RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 MGPP08493 103 aa1.03□□□□□ -2.24
DEPDC1B-204ENST00000509006 CCL18P55774 89 aa1.03□□□□□ -2.24
DEPDC1B-204ENST00000509006 KRTAP12-3P60328 96 aa1.03□□□□□ -2.24
DEPDC1B-204ENST00000509006 SNRPFP62306 86 aaKnown RBP1.03□□□□□ -2.24
DEPDC1B-204ENST00000509006 PSMG4Q5JS54 123 aa1.03□□□□□ -2.24
DEPDC1B-204ENST00000509006 Q5VV11 94 aa1.03□□□□□ -2.24
DEPDC1B-204ENST00000509006 ALKAL2Q6UX46 152 aa1.03□□□□□ -2.24
DEPDC1B-204ENST00000509006 WFDC6Q9BQY6 131 aa1.03□□□□□ -2.24
DEPDC1B-204ENST00000509006 TET3O43151 1660 aa1.03□□□□□ -2.24
DEPDC1B-204ENST00000509006 AFDNP55196 1824 aaKnown RBP1.03□□□□□ -2.25
DEPDC1B-204ENST00000509006 CASP8AP2Q9UKL3 1982 aa1.03□□□□□ -2.25
DEPDC1B-204ENST00000509006 PRRC2BQ5JSZ5 2229 aaKnown RBP1.03□□□□□ -2.25
DEPDC1B-204ENST00000509006 CACNA1GO43497 2377 aa1.03□□□□□ -2.25
DEPDC1B-204ENST00000509006 A0A0G2JND7 137 aa1.02□□□□□ -2.25
DEPDC1B-204ENST00000509006 A0A1B0GWA3 101 aa1.02□□□□□ -2.25
DEPDC1B-204ENST00000509006 IGLC7A0M8Q6 106 aa1.02□□□□□ -2.25
DEPDC1B-204ENST00000509006 CLPSL1A2RUU4 121 aa1.02□□□□□ -2.25
DEPDC1B-204ENST00000509006 H3BQF6 201 aa1.02□□□□□ -2.25
DEPDC1B-204ENST00000509006 M0R135 149 aa1.02□□□□□ -2.25
DEPDC1B-204ENST00000509006 SNRNP200O75643 2136 aaKnown RBP1.02□□□□□ -2.25
DEPDC1B-204ENST00000509006 ACYP2P14621 99 aa1.02□□□□□ -2.25
DEPDC1B-204ENST00000509006 MRC1P22897 1456 aa1.02□□□□□ -2.25
DEPDC1B-204ENST00000509006 MYOM1P52179 1685 aa1.02□□□□□ -2.25
DEPDC1B-204ENST00000509006 TOP2BQ02880 1626 aa1.02□□□□□ -2.25
DEPDC1B-204ENST00000509006 EDC4Q6P2E9 1401 aaKnown RBP1.02□□□□□ -2.25
DEPDC1B-204ENST00000509006 SBF2Q86WG5 1849 aa1.02□□□□□ -2.25
DEPDC1B-204ENST00000509006 INTS1Q8N201 2190 aaKnown RBP1.02□□□□□ -2.25
DEPDC1B-204ENST00000509006 EHBP1L1Q8N3D4 1523 aa1.02□□□□□ -2.25
DEPDC1B-204ENST00000509006 BPESC1Q9GZL8 116 aa1.02□□□□□ -2.25
DEPDC1B-204ENST00000509006 SHANK2Q9UPX8 1470 aa1.02□□□□□ -2.25
DEPDC1B-204ENST00000509006 ARL2-SNX15V9GYD0 113 aa1.02□□□□□ -2.25
DEPDC1B-204ENST00000509006 PLXNA1Q9UIW2 1896 aa1.01□□□□□ -2.25
DEPDC1B-204ENST00000509006 PPLO60437 1756 aa1.01□□□□□ -2.25
DEPDC1B-204ENST00000509006 RGPD4Q7Z3J3 1758 aa1.01□□□□□ -2.25
DEPDC1B-204ENST00000509006 SUPT6HQ7KZ85 1726 aaKnown RBP1.01□□□□□ -2.25
DEPDC1B-204ENST00000509006 H7BZZ5 65 aa1.01□□□□□ -2.25
DEPDC1B-204ENST00000509006 PIN1P1O15428 100 aa1.01□□□□□ -2.25
DEPDC1B-204ENST00000509006 ANGP03950 147 aaKnown RBP1.01□□□□□ -2.25
DEPDC1B-204ENST00000509006 S100A3P33764 101 aa1.01□□□□□ -2.25
DEPDC1B-204ENST00000509006 KRTAP21-3Q3LHN1 58 aa1.01□□□□□ -2.25
DEPDC1B-204ENST00000509006 ETDBQ3ZM63 59 aa1.01□□□□□ -2.25
DEPDC1B-204ENST00000509006 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.01□□□□□ -2.25
DEPDC1B-204ENST00000509006 SMIM11BQ8TCY0 68 aa1.01□□□□□ -2.25
DEPDC1B-204ENST00000509006 C20orf78Q9BR46 151 aa1.01□□□□□ -2.25
DEPDC1B-204ENST00000509006 ST20Q9HBF5 79 aa1.01□□□□□ -2.25
DEPDC1B-204ENST00000509006 LINC01558Q9Y6Z2 57 aa1.01□□□□□ -2.25
DEPDC1B-204ENST00000509006 PHRF1Q9P1Y6 1649 aaKnown RBP1□□□□□ -2.25
DEPDC1B-204ENST00000509006 MAP3K4Q9Y6R4 1608 aa1□□□□□ -2.25
DEPDC1B-204ENST00000509006 MED12Q93074 2177 aa1□□□□□ -2.25
DEPDC1B-204ENST00000509006 PI4KAP42356 2102 aa1□□□□□ -2.25
DEPDC1B-204ENST00000509006 A0A087WTM6 91 aa1□□□□□ -2.25
DEPDC1B-204ENST00000509006 TRGV1A0A0A0MS02 117 aa1□□□□□ -2.25
DEPDC1B-204ENST00000509006 TRAV1-2A0A0B4J238 106 aa1□□□□□ -2.25
DEPDC1B-204ENST00000509006 NMBP08949 121 aa1□□□□□ -2.25
DEPDC1B-204ENST00000509006 SPCS1Q9Y6A9 102 aa1□□□□□ -2.25
DEPDC1B-204ENST00000509006 VWDEQ8N2E2 1590 aa1□□□□□ -2.25
DEPDC1B-204ENST00000509006 DLG5Q8TDM6 1919 aa0.99□□□□□ -2.25
DEPDC1B-204ENST00000509006 PSME4Q14997 1843 aa0.99□□□□□ -2.25
DEPDC1B-204ENST00000509006 ARL14EPLP0DKL9 152 aa0.99□□□□□ -2.25
DEPDC1B-204ENST00000509006 GCHFRP30047 84 aa0.99□□□□□ -2.25
DEPDC1B-204ENST00000509006 KRTAP12-1P59990 96 aa0.99□□□□□ -2.25
DEPDC1B-204ENST00000509006 CFAP126Q5VTH2 177 aa0.99□□□□□ -2.25
DEPDC1B-204ENST00000509006 LINC00643Q86TS7 51 aa0.99□□□□□ -2.25
DEPDC1B-204ENST00000509006 FAM223AQ8IWN6 122 aa0.99□□□□□ -2.25
DEPDC1B-204ENST00000509006 LINC00846Q9NV44 126 aa0.99□□□□□ -2.25
DEPDC1B-204ENST00000509006 E9PCH4 1651 aa0.99□□□□□ -2.25
DEPDC1B-204ENST00000509006 COL4A1P02462 1669 aa0.99□□□□□ -2.25
DEPDC1B-204ENST00000509006 KIF14Q15058 1648 aa0.99□□□□□ -2.25
DEPDC1B-204ENST00000509006 MYO3AQ8NEV4 1616 aa0.99□□□□□ -2.25
DEPDC1B-204ENST00000509006 CDK13Q14004 1512 aaKnown RBP0.99□□□□□ -2.25
DEPDC1B-204ENST00000509006 DCAF1Q9Y4B6 1507 aa0.99□□□□□ -2.25
DEPDC1B-204ENST00000509006 ERVK-7P63135 1459 aa0.99□□□□□ -2.25
DEPDC1B-204ENST00000509006 NLRP1Q9C000 1473 aa0.99□□□□□ -2.25
DEPDC1B-204ENST00000509006 RGPD3A6NKT7 1758 aaPredicted RBP0.98□□□□□ -2.25
DEPDC1B-204ENST00000509006 LOC285556D6RIA3 1793 aa0.98□□□□□ -2.25
DEPDC1B-204ENST00000509006 MUC6Q6W4X9 2439 aa0.98□□□□□ -2.25
DEPDC1B-204ENST00000509006 MON2Q7Z3U7 1717 aa0.98□□□□□ -2.25
DEPDC1B-204ENST00000509006 RAPGEF6Q8TEU7 1601 aa0.98□□□□□ -2.25
DEPDC1B-204ENST00000509006 A0A096LNT2 108 aa0.98□□□□□ -2.25
DEPDC1B-204ENST00000509006 HMGN2P05204 90 aaKnown RBP0.98□□□□□ -2.25
DEPDC1B-204ENST00000509006 SFTA2Q6UW10 78 aa0.98□□□□□ -2.25
DEPDC1B-204ENST00000509006 PLAC4Q8WY50 150 aa0.98□□□□□ -2.25
DEPDC1B-204ENST00000509006 Q96NJ1 140 aa0.98□□□□□ -2.25
DEPDC1B-204ENST00000509006 PRR15LQ9BU68 103 aa0.98□□□□□ -2.25
DEPDC1B-204ENST00000509006 HMGXB3Q12766 1538 aa0.98□□□□□ -2.25
DEPDC1B-204ENST00000509006 ARFGEF1Q9Y6D6 1849 aa0.98□□□□□ -2.25
DEPDC1B-204ENST00000509006 SIPA1L3O60292 1781 aaPredicted RBP0.98□□□□□ -2.25
DEPDC1B-204ENST00000509006 LRRC9Q6ZRR7 1453 aa0.98□□□□□ -2.25
DEPDC1B-204ENST00000509006 NRXN1Q9ULB1 1477 aa0.98□□□□□ -2.25
DEPDC1B-204ENST00000509006 TET1Q8NFU7 2136 aa0.97□□□□□ -2.25
DEPDC1B-204ENST00000509006 C7orf77A4D0Y5 90 aa0.97□□□□□ -2.25
DEPDC1B-204ENST00000509006 FAM223BA6NKX1 122 aa0.97□□□□□ -2.25
DEPDC1B-204ENST00000509006 D6R8Y8 96 aa0.97□□□□□ -2.25
DEPDC1B-204ENST00000509006 LEPROTL1O95214 131 aa0.97□□□□□ -2.25
DEPDC1B-204ENST00000509006 ARMS2P0C7Q2 107 aa0.97□□□□□ -2.25
DEPDC1B-204ENST00000509006 MUSTN1Q8IVN3 82 aa0.97□□□□□ -2.25
DEPDC1B-204ENST00000509006 LINC01600Q96MT4 127 aa0.97□□□□□ -2.25
DEPDC1B-204ENST00000509006 SMCO4Q9NRQ5 59 aa0.97□□□□□ -2.25
DEPDC1B-204ENST00000509006 ABCC1P33527 1531 aa0.97□□□□□ -2.25
DEPDC1B-204ENST00000509006 MAP3K1Q13233 1512 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms