RNA–Protein interactions for RNA: ENST00000509692.5

SKP2-205, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 1,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-205ENST00000509692 UBE2D4Q9Y2X8 147 aa10.98□□□□□ -0.65
SKP2-205ENST00000509692 TRAV8-3A0A0A6YYJ7 113 aa10.98□□□□□ -0.65
SKP2-205ENST00000509692 LINC01546A6NGU7 62 aa10.98□□□□□ -0.65
SKP2-205ENST00000509692 CRPP02741 224 aa10.98□□□□□ -0.65
SKP2-205ENST00000509692 NFE4Q86UQ8 179 aa10.98□□□□□ -0.65
SKP2-205ENST00000509692 OR5A1Q8NGJ0 315 aa10.98□□□□□ -0.65
SKP2-205ENST00000509692 Q0VG73 95 aa10.97□□□□□ -0.65
SKP2-205ENST00000509692 DGAT2L7PQ6IED9 249 aa10.97□□□□□ -0.65
SKP2-205ENST00000509692 CLPSL2Q6UWE3 100 aa10.97□□□□□ -0.65
SKP2-205ENST00000509692 ENHOQ6UWT2 76 aa10.97□□□□□ -0.65
SKP2-205ENST00000509692 TIMM21Q9BVV7 248 aa10.97□□□□□ -0.65
SKP2-205ENST00000509692 URB1-AS1Q96HZ7 61 aa10.96□□□□□ -0.65
SKP2-205ENST00000509692 PRR34Q9NV39 138 aa10.96□□□□□ -0.65
SKP2-205ENST00000509692 CSDC2Q9Y534 153 aaKnown RBP10.96□□□□□ -0.65
SKP2-205ENST00000509692 APOBP04114 4563 aaKnown RBP10.96□□□□□ -0.66
SKP2-205ENST00000509692 LINC00614P0C842 121 aa10.95□□□□□ -0.66
SKP2-205ENST00000509692 G0S2P27469 103 aa10.95□□□□□ -0.66
SKP2-205ENST00000509692 RAB5BP61020 215 aa10.95□□□□□ -0.66
SKP2-205ENST00000509692 REG3AQ06141 175 aa10.95□□□□□ -0.66
SKP2-205ENST00000509692 C2orf66Q6UXQ4 117 aa10.95□□□□□ -0.66
SKP2-205ENST00000509692 CDC42SE2Q9NRR3 84 aa10.95□□□□□ -0.66
SKP2-205ENST00000509692 SPANXA1Q9NS26 97 aa10.95□□□□□ -0.66
SKP2-205ENST00000509692 AP5S1Q9NUS5 200 aa10.95□□□□□ -0.66
SKP2-205ENST00000509692 CYSLTR1Q9Y271 337 aa10.95□□□□□ -0.66
SKP2-205ENST00000509692 HSPG2P98160 4391 aa10.94□□□□□ -0.66
SKP2-205ENST00000509692 MIAQ16674 131 aa10.94□□□□□ -0.66
SKP2-205ENST00000509692 ZNF664Q8N3J9 261 aa10.94□□□□□ -0.66
SKP2-205ENST00000509692 IGKV3OR2-268A0A0C4DH90 116 aa10.93□□□□□ -0.66
SKP2-205ENST00000509692 RMI2Q96E14 147 aa10.93□□□□□ -0.66
SKP2-205ENST00000509692 IGKV2D-24A0A075B6R9 120 aa10.92□□□□□ -0.66
SKP2-205ENST00000509692 Q6ZUT4 128 aa10.92□□□□□ -0.66
SKP2-205ENST00000509692 BAGE3Q86Y29 109 aa10.92□□□□□ -0.66
SKP2-205ENST00000509692 TOMM6Q96B49 74 aa10.92□□□□□ -0.66
SKP2-205ENST00000509692 TM2D2Q9BX73 214 aa10.92□□□□□ -0.66
SKP2-205ENST00000509692 PYGO1Q9Y3Y4 419 aa10.92□□□□□ -0.66
SKP2-205ENST00000509692 OPRPNQ99935 248 aaPredicted RBP10.91□□□□□ -0.66
SKP2-205ENST00000509692 C1orf43Q9BWL3 253 aa10.91□□□□□ -0.66
SKP2-205ENST00000509692 PSCAO43653 123 aa10.91□□□□□ -0.66
SKP2-205ENST00000509692 KRTAP10-2P60368 255 aa10.91□□□□□ -0.66
SKP2-205ENST00000509692 MRPS36P82909 103 aaKnown RBP10.91□□□□□ -0.66
SKP2-205ENST00000509692 RNASE13Q5GAN3 156 aaKnown RBP10.91□□□□□ -0.66
SKP2-205ENST00000509692 SPATA12Q7Z6I5 190 aa10.91□□□□□ -0.66
SKP2-205ENST00000509692 FAM104AQ969W3 186 aa10.91□□□□□ -0.66
SKP2-205ENST00000509692 CHCHD1Q96BP2 118 aaKnown RBP10.91□□□□□ -0.66
SKP2-205ENST00000509692 COX11Q9Y6N1 276 aa10.91□□□□□ -0.66
SKP2-205ENST00000509692 TRAV8-4A0A0B4J246 113 aa10.9□□□□□ -0.66
SKP2-205ENST00000509692 IGLV10-54A0A075B6I4 117 aa10.89□□□□□ -0.67
SKP2-205ENST00000509692 IGLV4-3A0A075B6K6 122 aa10.89□□□□□ -0.67
SKP2-205ENST00000509692 LINC01549A6NIU2 74 aa10.89□□□□□ -0.67
SKP2-205ENST00000509692 IGIPA6NJ69 53 aa10.89□□□□□ -0.67
SKP2-205ENST00000509692 C16orf90A8MZG2 172 aa10.89□□□□□ -0.67
SKP2-205ENST00000509692 PMCHL1Q16048 86 aa10.89□□□□□ -0.67
SKP2-205ENST00000509692 A0A096LNJ9 63 aa10.88□□□□□ -0.67
SKP2-205ENST00000509692 HIST1H2BKO60814 126 aa10.88□□□□□ -0.67
SKP2-205ENST00000509692 HIST1H2BJP06899 126 aa10.88□□□□□ -0.67
SKP2-205ENST00000509692 HIST1H2BOP23527 126 aa10.88□□□□□ -0.67
SKP2-205ENST00000509692 HIST1H2BBP33778 126 aa10.88□□□□□ -0.67
SKP2-205ENST00000509692 HIST1H2BDP58876 126 aa10.88□□□□□ -0.67
SKP2-205ENST00000509692 HIST1H2BCP62807 126 aa10.88□□□□□ -0.67
SKP2-205ENST00000509692 HIST2H2BEQ16778 126 aa10.88□□□□□ -0.67
SKP2-205ENST00000509692 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.88□□□□□ -0.67
SKP2-205ENST00000509692 HIST1H2BHQ93079 126 aa10.88□□□□□ -0.67
SKP2-205ENST00000509692 TMEM141Q96I45 108 aa10.88□□□□□ -0.67
SKP2-205ENST00000509692 SCGB3A1Q96QR1 104 aa10.88□□□□□ -0.67
SKP2-205ENST00000509692 HIST1H2BNQ99877 126 aa10.88□□□□□ -0.67
SKP2-205ENST00000509692 HIST1H2BMQ99879 126 aa10.88□□□□□ -0.67
SKP2-205ENST00000509692 LINC00959A0A1B0GUT2 108 aa10.87□□□□□ -0.67
SKP2-205ENST00000509692 HBDP02042 147 aa10.87□□□□□ -0.67
SKP2-205ENST00000509692 NPSP0C0P6 89 aa10.87□□□□□ -0.67
SKP2-205ENST00000509692 ERASQ7Z444 233 aa10.87□□□□□ -0.67
SKP2-205ENST00000509692 TIMM17AQ99595 171 aa10.87□□□□□ -0.67
SKP2-205ENST00000509692 C1orf196B1AJZ1 125 aa10.87□□□□□ -0.67
SKP2-205ENST00000509692 SERF1AO75920 110 aa10.87□□□□□ -0.67
SKP2-205ENST00000509692 HSBP1O75506 76 aa10.86□□□□□ -0.67
SKP2-205ENST00000509692 LINC00310P59036 64 aa10.86□□□□□ -0.67
SKP2-205ENST00000509692 SS18Q15532 418 aa10.86□□□□□ -0.67
SKP2-205ENST00000509692 Q6ZN92 141 aa10.86□□□□□ -0.67
SKP2-205ENST00000509692 CHCHD10Q8WYQ3 142 aaPredicted RBP10.86□□□□□ -0.67
SKP2-205ENST00000509692 A0A087WTM6 91 aa10.85□□□□□ -0.67
SKP2-205ENST00000509692 TRAV13-1A0A0B4J241 112 aa10.85□□□□□ -0.67
SKP2-205ENST00000509692 FUSP35637 526 aaKnown RBP eCLIP10.85□□□□□ -0.67
SKP2-205ENST00000509692 KRTAP26-1Q6PEX3 210 aa10.85□□□□□ -0.67
SKP2-205ENST00000509692 TEX43Q6ZNM6 134 aa10.85□□□□□ -0.67
SKP2-205ENST00000509692 MAPKAPK5-AS1Q8N8E1 139 aa10.85□□□□□ -0.67
SKP2-205ENST00000509692 VCX2Q9H322 139 aa10.85□□□□□ -0.67
SKP2-205ENST00000509692 PCLOQ9Y6V0 5065 aa10.85□□□□□ -0.67
SKP2-205ENST00000509692 IFITM10A6NMD0 228 aa10.84□□□□□ -0.67
SKP2-205ENST00000509692 PAPPA-AS1Q5QFB9 102 aa10.84□□□□□ -0.67
SKP2-205ENST00000509692 GAGE12HA6NDE8 117 aa10.84□□□□□ -0.67
SKP2-205ENST00000509692 CCL25O15444 150 aa10.84□□□□□ -0.67
SKP2-205ENST00000509692 PDZD11Q5EBL8 140 aa10.84□□□□□ -0.67
SKP2-205ENST00000509692 ZC2HC1BQ5TFG8 222 aa10.84□□□□□ -0.67
SKP2-205ENST00000509692 AMELXQ99217 191 aa10.84□□□□□ -0.67
SKP2-205ENST00000509692 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.83□□□□□ -0.68
SKP2-205ENST00000509692 NUPR1O60356 82 aa10.83□□□□□ -0.68
SKP2-205ENST00000509692 XCL1P47992 114 aa10.83□□□□□ -0.68
SKP2-205ENST00000509692 LINC00173Q6ZV60 143 aa10.83□□□□□ -0.68
SKP2-205ENST00000509692 FAM19A2Q8N3H0 131 aa10.83□□□□□ -0.68
SKP2-205ENST00000509692 BAALCQ8WXS3 180 aa10.83□□□□□ -0.68
SKP2-205ENST00000509692 C2orf88Q9BSF0 95 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms