RNA–Protein interactions for RNA: ENST00000505484.5

PRDM5-207, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best)

Gene PRDM5, Length 2,396 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-207ENST00000505484 UBE2D4Q9Y2X8 147 aa11.61□□□□□ -0.55
PRDM5-207ENST00000505484 ATOX1O00244 68 aa11.61□□□□□ -0.55
PRDM5-207ENST00000505484 BAALC-AS2P0C853 105 aa11.61□□□□□ -0.55
PRDM5-207ENST00000505484 TRAV12-2A0A075B6T6 113 aa11.6□□□□□ -0.55
PRDM5-207ENST00000505484 RNASE13Q5GAN3 156 aaKnown RBP11.6□□□□□ -0.55
PRDM5-207ENST00000505484 GAGE2AQ6NT46 116 aa11.6□□□□□ -0.55
PRDM5-207ENST00000505484 RNF152Q8N8N0 203 aa11.6□□□□□ -0.55
PRDM5-207ENST00000505484 LOC107984640A0A0U1RRK4 108 aa11.59□□□□□ -0.55
PRDM5-207ENST00000505484 CHCHD7Q9BUK0 85 aa11.59□□□□□ -0.55
PRDM5-207ENST00000505484 SMIM9A6NGZ8 99 aa11.59□□□□□ -0.55
PRDM5-207ENST00000505484 HELZ2Q9BYK8 2649 aaKnown RBP11.58□□□□□ -0.56
PRDM5-207ENST00000505484 IGHG2P01859 326 aa11.58□□□□□ -0.56
PRDM5-207ENST00000505484 FAM19A5Q7Z5A7 132 aaPredicted RBP11.58□□□□□ -0.56
PRDM5-207ENST00000505484 CDKN2A-AS1Q9UH64 79 aa11.57□□□□□ -0.56
PRDM5-207ENST00000505484 C22orf24Q9Y442 160 aa11.57□□□□□ -0.56
PRDM5-207ENST00000505484 PTPN13Q12923 2485 aa11.57□□□□□ -0.56
PRDM5-207ENST00000505484 PF4V1P10720 104 aa11.57□□□□□ -0.56
PRDM5-207ENST00000505484 SNRPD3P62318 126 aaKnown RBP11.57□□□□□ -0.56
PRDM5-207ENST00000505484 ZNF469Q96JG9 3925 aaPredicted RBP11.57□□□□□ -0.56
PRDM5-207ENST00000505484 KLK5Q9Y337 293 aaPredicted RBP11.56□□□□□ -0.56
PRDM5-207ENST00000505484 IGLV5-39A0A0G2JS06 123 aa11.56□□□□□ -0.56
PRDM5-207ENST00000505484 ZANQ9Y493 2812 aa11.56□□□□□ -0.56
PRDM5-207ENST00000505484 ZNF415Q09FC8 603 aa11.55□□□□□ -0.56
PRDM5-207ENST00000505484 SPINK13Q1W4C9 94 aa11.55□□□□□ -0.56
PRDM5-207ENST00000505484 LMO4P61968 165 aa11.55□□□□□ -0.56
PRDM5-207ENST00000505484 PIK3CD-AS1Q5SR53 167 aa11.55□□□□□ -0.56
PRDM5-207ENST00000505484 OR13C6PQ8NH95 151 aa11.55□□□□□ -0.56
PRDM5-207ENST00000505484 Q9H8V8 135 aa11.55□□□□□ -0.56
PRDM5-207ENST00000505484 IGKV3-20P01619 116 aa11.54□□□□□ -0.56
PRDM5-207ENST00000505484 IGLV1-40P01703 118 aa11.54□□□□□ -0.56
PRDM5-207ENST00000505484 Q8N2B8 174 aa11.54□□□□□ -0.56
PRDM5-207ENST00000505484 IGHV3OR16-10A0A075B7F0 116 aa11.54□□□□□ -0.56
PRDM5-207ENST00000505484 DOPEY2Q9Y3R5 2298 aa11.53□□□□□ -0.56
PRDM5-207ENST00000505484 EDN2P20800 178 aa11.53□□□□□ -0.56
PRDM5-207ENST00000505484 GCN1Q92616 2671 aaKnown RBP11.53□□□□□ -0.56
PRDM5-207ENST00000505484 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.53□□□□□ -0.56
PRDM5-207ENST00000505484 IGKV2-29A2NJV5 120 aaPredicted RBP11.53□□□□□ -0.56
PRDM5-207ENST00000505484 K7EQG2 157 aa11.53□□□□□ -0.56
PRDM5-207ENST00000505484 SOSTDC1Q6X4U4 206 aa11.53□□□□□ -0.56
PRDM5-207ENST00000505484 LINC00467Q9BRT7 94 aa11.53□□□□□ -0.56
PRDM5-207ENST00000505484 ATP5J2P56134 94 aa11.52□□□□□ -0.57
PRDM5-207ENST00000505484 PROK1P58294 105 aa11.52□□□□□ -0.57
PRDM5-207ENST00000505484 RPL18AQ02543 176 aaKnown RBP11.52□□□□□ -0.57
PRDM5-207ENST00000505484 WIPF1O43516 503 aa11.52□□□□□ -0.57
PRDM5-207ENST00000505484 PF4P02776 101 aa11.52□□□□□ -0.57
PRDM5-207ENST00000505484 MALP21145 153 aa11.52□□□□□ -0.57
PRDM5-207ENST00000505484 TMEM258P61165 79 aa11.52□□□□□ -0.57
PRDM5-207ENST00000505484 IGHV3-73A0A0B4J1V6 119 aa11.51□□□□□ -0.57
PRDM5-207ENST00000505484 HIST2H2BCQ6DN03 193 aa11.51□□□□□ -0.57
PRDM5-207ENST00000505484 OVOL2Q9BRP0 275 aa11.51□□□□□ -0.57
PRDM5-207ENST00000505484 hADV29S1A0JD25 119 aa11.5□□□□□ -0.57
PRDM5-207ENST00000505484 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.5□□□□□ -0.57
PRDM5-207ENST00000505484 FAM218AQ96MZ4 157 aa11.5□□□□□ -0.57
PRDM5-207ENST00000505484 APCP25054 2843 aa11.5□□□□□ -0.57
PRDM5-207ENST00000505484 HIST2H2BDQ6DRA6 164 aa11.5□□□□□ -0.57
PRDM5-207ENST00000505484 FAM19A3Q7Z5A8 133 aa11.49□□□□□ -0.57
PRDM5-207ENST00000505484 PRIMA1Q86XR5 153 aa11.49□□□□□ -0.57
PRDM5-207ENST00000505484 ANKRD17O75179 2603 aaKnown RBP11.49□□□□□ -0.57
PRDM5-207ENST00000505484 RPL28P46779 137 aaKnown RBP11.49□□□□□ -0.57
PRDM5-207ENST00000505484 Q6JHZ5 121 aa11.49□□□□□ -0.57
PRDM5-207ENST00000505484 SERP2Q8N6R1 65 aa11.48□□□□□ -0.57
PRDM5-207ENST00000505484 TRAV13-2A0A0B4J235 113 aa11.48□□□□□ -0.57
PRDM5-207ENST00000505484 A6NDX4 124 aa11.48□□□□□ -0.57
PRDM5-207ENST00000505484 COX6A2Q02221 97 aa11.48□□□□□ -0.57
PRDM5-207ENST00000505484 CFHR3Q02985 330 aa11.48□□□□□ -0.57
PRDM5-207ENST00000505484 ZNF625Q96I27 306 aaPredicted RBP11.48□□□□□ -0.57
PRDM5-207ENST00000505484 BPESC1Q9GZL8 116 aa11.48□□□□□ -0.57
PRDM5-207ENST00000505484 DNAL4O96015 105 aa11.47□□□□□ -0.57
PRDM5-207ENST00000505484 LINC00242Q5T6M2 205 aa11.47□□□□□ -0.57
PRDM5-207ENST00000505484 DGAT2L7PQ6IED9 249 aa11.47□□□□□ -0.57
PRDM5-207ENST00000505484 IGHV3OR16-12A0A075B7B8 117 aa11.47□□□□□ -0.57
PRDM5-207ENST00000505484 SMIM1B2RUZ4 78 aa11.47□□□□□ -0.57
PRDM5-207ENST00000505484 IGHV3-53P01767 116 aa11.46□□□□□ -0.57
PRDM5-207ENST00000505484 Q6ZSN1 163 aa11.46□□□□□ -0.57
PRDM5-207ENST00000505484 Q9UF83 564 aa11.46□□□□□ -0.57
PRDM5-207ENST00000505484 KRTAP10-9P60411 292 aa11.46□□□□□ -0.58
PRDM5-207ENST00000505484 DPH3Q96FX2 82 aa11.46□□□□□ -0.58
PRDM5-207ENST00000505484 A0A0U1RRA0 63 aa11.45□□□□□ -0.58
PRDM5-207ENST00000505484 RBMY1A1P0DJD3 496 aaKnown RBP11.45□□□□□ -0.58
PRDM5-207ENST00000505484 RBMY1CP0DJD4 496 aa11.45□□□□□ -0.58
PRDM5-207ENST00000505484 RBMY1FQ15415 496 aaKnown RBP11.45□□□□□ -0.58
PRDM5-207ENST00000505484 LY6EQ16553 131 aa11.45□□□□□ -0.58
PRDM5-207ENST00000505484 OBSCN-AS1Q96MR7 158 aa11.45□□□□□ -0.58
PRDM5-207ENST00000505484 UPK3BQ9BT76 320 aa11.45□□□□□ -0.58
PRDM5-207ENST00000505484 ABCA2Q9BZC7 2435 aa11.45□□□□□ -0.58
PRDM5-207ENST00000505484 BLCAPP62952 87 aa11.45□□□□□ -0.58
PRDM5-207ENST00000505484 BRD3OSQ6XYD6 125 aa11.45□□□□□ -0.58
PRDM5-207ENST00000505484 KNCNA6PVL3 124 aa11.44□□□□□ -0.58
PRDM5-207ENST00000505484 CCL19Q99731 98 aa11.44□□□□□ -0.58
PRDM5-207ENST00000505484 Q9HAA7 133 aa11.44□□□□□ -0.58
PRDM5-207ENST00000505484 NAV2Q8IVL1 2488 aa11.44□□□□□ -0.58
PRDM5-207ENST00000505484 TRAV13-1A0A0B4J241 112 aa11.43□□□□□ -0.58
PRDM5-207ENST00000505484 H3BUX3 64 aa11.43□□□□□ -0.58
PRDM5-207ENST00000505484 CYSTM1Q9H1C7 97 aa11.43□□□□□ -0.58
PRDM5-207ENST00000505484 ITPR2Q14571 2701 aa11.43□□□□□ -0.58
PRDM5-207ENST00000505484 CRPP02741 224 aa11.42□□□□□ -0.58
PRDM5-207ENST00000505484 HECTD1Q9ULT8 2610 aa11.42□□□□□ -0.58
PRDM5-207ENST00000505484 FASNP49327 2511 aaKnown RBP11.42□□□□□ -0.58
PRDM5-207ENST00000505484 IGHV3-38A0A0C4DH36 116 aa11.42□□□□□ -0.58
PRDM5-207ENST00000505484 A8MTW9 85 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms