RNA–Protein interactions for RNA: ENST00000513588.5

CTNND2-215, Transcript of catenin delta 2, humanhuman

TSL 1 (best)

Gene CTNND2, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-215ENST00000513588 TINCRA0A1B0GVN0 87 aa8.42□□□□□ -1.06
CTNND2-215ENST00000513588 OR13C6PQ8NH95 151 aa8.42□□□□□ -1.06
CTNND2-215ENST00000513588 C9orf153Q5TBE3 101 aa8.41□□□□□ -1.06
CTNND2-215ENST00000513588 VSIG2Q96IQ7 327 aa8.41□□□□□ -1.06
CTNND2-215ENST00000513588 MIAQ16674 131 aa8.41□□□□□ -1.06
CTNND2-215ENST00000513588 LINC00158P58513 81 aa8.41□□□□□ -1.06
CTNND2-215ENST00000513588 CLEC2BQ92478 149 aa8.41□□□□□ -1.06
CTNND2-215ENST00000513588 NOP10Q9NPE3 64 aaKnown RBP8.41□□□□□ -1.06
CTNND2-215ENST00000513588 JMJD1CQ15652 2540 aa8.41□□□□□ -1.06
CTNND2-215ENST00000513588 TRIAP1O43715 76 aa8.4□□□□□ -1.06
CTNND2-215ENST00000513588 TMEM263Q8WUH6 116 aaKnown RBP8.4□□□□□ -1.06
CTNND2-215ENST00000513588 TRBV10-2A0A0K0K1G8 114 aa8.4□□□□□ -1.06
CTNND2-215ENST00000513588 LOC107984640A0A0U1RRK4 108 aa8.4□□□□□ -1.07
CTNND2-215ENST00000513588 MRPS36P82909 103 aaKnown RBP8.4□□□□□ -1.07
CTNND2-215ENST00000513588 C15orf53Q8NAA6 179 aa8.4□□□□□ -1.07
CTNND2-215ENST00000513588 C4orf3Q8WVX3 66 aa8.4□□□□□ -1.07
CTNND2-215ENST00000513588 TMEM243Q9BU79 118 aa8.4□□□□□ -1.07
CTNND2-215ENST00000513588 IGHV4-31P0DP07 118 aa8.39□□□□□ -1.07
CTNND2-215ENST00000513588 NDUFV3P56181 108 aaKnown RBP8.39□□□□□ -1.07
CTNND2-215ENST00000513588 EDA2RQ9HAV5 297 aa8.39□□□□□ -1.07
CTNND2-215ENST00000513588 FN1P02751 2386 aaKnown RBP8.39□□□□□ -1.07
CTNND2-215ENST00000513588 SMCPP49901 116 aaPredicted RBP8.39□□□□□ -1.07
CTNND2-215ENST00000513588 DEFB114Q30KQ6 69 aa8.39□□□□□ -1.07
CTNND2-215ENST00000513588 DEFB113Q30KQ7 82 aa8.39□□□□□ -1.07
CTNND2-215ENST00000513588 CCL24O00175 119 aa8.39□□□□□ -1.07
CTNND2-215ENST00000513588 CRPP02741 224 aa8.39□□□□□ -1.07
CTNND2-215ENST00000513588 TRAV4A0A0B4J268 109 aa8.38□□□□□ -1.07
CTNND2-215ENST00000513588 TEX49A0A1B0GTD5 131 aa8.38□□□□□ -1.07
CTNND2-215ENST00000513588 UBE2D4Q9Y2X8 147 aa8.38□□□□□ -1.07
CTNND2-215ENST00000513588 HIVEP2P31629 2446 aa8.38□□□□□ -1.07
CTNND2-215ENST00000513588 RELNP78509 3460 aa8.37□□□□□ -1.07
CTNND2-215ENST00000513588 K7EQD1 137 aa8.37□□□□□ -1.07
CTNND2-215ENST00000513588 RBMY1A1P0DJD3 496 aaKnown RBP8.37□□□□□ -1.07
CTNND2-215ENST00000513588 RBMY1CP0DJD4 496 aa8.37□□□□□ -1.07
CTNND2-215ENST00000513588 CMC4P56277 68 aaPredicted RBP8.37□□□□□ -1.07
CTNND2-215ENST00000513588 RBMY1FQ15415 496 aaKnown RBP8.37□□□□□ -1.07
CTNND2-215ENST00000513588 FAM110AQ9BQ89 295 aa8.37□□□□□ -1.07
CTNND2-215ENST00000513588 TRBV30A0A0K0K1B3 111 aa8.37□□□□□ -1.07
CTNND2-215ENST00000513588 ASH1LQ9NR48 2969 aaKnown RBP8.37□□□□□ -1.07
CTNND2-215ENST00000513588 HRNRQ86YZ3 2850 aaPredicted RBP8.36□□□□□ -1.07
CTNND2-215ENST00000513588 DEFB130BP0DP73 79 aa8.36□□□□□ -1.07
CTNND2-215ENST00000513588 DEFB130AP0DP74 79 aa8.36□□□□□ -1.07
CTNND2-215ENST00000513588 Q6ZTI0 123 aa8.36□□□□□ -1.07
CTNND2-215ENST00000513588 AMELXQ99217 191 aa8.36□□□□□ -1.07
CTNND2-215ENST00000513588 C11orf68Q9H3H3 251 aaKnown RBP8.36□□□□□ -1.07
CTNND2-215ENST00000513588 PF4P02776 101 aa8.36□□□□□ -1.07
CTNND2-215ENST00000513588 DAZ2Q13117 558 aaKnown RBP8.36□□□□□ -1.07
CTNND2-215ENST00000513588 Q6ZSN1 163 aa8.36□□□□□ -1.07
CTNND2-215ENST00000513588 DAZ4Q86SG3 579 aaKnown RBP8.36□□□□□ -1.07
CTNND2-215ENST00000513588 DAZ3Q9NR90 486 aaKnown RBP8.36□□□□□ -1.07
CTNND2-215ENST00000513588 EPG5Q9HCE0 2579 aa8.36□□□□□ -1.07
CTNND2-215ENST00000513588 H3BT86 120 aa8.35□□□□□ -1.07
CTNND2-215ENST00000513588 COL12A1Q99715 3063 aa8.35□□□□□ -1.07
CTNND2-215ENST00000513588 PAX4O43316 350 aa8.35□□□□□ -1.07
CTNND2-215ENST00000513588 ADAMTSL4-AS1Q5T5F5 129 aa8.35□□□□□ -1.07
CTNND2-215ENST00000513588 C1orf43Q9BWL3 253 aa8.35□□□□□ -1.07
CTNND2-215ENST00000513588 CHCHD7Q9BUK0 85 aa8.35□□□□□ -1.07
CTNND2-215ENST00000513588 Q9UF83 564 aa8.35□□□□□ -1.07
CTNND2-215ENST00000513588 ACANP16112 2415 aa8.34□□□□□ -1.07
CTNND2-215ENST00000513588 SPANXDQ9BXN6 97 aa8.34□□□□□ -1.07
CTNND2-215ENST00000513588 SPANXCQ9NY87 97 aa8.34□□□□□ -1.07
CTNND2-215ENST00000513588 RBMY1BA6NDE4 496 aaKnown RBP8.34□□□□□ -1.07
CTNND2-215ENST00000513588 RBMY1EA6NEQ0 496 aaKnown RBP8.34□□□□□ -1.07
CTNND2-215ENST00000513588 RBMY1DP0C7P1 496 aaKnown RBP8.34□□□□□ -1.07
CTNND2-215ENST00000513588 PFN2P35080 140 aa8.34□□□□□ -1.07
CTNND2-215ENST00000513588 CDIP1Q9H305 208 aa8.34□□□□□ -1.07
CTNND2-215ENST00000513588 TRBV10-1A0A0K0K1A3 114 aa8.34□□□□□ -1.07
CTNND2-215ENST00000513588 C6orf226Q5I0X4 101 aa8.34□□□□□ -1.07
CTNND2-215ENST00000513588 Q6ZSV7 163 aa8.34□□□□□ -1.07
CTNND2-215ENST00000513588 KLK5Q9Y337 293 aaPredicted RBP8.34□□□□□ -1.07
CTNND2-215ENST00000513588 TRAV25A0A0B4J276 109 aa8.33□□□□□ -1.08
CTNND2-215ENST00000513588 TIRAPP58753 221 aa8.33□□□□□ -1.08
CTNND2-215ENST00000513588 PIK3CD-AS1Q5SR53 167 aa8.33□□□□□ -1.08
CTNND2-215ENST00000513588 DCHS2Q6V1P9 2916 aa8.33□□□□□ -1.08
CTNND2-215ENST00000513588 NDUFA1O15239 70 aa8.33□□□□□ -1.08
CTNND2-215ENST00000513588 LINC00694P0DN24 101 aa8.32□□□□□ -1.08
CTNND2-215ENST00000513588 LINC00308Q8TCZ7 52 aa8.32□□□□□ -1.08
CTNND2-215ENST00000513588 CRLF1O75462 422 aa8.32□□□□□ -1.08
CTNND2-215ENST00000513588 C5orf47Q569G3 176 aa8.31□□□□□ -1.08
CTNND2-215ENST00000513588 CITED2Q99967 270 aaPredicted RBP8.31□□□□□ -1.08
CTNND2-215ENST00000513588 TRAV13-2A0A0B4J235 113 aa8.31□□□□□ -1.08
CTNND2-215ENST00000513588 NDUFA7O95182 113 aa8.31□□□□□ -1.08
CTNND2-215ENST00000513588 BAALC-AS2P0C853 105 aa8.31□□□□□ -1.08
CTNND2-215ENST00000513588 KRTAP10-9P60411 292 aa8.31□□□□□ -1.08
CTNND2-215ENST00000513588 ODF3L2Q3SX64 289 aa8.31□□□□□ -1.08
CTNND2-215ENST00000513588 PKIGQ9Y2B9 76 aa8.31□□□□□ -1.08
CTNND2-215ENST00000513588 FAM236AA0A1B0GUQ0 79 aa8.3□□□□□ -1.08
CTNND2-215ENST00000513588 FAM236BA0A1B0GV22 79 aa8.3□□□□□ -1.08
CTNND2-215ENST00000513588 DNAJC9-AS1A6NH13 148 aa8.3□□□□□ -1.08
CTNND2-215ENST00000513588 TIMM17BO60830 172 aa8.3□□□□□ -1.08
CTNND2-215ENST00000513588 GAGE2AQ6NT46 116 aa8.3□□□□□ -1.08
CTNND2-215ENST00000513588 C5orf38Q86SI9 138 aa8.3□□□□□ -1.08
CTNND2-215ENST00000513588 RNASE1P07998 156 aaKnown RBP8.3□□□□□ -1.08
CTNND2-215ENST00000513588 C16orf74Q96GX8 76 aa8.3□□□□□ -1.08
CTNND2-215ENST00000513588 LINC00242Q5T6M2 205 aa8.29□□□□□ -1.08
CTNND2-215ENST00000513588 TMEM86BQ8N661 226 aa8.29□□□□□ -1.08
CTNND2-215ENST00000513588 FLNCQ14315 2725 aa8.29□□□□□ -1.08
CTNND2-215ENST00000513588 H7C423 109 aa8.29□□□□□ -1.08
CTNND2-215ENST00000513588 LST1O00453 97 aa8.29□□□□□ -1.08
CTNND2-215ENST00000513588 SND1-IT1Q9HBX3 110 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms