RNA–Protein interactions for RNA: ENST00000504211.5

UBE2D3-217, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-217ENST00000504211 ST20Q9HBF5 79 aa3.22□□□□□ -1.89
UBE2D3-217ENST00000504211 TEX15Q9BXT5 2789 aa3.21□□□□□ -1.9
UBE2D3-217ENST00000504211 IGLV2-18A0A075B6J9 118 aa3.21□□□□□ -1.9
UBE2D3-217ENST00000504211 MUC21A0A0G2JKD1 596 aa3.21□□□□□ -1.9
UBE2D3-217ENST00000504211 MUC21A0A140T8X8 626 aa3.21□□□□□ -1.9
UBE2D3-217ENST00000504211 LOC389332A0A1B0GUA5 103 aa3.21□□□□□ -1.9
UBE2D3-217ENST00000504211 C7orf71A4D174 169 aa3.21□□□□□ -1.9
UBE2D3-217ENST00000504211 OR4C46A6NHA9 309 aa3.21□□□□□ -1.9
UBE2D3-217ENST00000504211 F6UB75 175 aa3.21□□□□□ -1.9
UBE2D3-217ENST00000504211 LINC01619G3V211 115 aa3.21□□□□□ -1.9
UBE2D3-217ENST00000504211 H3BVH4 76 aa3.21□□□□□ -1.9
UBE2D3-217ENST00000504211 EVI2AP22794 236 aa3.21□□□□□ -1.9
UBE2D3-217ENST00000504211 S100A4P26447 101 aaKnown RBP3.21□□□□□ -1.9
UBE2D3-217ENST00000504211 FCER1GP30273 86 aa3.21□□□□□ -1.9
UBE2D3-217ENST00000504211 TSPOP30536 169 aa3.21□□□□□ -1.9
UBE2D3-217ENST00000504211 RNASE4P34096 147 aaKnown RBP3.21□□□□□ -1.9
UBE2D3-217ENST00000504211 SYNJ2BPP57105 145 aa3.21□□□□□ -1.9
UBE2D3-217ENST00000504211 NUTF2P61970 127 aaKnown RBP3.21□□□□□ -1.9
UBE2D3-217ENST00000504211 LGALS9BQ3B8N2 356 aa3.21□□□□□ -1.9
UBE2D3-217ENST00000504211 LGALS9CQ6DKI2 356 aa3.21□□□□□ -1.9
UBE2D3-217ENST00000504211 FOXI2Q6ZQN5 318 aa3.21□□□□□ -1.9
UBE2D3-217ENST00000504211 NTM-AS1Q6ZSK4 140 aa3.21□□□□□ -1.9
UBE2D3-217ENST00000504211 WFDC11Q8NEX6 87 aa3.21□□□□□ -1.9
UBE2D3-217ENST00000504211 OR2K2Q8NGT1 345 aa3.21□□□□□ -1.9
UBE2D3-217ENST00000504211 C20orf78Q9BR46 151 aa3.21□□□□□ -1.9
UBE2D3-217ENST00000504211 DPH3P1Q9H4G8 78 aa3.21□□□□□ -1.9
UBE2D3-217ENST00000504211 C16orf95Q9H693 158 aa3.21□□□□□ -1.9
UBE2D3-217ENST00000504211 MRPS16Q9Y3D3 137 aaKnown RBP3.21□□□□□ -1.9
UBE2D3-217ENST00000504211 PHLDA3Q9Y5J5 127 aa3.21□□□□□ -1.9
UBE2D3-217ENST00000504211 APCP25054 2843 aa3.21□□□□□ -1.9
UBE2D3-217ENST00000504211 PDZD2O15018 2839 aa3.2□□□□□ -1.9
UBE2D3-217ENST00000504211 CSMD2Q7Z408 3487 aa3.2□□□□□ -1.9
UBE2D3-217ENST00000504211 SETXQ7Z333 2677 aaKnown RBP3.2□□□□□ -1.9
UBE2D3-217ENST00000504211 CSPG4Q6UVK1 2322 aa3.2□□□□□ -1.9
UBE2D3-217ENST00000504211 IGKV3-7A0A075B6H7 116 aa3.2□□□□□ -1.9
UBE2D3-217ENST00000504211 TRAV25A0A0B4J276 109 aa3.2□□□□□ -1.9
UBE2D3-217ENST00000504211 LINC01549A6NIU2 74 aa3.2□□□□□ -1.9
UBE2D3-217ENST00000504211 HSBP1L1C9JCN9 74 aa3.2□□□□□ -1.9
UBE2D3-217ENST00000504211 SMKR1H3BMG3 65 aa3.2□□□□□ -1.9
UBE2D3-217ENST00000504211 NCR2O95944 276 aa3.2□□□□□ -1.9
UBE2D3-217ENST00000504211 ZNF688P0C7X2 276 aa3.2□□□□□ -1.9
UBE2D3-217ENST00000504211 RNASE3P12724 160 aaKnown RBP3.2□□□□□ -1.9
UBE2D3-217ENST00000504211 Q6ZQT7 251 aa3.2□□□□□ -1.9
UBE2D3-217ENST00000504211 OR11H1Q8NG94 326 aa3.2□□□□□ -1.9
UBE2D3-217ENST00000504211 OR9G4Q8NGQ1 327 aa3.2□□□□□ -1.9
UBE2D3-217ENST00000504211 IFI27L1Q96BM0 104 aa3.2□□□□□ -1.9
UBE2D3-217ENST00000504211 AP1S3Q96PC3 154 aa3.2□□□□□ -1.9
UBE2D3-217ENST00000504211 PMCHL2Q9BQD1 86 aa3.2□□□□□ -1.9
UBE2D3-217ENST00000504211 SNHG12Q9BXW3 62 aa3.2□□□□□ -1.9
UBE2D3-217ENST00000504211 MXRA5Q9NR99 2828 aa3.2□□□□□ -1.9
UBE2D3-217ENST00000504211 IGLV1-50A0A075B6I6 118 aa3.19□□□□□ -1.9
UBE2D3-217ENST00000504211 TRAV12-3A0A0B4J271 114 aa3.19□□□□□ -1.9
UBE2D3-217ENST00000504211 GNRH2O43555 120 aa3.19□□□□□ -1.9
UBE2D3-217ENST00000504211 HLA-DRB4P13762 266 aa3.19□□□□□ -1.9
UBE2D3-217ENST00000504211 G0S2P27469 103 aa3.19□□□□□ -1.9
UBE2D3-217ENST00000504211 CMC4P56277 68 aaPredicted RBP3.19□□□□□ -1.9
UBE2D3-217ENST00000504211 DEFB1P60022 68 aa3.19□□□□□ -1.9
UBE2D3-217ENST00000504211 DEFB114Q30KQ6 69 aa3.19□□□□□ -1.9
UBE2D3-217ENST00000504211 ORMDL2Q53FV1 153 aa3.19□□□□□ -1.9
UBE2D3-217ENST00000504211 AMTNQ6UX39 209 aa3.19□□□□□ -1.9
UBE2D3-217ENST00000504211 ATOH7Q8N100 152 aa3.19□□□□□ -1.9
UBE2D3-217ENST00000504211 PTH2Q96A98 100 aa3.19□□□□□ -1.9
UBE2D3-217ENST00000504211 LINC00467Q9BRT7 94 aa3.19□□□□□ -1.9
UBE2D3-217ENST00000504211 HLA-DRB4X5D2U9 266 aa3.19□□□□□ -1.9
UBE2D3-217ENST00000504211 FLNBO75369 2602 aaKnown RBP3.19□□□□□ -1.9
UBE2D3-217ENST00000504211 HECTD1Q9ULT8 2610 aa3.19□□□□□ -1.9
UBE2D3-217ENST00000504211 SPG11Q96JI7 2443 aa3.19□□□□□ -1.9
UBE2D3-217ENST00000504211 ZNF469Q96JG9 3925 aaPredicted RBP3.18□□□□□ -1.9
UBE2D3-217ENST00000504211 TRBV6-5A0A0K0K1A5 114 aa3.18□□□□□ -1.9
UBE2D3-217ENST00000504211 H3BMM0 161 aa3.18□□□□□ -1.9
UBE2D3-217ENST00000504211 DLEU1O43261 78 aa3.18□□□□□ -1.9
UBE2D3-217ENST00000504211 CD7P09564 240 aa3.18□□□□□ -1.9
UBE2D3-217ENST00000504211 SMIM17P0DL12 118 aa3.18□□□□□ -1.9
UBE2D3-217ENST00000504211 COX8AP10176 69 aa3.18□□□□□ -1.9
UBE2D3-217ENST00000504211 MAJINQ3KP22 176 aa3.18□□□□□ -1.9
UBE2D3-217ENST00000504211 CEMP1Q6PRD7 247 aaPredicted RBP3.18□□□□□ -1.9
UBE2D3-217ENST00000504211 SMIM2Q9BVW6 85 aa3.18□□□□□ -1.9
UBE2D3-217ENST00000504211 EDA2RQ9HAV5 297 aa3.18□□□□□ -1.9
UBE2D3-217ENST00000504211 GOLT1BQ9Y3E0 138 aa3.18□□□□□ -1.9
UBE2D3-217ENST00000504211 TSSC4Q9Y5U2 329 aaPredicted RBP3.18□□□□□ -1.9
UBE2D3-217ENST00000504211 DOPEY2Q9Y3R5 2298 aa3.18□□□□□ -1.9
UBE2D3-217ENST00000504211 ZANQ9Y493 2812 aa3.17□□□□□ -1.9
UBE2D3-217ENST00000504211 AKAP9Q99996 3911 aa3.17□□□□□ -1.9
UBE2D3-217ENST00000504211 TRAV12-1A0A0B4J245 112 aa3.17□□□□□ -1.9
UBE2D3-217ENST00000504211 TRAV26-2A0A0B4J265 109 aa3.17□□□□□ -1.9
UBE2D3-217ENST00000504211 A0A1B0GV90 55 aa3.17□□□□□ -1.9
UBE2D3-217ENST00000504211 TCAPO15273 167 aa3.17□□□□□ -1.9
UBE2D3-217ENST00000504211 SIVA1O15304 175 aa3.17□□□□□ -1.9
UBE2D3-217ENST00000504211 POLR2KP53803 58 aaKnown RBP3.17□□□□□ -1.9
UBE2D3-217ENST00000504211 SPINK13Q1W4C9 94 aa3.17□□□□□ -1.9
UBE2D3-217ENST00000504211 DEFB136Q30KP8 78 aa3.17□□□□□ -1.9
UBE2D3-217ENST00000504211 COL5A1-AS1Q5SY13 56 aa3.17□□□□□ -1.9
UBE2D3-217ENST00000504211 SLC25A34Q6PIV7 304 aa3.17□□□□□ -1.9
UBE2D3-217ENST00000504211 DYNLRB2Q8TF09 96 aa3.17□□□□□ -1.9
UBE2D3-217ENST00000504211 ZNF418Q8TF45 676 aaPredicted RBP3.17□□□□□ -1.9
UBE2D3-217ENST00000504211 TOMM6Q96B49 74 aa3.17□□□□□ -1.9
UBE2D3-217ENST00000504211 TIMM8BQ9Y5J9 83 aaPredicted RBP3.17□□□□□ -1.9
UBE2D3-217ENST00000504211 ITPR3Q14573 2671 aa3.17□□□□□ -1.9
UBE2D3-217ENST00000504211 USP9YO00507 2555 aaPredicted RBP3.17□□□□□ -1.9
UBE2D3-217ENST00000504211 MAP1AP78559 2803 aaPredicted RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 250 ms