RNA–Protein interactions for RNA: ENST00000514133.1

SGCB-203, Transcript of sarcoglycan beta, humanhuman

TSL 5

Gene SGCB, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-203ENST00000514133 PCNX1Q96RV3 2341 aa1.11□□□□□ -2.23
SGCB-203ENST00000514133 ABCC10Q5T3U5 1492 aa1.11□□□□□ -2.23
SGCB-203ENST00000514133 RYR1P21817 5038 aa1.11□□□□□ -2.23
SGCB-203ENST00000514133 ITPR1Q14643 2758 aa1.1□□□□□ -2.23
SGCB-203ENST00000514133 FAM24AA6NFZ4 105 aa1.1□□□□□ -2.23
SGCB-203ENST00000514133 C5orf38Q86SI9 138 aa1.1□□□□□ -2.23
SGCB-203ENST00000514133 TTC9CQ8N5M4 171 aa1.1□□□□□ -2.23
SGCB-203ENST00000514133 DOCK11Q5JSL3 2073 aa1.1□□□□□ -2.23
SGCB-203ENST00000514133 USP34Q70CQ2 3546 aa1.1□□□□□ -2.23
SGCB-203ENST00000514133 ALKQ9UM73 1620 aa1.1□□□□□ -2.23
SGCB-203ENST00000514133 PI4KAP42356 2102 aa1.1□□□□□ -2.23
SGCB-203ENST00000514133 EP400Q96L91 3159 aa1.1□□□□□ -2.23
SGCB-203ENST00000514133 NBEAL1Q6ZS30 2694 aa1.1□□□□□ -2.23
SGCB-203ENST00000514133 NSD1Q96L73 2696 aaPredicted RBP1.1□□□□□ -2.23
SGCB-203ENST00000514133 UTP20O75691 2785 aaKnown RBP1.09□□□□□ -2.23
SGCB-203ENST00000514133 CEP295Q9C0D2 2601 aa1.09□□□□□ -2.23
SGCB-203ENST00000514133 PKD1L1Q8TDX9 2849 aa1.09□□□□□ -2.23
SGCB-203ENST00000514133 SPTAN1Q13813 2472 aaKnown RBP1.09□□□□□ -2.23
SGCB-203ENST00000514133 PPIP5K1Q6PFW1 1433 aa1.09□□□□□ -2.23
SGCB-203ENST00000514133 SHROOM2Q13796 1616 aa1.09□□□□□ -2.23
SGCB-203ENST00000514133 MADDQ8WXG6 1647 aa1.09□□□□□ -2.23
SGCB-203ENST00000514133 BOD1L1Q8NFC6 3051 aa1.09□□□□□ -2.23
SGCB-203ENST00000514133 SPEGQ15772 3267 aa1.09□□□□□ -2.23
SGCB-203ENST00000514133 A0A096LNT2 108 aa1.09□□□□□ -2.23
SGCB-203ENST00000514133 IFITM1P13164 125 aa1.09□□□□□ -2.23
SGCB-203ENST00000514133 ACYP2P14621 99 aa1.09□□□□□ -2.23
SGCB-203ENST00000514133 C14orf144Q96I85 54 aa1.09□□□□□ -2.23
SGCB-203ENST00000514133 Q96NJ1 140 aa1.09□□□□□ -2.23
SGCB-203ENST00000514133 FANCD2Q9BXW9 1451 aa1.09□□□□□ -2.24
SGCB-203ENST00000514133 MUC3AQ02505 3323 aa1.09□□□□□ -2.24
SGCB-203ENST00000514133 ACACBO00763 2458 aa1.09□□□□□ -2.24
SGCB-203ENST00000514133 TLN1Q9Y490 2541 aaKnown RBP1.09□□□□□ -2.24
SGCB-203ENST00000514133 ZANQ9Y493 2812 aa1.08□□□□□ -2.24
SGCB-203ENST00000514133 TARBP1Q13395 1621 aaKnown RBP1.08□□□□□ -2.24
SGCB-203ENST00000514133 RALGAPBQ86X10 1494 aa1.08□□□□□ -2.24
SGCB-203ENST00000514133 COMMD6Q7Z4G1 85 aa1.08□□□□□ -2.24
SGCB-203ENST00000514133 HYDINQ4G0P3 5121 aa1.08□□□□□ -2.24
SGCB-203ENST00000514133 BRCA2P51587 3418 aa1.08□□□□□ -2.24
SGCB-203ENST00000514133 IFT172Q9UG01 1749 aa1.08□□□□□ -2.24
SGCB-203ENST00000514133 REV3LO60673 3130 aa1.08□□□□□ -2.24
SGCB-203ENST00000514133 PIEZO2Q9H5I5 2752 aa1.08□□□□□ -2.24
SGCB-203ENST00000514133 GOLGB1Q14789 3259 aaKnown RBP1.07□□□□□ -2.24
SGCB-203ENST00000514133 FLNAP21333 2647 aaKnown RBP1.07□□□□□ -2.24
SGCB-203ENST00000514133 TET3O43151 1660 aa1.07□□□□□ -2.24
SGCB-203ENST00000514133 WIZO95785 1651 aa1.07□□□□□ -2.24
SGCB-203ENST00000514133 C5orf42Q9H799 3197 aa1.07□□□□□ -2.24
SGCB-203ENST00000514133 ABCA3Q99758 1704 aa1.07□□□□□ -2.24
SGCB-203ENST00000514133 EPPK1P58107 5090 aaKnown RBP1.07□□□□□ -2.24
SGCB-203ENST00000514133 TRGV1A0A0A0MS02 117 aa1.07□□□□□ -2.24
SGCB-203ENST00000514133 UBE2L5PA0A1B0GUS4 154 aa1.07□□□□□ -2.24
SGCB-203ENST00000514133 SSSCA1O60232 199 aa1.07□□□□□ -2.24
SGCB-203ENST00000514133 PPP1R17O96001 155 aa1.07□□□□□ -2.24
SGCB-203ENST00000514133 SMIM6P0DI80 62 aa1.07□□□□□ -2.24
SGCB-203ENST00000514133 UBE2L3P68036 154 aaKnown RBP1.07□□□□□ -2.24
SGCB-203ENST00000514133 TSLPQ969D9 159 aa1.07□□□□□ -2.24
SGCB-203ENST00000514133 ADCY10Q96PN6 1610 aa1.07□□□□□ -2.24
SGCB-203ENST00000514133 CFAP54Q96N23 3096 aa1.07□□□□□ -2.24
SGCB-203ENST00000514133 NCOR2Q9Y618 2525 aa1.07□□□□□ -2.24
SGCB-203ENST00000514133 SPHKAPQ2M3C7 1700 aa1.06□□□□□ -2.24
SGCB-203ENST00000514133 KMT2CQ8NEZ4 4911 aaKnown RBP1.06□□□□□ -2.24
SGCB-203ENST00000514133 TPRP12270 2363 aaKnown RBP1.06□□□□□ -2.24
SGCB-203ENST00000514133 GVINP1Q7Z2Y8 2422 aa1.06□□□□□ -2.24
SGCB-203ENST00000514133 MUC5BQ9HC84 5762 aaPredicted RBP1.06□□□□□ -2.24
SGCB-203ENST00000514133 HTTP42858 3142 aa1.06□□□□□ -2.24
SGCB-203ENST00000514133 MROH2BQ7Z745 1585 aa1.06□□□□□ -2.24
SGCB-203ENST00000514133 TRAV1-2A0A0B4J238 106 aa1.06□□□□□ -2.24
SGCB-203ENST00000514133 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.06□□□□□ -2.24
SGCB-203ENST00000514133 BPESC1Q9GZL8 116 aa1.06□□□□□ -2.24
SGCB-203ENST00000514133 CYP4F30PQ9H0H9 118 aa1.06□□□□□ -2.24
SGCB-203ENST00000514133 FCGBPQ9Y6R7 5405 aaPredicted RBP1.06□□□□□ -2.24
SGCB-203ENST00000514133 CEP290O15078 2479 aa1.06□□□□□ -2.24
SGCB-203ENST00000514133 PXDNQ92626 1479 aa1.05□□□□□ -2.24
SGCB-203ENST00000514133 CPS1P31327 1500 aa1.05□□□□□ -2.24
SGCB-203ENST00000514133 ASPMQ8IZT6 3477 aa1.05□□□□□ -2.24
SGCB-203ENST00000514133 ZFYVE26Q68DK2 2539 aa1.05□□□□□ -2.24
SGCB-203ENST00000514133 SPINK8P0C7L1 97 aa1.05□□□□□ -2.24
SGCB-203ENST00000514133 RBP2P50120 134 aa1.05□□□□□ -2.24
SGCB-203ENST00000514133 ATP5EP56381 51 aaPredicted RBP1.05□□□□□ -2.24
SGCB-203ENST00000514133 HSD52Q0P140 79 aa1.05□□□□□ -2.24
SGCB-203ENST00000514133 SMIM11BQ8TCY0 68 aa1.05□□□□□ -2.24
SGCB-203ENST00000514133 MYOZ3Q8TDC0 251 aa1.05□□□□□ -2.24
SGCB-203ENST00000514133 WFDC6Q9BQY6 131 aa1.05□□□□□ -2.24
SGCB-203ENST00000514133 KRTAP4-1Q9BYQ7 146 aa1.05□□□□□ -2.24
SGCB-203ENST00000514133 DPH3P1Q9H4G8 78 aa1.05□□□□□ -2.24
SGCB-203ENST00000514133 SCP2D1Q9UJQ7 156 aa1.05□□□□□ -2.24
SGCB-203ENST00000514133 CEP250Q9BV73 2442 aa1.05□□□□□ -2.24
SGCB-203ENST00000514133 DCAF1Q9Y4B6 1507 aa1.05□□□□□ -2.24
SGCB-203ENST00000514133 UNC13BO14795 1591 aa1.04□□□□□ -2.24
SGCB-203ENST00000514133 TMEM131LA2VDJ0 1609 aa1.04□□□□□ -2.24
SGCB-203ENST00000514133 MAP3K4Q9Y6R4 1608 aa1.04□□□□□ -2.24
SGCB-203ENST00000514133 MYOM1P52179 1685 aa1.04□□□□□ -2.24
SGCB-203ENST00000514133 CNOT1A5YKK6 2376 aaKnown RBP1.04□□□□□ -2.24
SGCB-203ENST00000514133 CREBBPQ92793 2442 aa1.04□□□□□ -2.24
SGCB-203ENST00000514133 MACF1Q9UPN3 7388 aaKnown RBP1.04□□□□□ -2.24
SGCB-203ENST00000514133 A0A0D9SG42 100 aa1.04□□□□□ -2.24
SGCB-203ENST00000514133 POLA1P09884 1462 aaPredicted RBP1.04□□□□□ -2.24
SGCB-203ENST00000514133 MRC1P22897 1456 aa1.04□□□□□ -2.24
SGCB-203ENST00000514133 ZFYVE16Q7Z3T8 1539 aa1.04□□□□□ -2.24
SGCB-203ENST00000514133 GLI2P10070 1586 aa1.04□□□□□ -2.24
SGCB-203ENST00000514133 CENPFP49454 3210 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms