RNA–Protein interactions for RNA: ENST00000513159.5

PTPN20-227, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-227ENST00000513159 LRCOL1A6NCL2 159 aa6.86□□□□□ -1.31
PTPN20-227ENST00000513159 S100A1P23297 94 aa6.86□□□□□ -1.31
PTPN20-227ENST00000513159 REG3AQ06141 175 aa6.86□□□□□ -1.31
PTPN20-227ENST00000513159 TIMM21Q9BVV7 248 aa6.86□□□□□ -1.31
PTPN20-227ENST00000513159 PGPEP1Q9NXJ5 209 aa6.86□□□□□ -1.31
PTPN20-227ENST00000513159 CSDC2Q9Y534 153 aaKnown RBP6.86□□□□□ -1.31
PTPN20-227ENST00000513159 LRP1BQ9NZR2 4599 aa6.85□□□□□ -1.31
PTPN20-227ENST00000513159 PRSS29PA6NIE9 313 aa6.85□□□□□ -1.31
PTPN20-227ENST00000513159 ZNF25P17030 456 aaPredicted RBP6.85□□□□□ -1.31
PTPN20-227ENST00000513159 LINC00310P59036 64 aa6.85□□□□□ -1.31
PTPN20-227ENST00000513159 RNASE13Q5GAN3 156 aaKnown RBP6.85□□□□□ -1.31
PTPN20-227ENST00000513159 AMMECR1LQ6DCA0 310 aa6.85□□□□□ -1.31
PTPN20-227ENST00000513159 C2orf66Q6UXQ4 117 aa6.85□□□□□ -1.31
PTPN20-227ENST00000513159 LINC00336Q6ZUF6 198 aa6.85□□□□□ -1.31
PTPN20-227ENST00000513159 Q6ZUT4 128 aa6.85□□□□□ -1.31
PTPN20-227ENST00000513159 DNAH8Q96JB1 4490 aa6.84□□□□□ -1.31
PTPN20-227ENST00000513159 IGLV10-54A0A075B6I4 117 aa6.84□□□□□ -1.31
PTPN20-227ENST00000513159 K7EMI3 77 aa6.84□□□□□ -1.31
PTPN20-227ENST00000513159 MIAQ16674 131 aa6.84□□□□□ -1.31
PTPN20-227ENST00000513159 NFE4Q86UQ8 179 aa6.84□□□□□ -1.31
PTPN20-227ENST00000513159 ZNF664Q8N3J9 261 aa6.84□□□□□ -1.31
PTPN20-227ENST00000513159 OR5A1Q8NGJ0 315 aa6.84□□□□□ -1.31
PTPN20-227ENST00000513159 PRSS3P2Q8NHM4 247 aa6.84□□□□□ -1.31
PTPN20-227ENST00000513159 IGKV2D-24A0A075B6R9 120 aa6.83□□□□□ -1.32
PTPN20-227ENST00000513159 A0A087WTM6 91 aa6.83□□□□□ -1.32
PTPN20-227ENST00000513159 IGKV3OR2-268A0A0C4DH90 116 aa6.83□□□□□ -1.32
PTPN20-227ENST00000513159 IGIPA6NJ69 53 aa6.83□□□□□ -1.32
PTPN20-227ENST00000513159 Q0VG73 95 aa6.83□□□□□ -1.32
PTPN20-227ENST00000513159 ORMDL2Q53FV1 153 aa6.83□□□□□ -1.32
PTPN20-227ENST00000513159 ZC2HC1BQ5TFG8 222 aa6.83□□□□□ -1.32
PTPN20-227ENST00000513159 LINC00173Q6ZV60 143 aa6.83□□□□□ -1.32
PTPN20-227ENST00000513159 SPANXA1Q9NS26 97 aa6.83□□□□□ -1.32
PTPN20-227ENST00000513159 PYGO1Q9Y3Y4 419 aa6.83□□□□□ -1.32
PTPN20-227ENST00000513159 IGLV4-3A0A075B6K6 122 aa6.82□□□□□ -1.32
PTPN20-227ENST00000513159 LINC00959A0A1B0GUT2 108 aa6.82□□□□□ -1.32
PTPN20-227ENST00000513159 A6NJY4 79 aa6.82□□□□□ -1.32
PTPN20-227ENST00000513159 NUPR1O60356 82 aa6.82□□□□□ -1.32
PTPN20-227ENST00000513159 CRPP02741 224 aa6.82□□□□□ -1.32
PTPN20-227ENST00000513159 FUSP35637 526 aaKnown RBP eCLIP6.82□□□□□ -1.32
PTPN20-227ENST00000513159 MRPS36P82909 103 aaKnown RBP6.82□□□□□ -1.32
PTPN20-227ENST00000513159 TOMM6Q96B49 74 aa6.82□□□□□ -1.32
PTPN20-227ENST00000513159 CYSLTR1Q9Y271 337 aa6.82□□□□□ -1.32
PTPN20-227ENST00000513159 LINC00614P0C842 121 aa6.81□□□□□ -1.32
PTPN20-227ENST00000513159 KRTAP10-2P60368 255 aa6.81□□□□□ -1.32
PTPN20-227ENST00000513159 PMCHL1Q16048 86 aa6.81□□□□□ -1.32
PTPN20-227ENST00000513159 FA2HQ7L5A8 372 aa6.81□□□□□ -1.32
PTPN20-227ENST00000513159 BAALCQ8WXS3 180 aa6.81□□□□□ -1.32
PTPN20-227ENST00000513159 TMEM18Q96B42 140 aa6.81□□□□□ -1.32
PTPN20-227ENST00000513159 TMEM101Q96IK0 257 aa6.81□□□□□ -1.32
PTPN20-227ENST00000513159 C1orf43Q9BWL3 253 aa6.81□□□□□ -1.32
PTPN20-227ENST00000513159 AP5S1Q9NUS5 200 aa6.81□□□□□ -1.32
PTPN20-227ENST00000513159 TRAV8-4A0A0B4J246 113 aa6.8□□□□□ -1.32
PTPN20-227ENST00000513159 LECT2O14960 151 aa6.8□□□□□ -1.32
PTPN20-227ENST00000513159 HIST1H2BKO60814 126 aa6.8□□□□□ -1.32
PTPN20-227ENST00000513159 HIST1H2BJP06899 126 aa6.8□□□□□ -1.32
PTPN20-227ENST00000513159 HIST1H2BOP23527 126 aa6.8□□□□□ -1.32
PTPN20-227ENST00000513159 HIST1H2BBP33778 126 aa6.8□□□□□ -1.32
PTPN20-227ENST00000513159 HIST1H2BDP58876 126 aa6.8□□□□□ -1.32
PTPN20-227ENST00000513159 HIST1H2BCP62807 126 aa6.8□□□□□ -1.32
PTPN20-227ENST00000513159 HIST2H2BEQ16778 126 aa6.8□□□□□ -1.32
PTPN20-227ENST00000513159 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.8□□□□□ -1.32
PTPN20-227ENST00000513159 DGAT2L7PQ6IED9 249 aa6.8□□□□□ -1.32
PTPN20-227ENST00000513159 CHCHD10Q8WYQ3 142 aaPredicted RBP6.8□□□□□ -1.32
PTPN20-227ENST00000513159 HIST1H2BHQ93079 126 aa6.8□□□□□ -1.32
PTPN20-227ENST00000513159 AMELXQ99217 191 aa6.8□□□□□ -1.32
PTPN20-227ENST00000513159 HIST1H2BNQ99877 126 aa6.8□□□□□ -1.32
PTPN20-227ENST00000513159 HIST1H2BMQ99879 126 aa6.8□□□□□ -1.32
PTPN20-227ENST00000513159 TM2D2Q9BX73 214 aa6.8□□□□□ -1.32
PTPN20-227ENST00000513159 BIRC6Q9NR09 4857 aa6.8□□□□□ -1.32
PTPN20-227ENST00000513159 GAGE12HA6NDE8 117 aa6.79□□□□□ -1.32
PTPN20-227ENST00000513159 FOXI1Q12951 378 aa6.79□□□□□ -1.32
PTPN20-227ENST00000513159 PDZD11Q5EBL8 140 aa6.79□□□□□ -1.32
PTPN20-227ENST00000513159 RMI2Q96E14 147 aa6.79□□□□□ -1.32
PTPN20-227ENST00000513159 TIMM17AQ99595 171 aa6.79□□□□□ -1.32
PTPN20-227ENST00000513159 TRAV13-1A0A0B4J241 112 aa6.78□□□□□ -1.32
PTPN20-227ENST00000513159 J3QL48 77 aa6.78□□□□□ -1.32
PTPN20-227ENST00000513159 CCL25O15444 150 aa6.78□□□□□ -1.32
PTPN20-227ENST00000513159 PSCAO43653 123 aa6.78□□□□□ -1.32
PTPN20-227ENST00000513159 ERASQ7Z444 233 aa6.78□□□□□ -1.32
PTPN20-227ENST00000513159 C15orf56Q8N910 161 aa6.78□□□□□ -1.32
PTPN20-227ENST00000513159 NTN5Q8WTR8 489 aaPredicted RBP6.78□□□□□ -1.32
PTPN20-227ENST00000513159 TMEM141Q96I45 108 aa6.78□□□□□ -1.32
PTPN20-227ENST00000513159 COX11Q9Y6N1 276 aa6.78□□□□□ -1.32
PTPN20-227ENST00000513159 APOBP04114 4563 aaKnown RBP6.77□□□□□ -1.32
PTPN20-227ENST00000513159 USP17L23D6RBM5 183 aa6.77□□□□□ -1.33
PTPN20-227ENST00000513159 SERF1AO75920 110 aa6.77□□□□□ -1.33
PTPN20-227ENST00000513159 XCL1P47992 114 aa6.77□□□□□ -1.33
PTPN20-227ENST00000513159 UBE2D1P51668 147 aa6.77□□□□□ -1.33
PTPN20-227ENST00000513159 COX6A2Q02221 97 aa6.77□□□□□ -1.33
PTPN20-227ENST00000513159 SMAGPQ0VAQ4 97 aa6.77□□□□□ -1.33
PTPN20-227ENST00000513159 SPATA12Q7Z6I5 190 aa6.77□□□□□ -1.33
PTPN20-227ENST00000513159 FAM19A2Q8N3H0 131 aa6.77□□□□□ -1.33
PTPN20-227ENST00000513159 Q8N814 137 aa6.77□□□□□ -1.33
PTPN20-227ENST00000513159 CHCHD1Q96BP2 118 aaKnown RBP6.77□□□□□ -1.33
PTPN20-227ENST00000513159 SCGB3A1Q96QR1 104 aa6.77□□□□□ -1.33
PTPN20-227ENST00000513159 IGHV3OR16-9A0A0B4J2B5 98 aa6.76□□□□□ -1.33
PTPN20-227ENST00000513159 HBDP02042 147 aa6.76□□□□□ -1.33
PTPN20-227ENST00000513159 PRSS1P07477 247 aa6.76□□□□□ -1.33
PTPN20-227ENST00000513159 NPSP0C0P6 89 aa6.76□□□□□ -1.33
PTPN20-227ENST00000513159 RAB5BP61020 215 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms