RNA–Protein interactions for RNA: ENST00000511898.1

BRD8-223, Transcript of bromodomain containing 8, human

TSL 5

Gene BRD8, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRD8-223	ENST00000511898	IGLC6	P0CF74	106 aa		5.15	□□□□□ -1.59
BRD8-223	ENST00000511898	EVI2A	P22794	236 aa		5.15	□□□□□ -1.59
BRD8-223	ENST00000511898	HINT1	P49773	126 aa	Predicted RBP	5.15	□□□□□ -1.59
BRD8-223	ENST00000511898	RPS20	P60866	119 aa	Known RBP	5.15	□□□□□ -1.59
BRD8-223	ENST00000511898	UBE2V1	Q13404	147 aa		5.15	□□□□□ -1.59
BRD8-223	ENST00000511898	SLC25A34	Q6PIV7	304 aa		5.15	□□□□□ -1.59
BRD8-223	ENST00000511898	SPATA12	Q7Z6I5	190 aa		5.15	□□□□□ -1.59
BRD8-223	ENST00000511898	ATOH7	Q8N100	152 aa		5.15	□□□□□ -1.59
BRD8-223	ENST00000511898	MSRB1	Q9NZV6	116 aa		5.15	□□□□□ -1.59
BRD8-223	ENST00000511898	COX11	Q9Y6N1	276 aa		5.15	□□□□□ -1.59
BRD8-223	ENST00000511898	DNAH5	Q8TE73	4624 aa		5.15	□□□□□ -1.59
BRD8-223	ENST00000511898	HSPG2	P98160	4391 aa		5.14	□□□□□ -1.59
BRD8-223	ENST00000511898	TRAV8-6	A0A0B4J262	113 aa		5.14	□□□□□ -1.59
BRD8-223	ENST00000511898	PTTG1IP	P53801	180 aa		5.14	□□□□□ -1.59
BRD8-223	ENST00000511898	MAJIN	Q3KP22	176 aa		5.14	□□□□□ -1.59
BRD8-223	ENST00000511898	FAM74A4	Q5TZK3	123 aa		5.14	□□□□□ -1.59
BRD8-223	ENST00000511898	FA2H	Q7L5A8	372 aa		5.14	□□□□□ -1.59
BRD8-223	ENST00000511898	NFE4	Q86UQ8	179 aa		5.14	□□□□□ -1.59
BRD8-223	ENST00000511898		Q8N3U1	123 aa		5.14	□□□□□ -1.59
BRD8-223	ENST00000511898	ABCA13	Q86UQ4	5058 aa		5.14	□□□□□ -1.59
BRD8-223	ENST00000511898	APOB	P04114	4563 aa	Known RBP	5.14	□□□□□ -1.59
BRD8-223	ENST00000511898		A0A087WTM6	91 aa		5.13	□□□□□ -1.59
BRD8-223	ENST00000511898	TRBV10-1	A0A0K0K1A3	114 aa		5.13	□□□□□ -1.59
BRD8-223	ENST00000511898	LRCOL1	A6NCL2	159 aa		5.13	□□□□□ -1.59
BRD8-223	ENST00000511898	C16orf90	A8MZG2	172 aa		5.13	□□□□□ -1.59
BRD8-223	ENST00000511898	UBE2D3	P61077	147 aa		5.13	□□□□□ -1.59
BRD8-223	ENST00000511898	UBE2D2	P62837	147 aa		5.13	□□□□□ -1.59
BRD8-223	ENST00000511898	LINC01545	Q5VT33	79 aa		5.13	□□□□□ -1.59
BRD8-223	ENST00000511898	C10orf126	Q8N4M7	172 aa		5.13	□□□□□ -1.59
BRD8-223	ENST00000511898	PRSS3P2	Q8NHM4	247 aa		5.13	□□□□□ -1.59
BRD8-223	ENST00000511898	TRBV7-3	A0A075B6L6	115 aa		5.12	□□□□□ -1.59
BRD8-223	ENST00000511898	IGHV3-30	P01768	117 aa		5.12	□□□□□ -1.59
BRD8-223	ENST00000511898	IGHV3-33	P01772	117 aa		5.12	□□□□□ -1.59
BRD8-223	ENST00000511898	IGHV3-30-3	P0DP02	117 aa		5.12	□□□□□ -1.59
BRD8-223	ENST00000511898	IGHV3-30-5	P0DP03	117 aa		5.12	□□□□□ -1.59
BRD8-223	ENST00000511898	SPANXN1	Q5VSR9	72 aa		5.12	□□□□□ -1.59
BRD8-223	ENST00000511898	FAM104B	Q5XKR9	115 aa		5.12	□□□□□ -1.59
BRD8-223	ENST00000511898	LINC00173	Q6ZV60	143 aa		5.12	□□□□□ -1.59
BRD8-223	ENST00000511898	FER1L6-AS1	Q8NA97	138 aa		5.12	□□□□□ -1.59
BRD8-223	ENST00000511898	NEXN-AS1	Q8NBZ9	246 aa		5.12	□□□□□ -1.59
BRD8-223	ENST00000511898	hDV102S1	A0JD36	115 aa		5.11	□□□□□ -1.59
BRD8-223	ENST00000511898		M0QY20	66 aa		5.11	□□□□□ -1.59
BRD8-223	ENST00000511898	CCL25	O15444	150 aa		5.11	□□□□□ -1.59
BRD8-223	ENST00000511898	CDK2AP2	O75956	126 aa		5.11	□□□□□ -1.59
BRD8-223	ENST00000511898	COX8A	P10176	69 aa		5.11	□□□□□ -1.59
BRD8-223	ENST00000511898	FUS	P35637	526 aa	Known RBP eCLIP	5.11	□□□□□ -1.59
BRD8-223	ENST00000511898	RPL36A	P83881	106 aa	Known RBP	5.11	□□□□□ -1.59
BRD8-223	ENST00000511898	BVES-AS1	Q5T3Y7	98 aa		5.11	□□□□□ -1.59
BRD8-223	ENST00000511898	LYZL1	Q6UWQ5	148 aa		5.11	□□□□□ -1.59
BRD8-223	ENST00000511898	DAZ4	Q86SG3	579 aa	Known RBP	5.11	□□□□□ -1.59
BRD8-223	ENST00000511898	ORMDL3	Q8N138	153 aa		5.11	□□□□□ -1.59
BRD8-223	ENST00000511898	MAPKAPK5-AS1	Q8N8E1	139 aa		5.11	□□□□□ -1.59
BRD8-223	ENST00000511898	RPL36AL	Q969Q0	106 aa	Known RBP	5.11	□□□□□ -1.59
BRD8-223	ENST00000511898	PRELID3A	Q96N28	172 aa		5.11	□□□□□ -1.59
BRD8-223	ENST00000511898	CNFN	Q9BYD5	112 aa		5.11	□□□□□ -1.59
BRD8-223	ENST00000511898	KRTAP4-5	Q9BYR2	181 aa		5.11	□□□□□ -1.59
BRD8-223	ENST00000511898	DAZ3	Q9NR90	486 aa	Known RBP	5.11	□□□□□ -1.59
BRD8-223	ENST00000511898	TAX1BP3	O14907	124 aa		5.1	□□□□□ -1.59
BRD8-223	ENST00000511898	PPBP	P02775	128 aa		5.1	□□□□□ -1.59
BRD8-223	ENST00000511898	CACNG7	P62955	275 aa		5.1	□□□□□ -1.59
BRD8-223	ENST00000511898	SEC11A	P67812	179 aa		5.1	□□□□□ -1.59
BRD8-223	ENST00000511898	LAGE3	Q14657	143 aa		5.1	□□□□□ -1.59
BRD8-223	ENST00000511898	VAMP3	Q15836	100 aa		5.1	□□□□□ -1.59
BRD8-223	ENST00000511898	MPV17L2	Q567V2	206 aa		5.1	□□□□□ -1.59
BRD8-223	ENST00000511898	NTM-AS1	Q6ZSK4	140 aa		5.1	□□□□□ -1.59
BRD8-223	ENST00000511898	DNAJC30	Q96LL9	226 aa		5.1	□□□□□ -1.59
BRD8-223	ENST00000511898	TRBV6-8	A0A0A6YYG3	113 aa		5.09	□□□□□ -1.59
BRD8-223	ENST00000511898		F5H697	171 aa		5.09	□□□□□ -1.59
BRD8-223	ENST00000511898	ZNF56	Q15929	161 aa		5.09	□□□□□ -1.59
BRD8-223	ENST00000511898	MRPL51	Q4U2R6	128 aa	Known RBP	5.09	□□□□□ -1.59
BRD8-223	ENST00000511898	AP1S3	Q96PC3	154 aa		5.09	□□□□□ -1.59
BRD8-223	ENST00000511898	TPPP3	Q9BW30	176 aa		5.09	□□□□□ -1.59
BRD8-223	ENST00000511898	CDIP1	Q9H305	208 aa		5.09	□□□□□ -1.59
BRD8-223	ENST00000511898		Q9HAA7	133 aa		5.09	□□□□□ -1.59
BRD8-223	ENST00000511898	LINC01546	A6NGU7	62 aa		5.08	□□□□□ -1.6
BRD8-223	ENST00000511898		D6R8Y8	96 aa		5.08	□□□□□ -1.6
BRD8-223	ENST00000511898	ZNF561-AS1	K7EIQ3	104 aa		5.08	□□□□□ -1.6
BRD8-223	ENST00000511898	HBD	P02042	147 aa		5.08	□□□□□ -1.6
BRD8-223	ENST00000511898	CKS2	P33552	79 aa		5.08	□□□□□ -1.6
BRD8-223	ENST00000511898	IFI27	P40305	119 aa	Predicted RBP	5.08	□□□□□ -1.6
BRD8-223	ENST00000511898	KRTAP10-1	P60331	282 aa		5.08	□□□□□ -1.6
BRD8-223	ENST00000511898	WFDC2	Q14508	124 aa		5.08	□□□□□ -1.6
BRD8-223	ENST00000511898	TMEM97	Q5BJF2	176 aa		5.08	□□□□□ -1.6
BRD8-223	ENST00000511898	SUMO4	Q6EEV6	95 aa		5.08	□□□□□ -1.6
BRD8-223	ENST00000511898	CHCHD7	Q9BUK0	85 aa		5.08	□□□□□ -1.6
BRD8-223	ENST00000511898		A0A096LNJ9	63 aa		5.07	□□□□□ -1.6
BRD8-223	ENST00000511898	TRAV8-3	A0A0A6YYJ7	113 aa		5.07	□□□□□ -1.6
BRD8-223	ENST00000511898		A6NDN8	102 aa		5.07	□□□□□ -1.6
BRD8-223	ENST00000511898	SMIM17	P0DL12	118 aa		5.07	□□□□□ -1.6
BRD8-223	ENST00000511898	XG	P55808	180 aa		5.07	□□□□□ -1.6
BRD8-223	ENST00000511898	TWIST1	Q15672	202 aa		5.07	□□□□□ -1.6
BRD8-223	ENST00000511898	ENHO	Q6UWT2	76 aa		5.07	□□□□□ -1.6
BRD8-223	ENST00000511898	AMN1	Q8IY45	258 aa		5.07	□□□□□ -1.6
BRD8-223	ENST00000511898	BOD1L2	Q8IYS8	172 aa		5.07	□□□□□ -1.6
BRD8-223	ENST00000511898	IFI27L1	Q96BM0	104 aa		5.07	□□□□□ -1.6
BRD8-223	ENST00000511898	MAP1LC3A	Q9H492	121 aa		5.07	□□□□□ -1.6
BRD8-223	ENST00000511898	DPH3P1	Q9H4G8	78 aa		5.07	□□□□□ -1.6
BRD8-223	ENST00000511898	NXT2	Q9NPJ8	142 aa	Known RBP	5.07	□□□□□ -1.6
BRD8-223	ENST00000511898	KLK12	Q9UKR0	248 aa		5.07	□□□□□ -1.6
BRD8-223	ENST00000511898	FAT1	Q14517	4588 aa		5.07	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms