -0.84
TCOF1-213ENST00000514442 SND1-IT1Q9HBX3 110 aa9.78□□□□□ -0.84
TCOF1-213ENST00000514442 SPTBN4Q9H254 2564 aa9.77□□□□□ -0.84
TCOF1-213ENST00000514442 LINC01546A6NGU7 62 aa9.77□□□□□ -0.84
TCOF1-213ENST00000514442 K7EQG2 157 aa9.77□□□□□ -0.84
TCOF1-213ENST00000514442 IGLV2-18A0A075B6J9 118 aa9.77□□□□□ -0.85
TCOF1-213ENST00000514442 KRTAP10-9P60411 292 aa9.77□□□□□ -0.85
TCOF1-213ENST00000514442 MYO9AB2RTY4 2548 aa9.77□□□□□ -0.85
TCOF1-213ENST00000514442 CHD8Q9HCK8 2581 aa9.77□□□□□ -0.85
TCOF1-213ENST00000514442 AVPP01185 164 aa9.77□□□□□ -0.85
TCOF1-213ENST00000514442 CEMP1Q6PRD7 247 aaPredicted RBP9.77□□□□□ -0.85
TCOF1-213ENST00000514442 VSIG2Q96IQ7 327 aa9.77□□□□□ -0.85
TCOF1-213ENST00000514442 DSCR8Q96T75 97 aa9.77□□□□□ -0.85
TCOF1-213ENST00000514442 PKIGQ9Y2B9 76 aa9.77□□□□□ -0.85
TCOF1-213ENST00000514442 PCNTO95613 3336 aa9.77□□□□□ -0.85
TCOF1-213ENST00000514442 DEFB114Q30KQ6 69 aa9.76□□□□□ -0.85
TCOF1-213ENST00000514442 C18orf65Q6ZTR6 163 aa9.76□□□□□ -0.85
TCOF1-213ENST00000514442 C20orf197Q8N268 126 aa9.76□□□□□ -0.85
TCOF1-213ENST00000514442 C11orf21Q9P2W6 132 aa9.76□□□□□ -0.85
TCOF1-213ENST00000514442 DSCAML1Q8TD84 2053 aa9.76□□□□□ -0.85
TCOF1-213ENST00000514442 F8WEM9 126 aa9.76□□□□□ -0.85
TCOF1-213ENST00000514442 TRAV23DV6A0A075B6W5 121 aa9.76□□□□□ -0.85
TCOF1-213ENST00000514442 TRBV7-7A0A0K0K1E9 115 aa9.75□□□□□ -0.85
TCOF1-213ENST00000514442 JMJD7-PLA2G4BH0Y9G9 81 aa9.75□□□□□ -0.85
TCOF1-213ENST00000514442 LECT2O14960 151 aa9.75□□□□□ -0.85
TCOF1-213ENST00000514442 Q6ZTI0 123 aa9.75□□□□□ -0.85
TCOF1-213ENST00000514442 ODF3Q96PU9 254 aa9.75□□□□□ -0.85
TCOF1-213ENST00000514442 ZNF702PQ9H963 129 aa9.75□□□□□ -0.85
TCOF1-213ENST00000514442 V9GYY9 64 aa9.75□□□□□ -0.85
TCOF1-213ENST00000514442 KLK5Q9Y337 293 aaPredicted RBP9.75□□□□□ -0.85
TCOF1-213ENST00000514442 COX8CQ7Z4L0 72 aa9.74□□□□□ -0.85
TCOF1-213ENST00000514442 RMI2Q96E14 147 aa9.74□□□□□ -0.85
TCOF1-213ENST00000514442 IGLV4-69A0A075B6H9 119 aa9.74□□□□□ -0.85
TCOF1-213ENST00000514442 IGLV4-3A0A075B6K6 122 aa9.74□□□□□ -0.85
TCOF1-213ENST00000514442 USP17L23D6RBM5 183 aa9.74□□□□□ -0.85
TCOF1-213ENST00000514442 LY6G6DO95868 133 aa9.74□□□□□ -0.85
TCOF1-213ENST00000514442 SBSPONQ8IVN8 264 aa9.73□□□□□ -0.85
TCOF1-213ENST00000514442 TIRAPP58753 221 aa9.73□□□□□ -0.85
TCOF1-213ENST00000514442 TSPEAR-AS2P59090 65 aa9.73□□□□□ -0.85
TCOF1-213ENST00000514442 SORL1Q92673 2214 aa9.73□□□□□ -0.85
TCOF1-213ENST00000514442 F8W735 103 aaPredicted RBP9.72□□□□□ -0.85
TCOF1-213ENST00000514442 LINC00308Q8TCZ7 52 aa9.72□□□□□ -0.85
TCOF1-213ENST00000514442 ATP5EP2Q5VTU8 51 aa9.72□□□□□ -0.85
TCOF1-213ENST00000514442 BPTFQ12830 3046 aa9.72□□□□□ -0.85
TCOF1-213ENST00000514442 IGIPA6NJ69 53 aa9.72□□□□□ -0.85
TCOF1-213ENST00000514442 LINC00482Q8N8I6 264 aa9.72□□□□□ -0.85
TCOF1-213ENST00000514442 TIMM17BO60830 172 aa9.71□□□□□ -0.85
TCOF1-213ENST00000514442 TRBV27A0A0K0K1C4 114 aa9.71□□□□□ -0.85
TCOF1-213ENST00000514442 ZFAND2AQ8N6M9 145 aa9.71□□□□□ -0.85
TCOF1-213ENST00000514442 EXPH5Q8NEV8 1989 aa9.71□□□□□ -0.86
TCOF1-213ENST00000514442 UPK3BQ9BT76 320 aa9.71□□□□□ -0.86
TCOF1-213ENST00000514442 PSMG3-AS1Q96PY0 264 aa9.7□□□□□ -0.86
TCOF1-213ENST00000514442 C2CD3Q4AC94 2353 aa9.7□□□□□ -0.86
TCOF1-213ENST00000514442 TLN2Q9Y4G6 2542 aa9.7□□□□□ -0.86
TCOF1-213ENST00000514442 NDUFC2-KCTD14E9PQ53 114 aa9.7□□□□□ -0.86
TCOF1-213ENST00000514442 COX7B2Q8TF08 81 aa9.7□□□□□ -0.86
TCOF1-213ENST00000514442 CAMK2N2Q96S95 79 aa9.7□□□□□ -0.86
TCOF1-213ENST00000514442 PLA2G2AP14555 144 aa9.7□□□□□ -0.86
TCOF1-213ENST00000514442 CCL18P55774 89 aa9.69□□□□□ -0.86
TCOF1-213ENST00000514442 Q6JHZ5 121 aa9.69□□□□□ -0.86
TCOF1-213ENST00000514442 SMR3AQ99954 134 aa9.69□□□□□ -0.86
TCOF1-213ENST00000514442 NDUFA1O15239 70 aa9.69□□□□□ -0.86
TCOF1-213ENST00000514442 POLR2KP53803 58 aaKnown RBP9.69□□□□□ -0.86
TCOF1-213ENST00000514442 KLK12Q9UKR0 248 aa9.69□□□□□ -0.86
TCOF1-213ENST00000514442 TRBV6-5A0A0K0K1A5 114 aa9.69□□□□□ -0.86
TCOF1-213ENST00000514442 LINC01006Q8NI28 216 aa9.69□□□□□ -0.86
TCOF1-213ENST00000514442 A0A0U1RQV1 116 aa9.69□□□□□ -0.86
TCOF1-213ENST00000514442 PRR9Q5T870 116 aa9.69□□□□□ -0.86
TCOF1-213ENST00000514442 WFDC10AQ9H1F0 79 aa9.69□□□□□ -0.86
TCOF1-213ENST00000514442 EDN2P20800 178 aa9.68□□□□□ -0.86
TCOF1-213ENST00000514442 FHL3Q13643 280 aa9.68□□□□□ -0.86
TCOF1-213ENST00000514442 PRO0255Q9UI72 69 aa9.68□□□□□ -0.86
TCOF1-213ENST00000514442 PRM2P04554 102 aa9.68□□□□□ -0.86
TCOF1-213ENST00000514442 COL4A2P08572 1712 aa9.68□□□□□ -0.86
TCOF1-213ENST00000514442 RAI1Q7Z5J4 1906 aaPredicted RBP9.68□□□□□ -0.86
TCOF1-213ENST00000514442 PROK1P58294 105 aa9.67□□□□□ -0.86
TCOF1-213ENST00000514442 FAM222AQ5U5X8 452 aa9.67□□□□□ -0.86
TCOF1-213ENST00000514442 MIR7-3HGQ8N6C7 128 aa9.67□□□□□ -0.86
TCOF1-213ENST00000514442 M0QY20 66 aa9.67□□□□□ -0.86
TCOF1-213ENST00000514442 IGLV1-40P01703 118 aa9.67□□□□□ -0.86
TCOF1-213ENST00000514442 ENHOQ6UWT2 76 aa9.67□□□□□ -0.86
TCOF1-213ENST00000514442 TMEM256-PLSCR3K7ERE1 68 aa9.67□□□□□ -0.86
TCOF1-213ENST00000514442 NHLRC4P0CG21 123 aaPredicted RBP9.66□□□□□ -0.86
TCOF1-213ENST00000514442 PYGO1Q9Y3Y4 419 aa9.66□□□□□ -0.86
TCOF1-213ENST00000514442 RPS28P62857 69 aaKnown RBP9.66□□□□□ -0.86
TCOF1-213ENST00000514442 CDKN2A-AS1Q9UH64 79 aa9.66□□□□□ -0.86
TCOF1-213ENST00000514442 RNASE3P12724 160 aaKnown RBP9.65□□□□□ -0.86
TCOF1-213ENST00000514442 UBE2BP63146 152 aa9.65□□□□□ -0.86
TCOF1-213ENST00000514442 USP9XQ93008 2570 aaPredicted RBP9.65□□□□□ -0.86
TCOF1-213ENST00000514442 NCR3O14931 201 aa9.65□□□□□ -0.86
TCOF1-213ENST00000514442 A8MZ25 164 aa9.65□□□□□ -0.87
TCOF1-213ENST00000514442 TSHBP01222 138 aa9.65□□□□□ -0.87
TCOF1-213ENST00000514442 C1orf195Q5TG92 126 aa9.64□□□□□ -0.87
TCOF1-213ENST00000514442 DEFB105AQ8NG35 78 aa9.64□□□□□ -0.87
TCOF1-213ENST00000514442 JMJD1CQ15652 2540 aa9.64□□□□□ -0.87
TCOF1-213ENST00000514442 TRBV10-1A0A0K0K1A3 114 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms