RNA–Protein interactions for RNA: ENST00000509743.6

SSBP2-213, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 4

Gene SSBP2, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-213ENST00000509743 OR5A1Q8NGJ0 315 aa5.55□□□□□ -1.52
SSBP2-213ENST00000509743 TMEM101Q96IK0 257 aa5.55□□□□□ -1.52
SSBP2-213ENST00000509743 TM2D2Q9BX73 214 aa5.55□□□□□ -1.52
SSBP2-213ENST00000509743 PRO0255Q9UI72 69 aa5.55□□□□□ -1.52
SSBP2-213ENST00000509743 NIPBLQ6KC79 2804 aaeCLIP5.54□□□□□ -1.52
SSBP2-213ENST00000509743 LOC100131303A0A0U1RQF7 123 aa5.54□□□□□ -1.52
SSBP2-213ENST00000509743 H3BRM9 83 aa5.54□□□□□ -1.52
SSBP2-213ENST00000509743 TAX1BP3O14907 124 aa5.54□□□□□ -1.52
SSBP2-213ENST00000509743 GCSHP23434 173 aa5.54□□□□□ -1.52
SSBP2-213ENST00000509743 UBE2D1P51668 147 aa5.54□□□□□ -1.52
SSBP2-213ENST00000509743 TIRAPP58753 221 aa5.54□□□□□ -1.52
SSBP2-213ENST00000509743 DAD1P61803 113 aa5.54□□□□□ -1.52
SSBP2-213ENST00000509743 FAM19A3Q7Z5A8 133 aa5.54□□□□□ -1.52
SSBP2-213ENST00000509743 CEND1Q8N111 149 aa5.54□□□□□ -1.52
SSBP2-213ENST00000509743 Q8NAQ8 132 aa5.54□□□□□ -1.52
SSBP2-213ENST00000509743 HIST1H4GQ99525 98 aa5.54□□□□□ -1.52
SSBP2-213ENST00000509743 GEMIN7Q9H840 131 aaKnown RBP5.54□□□□□ -1.52
SSBP2-213ENST00000509743 ZFHX3Q15911 3703 aa5.53□□□□□ -1.52
SSBP2-213ENST00000509743 IGLV5-45A0A087WSX0 123 aa5.53□□□□□ -1.52
SSBP2-213ENST00000509743 TRBV6-8A0A0A6YYG3 113 aa5.53□□□□□ -1.52
SSBP2-213ENST00000509743 ATP5G1P05496 136 aa5.53□□□□□ -1.52
SSBP2-213ENST00000509743 SPART-AS1P0CW21 52 aa5.53□□□□□ -1.52
SSBP2-213ENST00000509743 PTTG1IPP53801 180 aa5.53□□□□□ -1.52
SSBP2-213ENST00000509743 HERVK_113P63121 156 aa5.53□□□□□ -1.52
SSBP2-213ENST00000509743 OXLD1Q5BKU9 147 aa5.53□□□□□ -1.52
SSBP2-213ENST00000509743 RNASE13Q5GAN3 156 aaKnown RBP5.53□□□□□ -1.52
SSBP2-213ENST00000509743 PRIMA1Q86XR5 153 aa5.53□□□□□ -1.52
SSBP2-213ENST00000509743 LINC00469Q8N7U9 141 aa5.53□□□□□ -1.52
SSBP2-213ENST00000509743 ATP6V0E2Q8NHE4 81 aa5.53□□□□□ -1.52
SSBP2-213ENST00000509743 C2CD3Q4AC94 2353 aa5.52□□□□□ -1.53
SSBP2-213ENST00000509743 TMEM238LA0A1B0GVL6 79 aa5.52□□□□□ -1.53
SSBP2-213ENST00000509743 A6NJY4 79 aa5.52□□□□□ -1.53
SSBP2-213ENST00000509743 PAX4O43316 350 aa5.52□□□□□ -1.53
SSBP2-213ENST00000509743 GYPEP15421 78 aa5.52□□□□□ -1.53
SSBP2-213ENST00000509743 TSPEAR-AS2P59090 65 aa5.52□□□□□ -1.53
SSBP2-213ENST00000509743 KRTAP10-11P60412 298 aa5.52□□□□□ -1.53
SSBP2-213ENST00000509743 CHCHD5Q9BSY4 110 aa5.52□□□□□ -1.53
SSBP2-213ENST00000509743 CDC42SE2Q9NRR3 84 aa5.52□□□□□ -1.53
SSBP2-213ENST00000509743 SPANXB1Q9NS25 103 aaPredicted RBP5.52□□□□□ -1.53
SSBP2-213ENST00000509743 WNK1Q9H4A3 2382 aa5.51□□□□□ -1.53
SSBP2-213ENST00000509743 AGRNO00468 2067 aa5.51□□□□□ -1.53
SSBP2-213ENST00000509743 TRAV26-1A0A087WT03 109 aa5.51□□□□□ -1.53
SSBP2-213ENST00000509743 IGHV1-58A0A0C4DH39 117 aa5.51□□□□□ -1.53
SSBP2-213ENST00000509743 A0A0J9YY99 117 aa5.51□□□□□ -1.53
SSBP2-213ENST00000509743 SMIM13P0DJ93 91 aa5.51□□□□□ -1.53
SSBP2-213ENST00000509743 IGHV3-30-3P0DP02 117 aa5.51□□□□□ -1.53
SSBP2-213ENST00000509743 FXYD2P54710 66 aa5.51□□□□□ -1.53
SSBP2-213ENST00000509743 SRSF9Q13242 221 aaKnown RBP eCLIP5.51□□□□□ -1.53
SSBP2-213ENST00000509743 SH2D6Q7Z4S9 175 aa5.51□□□□□ -1.53
SSBP2-213ENST00000509743 VSIG2Q96IQ7 327 aa5.51□□□□□ -1.53
SSBP2-213ENST00000509743 SETD2Q9BYW2 2564 aaPredicted RBP5.51□□□□□ -1.53
SSBP2-213ENST00000509743 C9orf118A6NHY6 69 aa5.5□□□□□ -1.53
SSBP2-213ENST00000509743 TMEM238C9JI98 176 aa5.5□□□□□ -1.53
SSBP2-213ENST00000509743 GAGE6Q13070 117 aa5.5□□□□□ -1.53
SSBP2-213ENST00000509743 LINC00242Q5T6M2 205 aa5.5□□□□□ -1.53
SSBP2-213ENST00000509743 TENM1Q9UKZ4 2725 aa5.49□□□□□ -1.53
SSBP2-213ENST00000509743 IGHV3-64A0A075B6Q5 118 aa5.49□□□□□ -1.53
SSBP2-213ENST00000509743 TRAV13-1A0A0B4J241 112 aa5.49□□□□□ -1.53
SSBP2-213ENST00000509743 IGLV5-39A0A0G2JS06 123 aa5.49□□□□□ -1.53
SSBP2-213ENST00000509743 A0A1B0GWB2 263 aa5.49□□□□□ -1.53
SSBP2-213ENST00000509743 DEFB4AO15263 64 aa5.49□□□□□ -1.53
SSBP2-213ENST00000509743 SPINK8P0C7L1 97 aa5.49□□□□□ -1.53
SSBP2-213ENST00000509743 VAMP3Q15836 100 aa5.49□□□□□ -1.53
SSBP2-213ENST00000509743 ZFAND6Q6FIF0 208 aa5.49□□□□□ -1.53
SSBP2-213ENST00000509743 KRTAP3-3Q9BYR6 98 aa5.49□□□□□ -1.53
SSBP2-213ENST00000509743 KRTAP3-2Q9BYR7 98 aa5.49□□□□□ -1.53
SSBP2-213ENST00000509743 C11orf68Q9H3H3 251 aaKnown RBP5.49□□□□□ -1.53
SSBP2-213ENST00000509743 NHP2Q9NX24 153 aaKnown RBP5.49□□□□□ -1.53
SSBP2-213ENST00000509743 CDKN2A-AS1Q9UH64 79 aa5.49□□□□□ -1.53
SSBP2-213ENST00000509743 NDUFA12Q9UI09 145 aa5.49□□□□□ -1.53
SSBP2-213ENST00000509743 CELA1Q9UNI1 258 aa5.49□□□□□ -1.53
SSBP2-213ENST00000509743 TRAV8-3A0A0A6YYJ7 113 aa5.48□□□□□ -1.53
SSBP2-213ENST00000509743 A0A1B0GUV1 79 aa5.48□□□□□ -1.53
SSBP2-213ENST00000509743 NDUFA1O15239 70 aa5.48□□□□□ -1.53
SSBP2-213ENST00000509743 UBE2V1Q13404 147 aa5.48□□□□□ -1.53
SSBP2-213ENST00000509743 MRPL23Q16540 153 aaKnown RBP5.48□□□□□ -1.53
SSBP2-213ENST00000509743 SAMD5Q5TGI4 173 aa5.48□□□□□ -1.53
SSBP2-213ENST00000509743 Q6ZVH6 145 aa5.48□□□□□ -1.53
SSBP2-213ENST00000509743 ICOSQ9Y6W8 199 aa5.48□□□□□ -1.53
SSBP2-213ENST00000509743 A0A0J9YXY3 114 aa5.47□□□□□ -1.53
SSBP2-213ENST00000509743 SMIM1B2RUZ4 78 aa5.47□□□□□ -1.53
SSBP2-213ENST00000509743 F5H768 121 aa5.47□□□□□ -1.53
SSBP2-213ENST00000509743 H3BNG1 76 aa5.47□□□□□ -1.53
SSBP2-213ENST00000509743 K7EP13 123 aa5.47□□□□□ -1.53
SSBP2-213ENST00000509743 CCL25O15444 150 aa5.47□□□□□ -1.53
SSBP2-213ENST00000509743 TIMM17BO60830 172 aa5.47□□□□□ -1.53
SSBP2-213ENST00000509743 IGHV3-30P01768 117 aa5.47□□□□□ -1.53
SSBP2-213ENST00000509743 IGHV3-30-5P0DP03 117 aa5.47□□□□□ -1.53
SSBP2-213ENST00000509743 C12orf74Q32Q52 190 aa5.47□□□□□ -1.53
SSBP2-213ENST00000509743 C10orf126Q8N4M7 172 aa5.47□□□□□ -1.53
SSBP2-213ENST00000509743 VWFP04275 2813 aa5.47□□□□□ -1.53
SSBP2-213ENST00000509743 CUBNO60494 3623 aa5.46□□□□□ -1.54
SSBP2-213ENST00000509743 A0A1W2PPM0 123 aa5.46□□□□□ -1.54
SSBP2-213ENST00000509743 G3V4G9 280 aa5.46□□□□□ -1.54
SSBP2-213ENST00000509743 H3BUT2 72 aa5.46□□□□□ -1.54
SSBP2-213ENST00000509743 RBX1P62877 108 aa5.46□□□□□ -1.54
SSBP2-213ENST00000509743 RPL24P83731 157 aaKnown RBP5.46□□□□□ -1.54
SSBP2-213ENST00000509743 COX6A2Q02221 97 aa5.46□□□□□ -1.54
SSBP2-213ENST00000509743 GTF2H5Q6ZYL4 71 aa5.46□□□□□ -1.54
SSBP2-213ENST00000509743 RAB37Q96AX2 223 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms