RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 G0S2P27469 103 aa10.57□□□□□ -0.72
SCLT1-204ENST00000503215 RPS20P60866 119 aaKnown RBP10.57□□□□□ -0.72
SCLT1-204ENST00000503215 KRTAP26-1Q6PEX3 210 aa10.57□□□□□ -0.72
SCLT1-204ENST00000503215 ORAOV1Q8WV07 137 aa10.57□□□□□ -0.72
SCLT1-204ENST00000503215 VAMP8Q9BV40 100 aa10.57□□□□□ -0.72
SCLT1-204ENST00000503215 USP17L23D6RBM5 183 aa10.56□□□□□ -0.72
SCLT1-204ENST00000503215 CRPP02741 224 aa10.56□□□□□ -0.72
SCLT1-204ENST00000503215 CACNG7P62955 275 aa10.56□□□□□ -0.72
SCLT1-204ENST00000503215 WDR73Q6P4I2 378 aa10.56□□□□□ -0.72
SCLT1-204ENST00000503215 LINC00269Q8N2A0 174 aa10.56□□□□□ -0.72
SCLT1-204ENST00000503215 NUDT10Q8NFP7 164 aa10.56□□□□□ -0.72
SCLT1-204ENST00000503215 NUDT11Q96G61 164 aa10.56□□□□□ -0.72
SCLT1-204ENST00000503215 HLA-DQA1P01909 254 aa10.55□□□□□ -0.72
SCLT1-204ENST00000503215 NTF3P20783 257 aa10.55□□□□□ -0.72
SCLT1-204ENST00000503215 SMIM12Q96EX1 92 aa10.55□□□□□ -0.72
SCLT1-204ENST00000503215 CHAC1Q9BUX1 264 aa10.55□□□□□ -0.72
SCLT1-204ENST00000503215 PRR34Q9NV39 138 aa10.55□□□□□ -0.72
SCLT1-204ENST00000503215 TRBV25-1A0A075B6N4 114 aa10.54□□□□□ -0.72
SCLT1-204ENST00000503215 K7EN84 100 aa10.54□□□□□ -0.72
SCLT1-204ENST00000503215 PRSS1P07477 247 aa10.54□□□□□ -0.72
SCLT1-204ENST00000503215 CIRBP-AS1Q8TBR5 109 aa10.54□□□□□ -0.72
SCLT1-204ENST00000503215 GNB1LQ9BYB4 327 aa10.54□□□□□ -0.72
SCLT1-204ENST00000503215 RNASE7Q9H1E1 156 aaKnown RBP10.54□□□□□ -0.72
SCLT1-204ENST00000503215 UQCR10Q9UDW1 63 aa10.54□□□□□ -0.72
SCLT1-204ENST00000503215 IGHV1-24A0A0C4DH33 117 aa10.53□□□□□ -0.72
SCLT1-204ENST00000503215 F2Z2F3 143 aa10.53□□□□□ -0.72
SCLT1-204ENST00000503215 PCP4P48539 62 aa10.53□□□□□ -0.72
SCLT1-204ENST00000503215 MIAQ16674 131 aa10.53□□□□□ -0.72
SCLT1-204ENST00000503215 TMEM97Q5BJF2 176 aa10.53□□□□□ -0.72
SCLT1-204ENST00000503215 OCC1Q8TAD7 63 aa10.53□□□□□ -0.72
SCLT1-204ENST00000503215 GFRA4Q9GZZ7 299 aa10.53□□□□□ -0.72
SCLT1-204ENST00000503215 IGLV4-60A0A075B6I1 120 aa10.52□□□□□ -0.72
SCLT1-204ENST00000503215 PLA2G1BP04054 148 aaKnown RBP10.52□□□□□ -0.72
SCLT1-204ENST00000503215 KRTAP10-4P60372 401 aaPredicted RBP10.52□□□□□ -0.72
SCLT1-204ENST00000503215 RASL11AQ6T310 242 aa10.52□□□□□ -0.72
SCLT1-204ENST00000503215 C20orf203Q8NBC4 194 aa10.52□□□□□ -0.72
SCLT1-204ENST00000503215 IGLV10-54A0A075B6I4 117 aa10.52□□□□□ -0.73
SCLT1-204ENST00000503215 H7C1H1 209 aa10.52□□□□□ -0.73
SCLT1-204ENST00000503215 CTRLP40313 264 aa10.52□□□□□ -0.73
SCLT1-204ENST00000503215 NPSP0C0P6 89 aa10.51□□□□□ -0.73
SCLT1-204ENST00000503215 FOXA3P55318 350 aaPredicted RBP10.51□□□□□ -0.73
SCLT1-204ENST00000503215 PMCHL1Q16048 86 aa10.51□□□□□ -0.73
SCLT1-204ENST00000503215 C14orf177Q52M58 125 aa10.51□□□□□ -0.73
SCLT1-204ENST00000503215 DPH3P1Q9H4G8 78 aa10.51□□□□□ -0.73
SCLT1-204ENST00000503215 TRAV26-2A0A0B4J265 109 aa10.5□□□□□ -0.73
SCLT1-204ENST00000503215 REG3AQ06141 175 aa10.5□□□□□ -0.73
SCLT1-204ENST00000503215 TWIST1Q15672 202 aa10.5□□□□□ -0.73
SCLT1-204ENST00000503215 GTSF1Q8WW33 167 aa10.5□□□□□ -0.73
SCLT1-204ENST00000503215 TMEM243Q9BU79 118 aa10.5□□□□□ -0.73
SCLT1-204ENST00000503215 RPP21Q9H633 154 aaKnown RBP10.5□□□□□ -0.73
SCLT1-204ENST00000503215 COTL1Q14019 142 aa10.49□□□□□ -0.73
SCLT1-204ENST00000503215 GATD1Q8NB37 220 aa10.49□□□□□ -0.73
SCLT1-204ENST00000503215 CNFNQ9BYD5 112 aa10.49□□□□□ -0.73
SCLT1-204ENST00000503215 MRPL18Q9H0U6 180 aaKnown RBP10.49□□□□□ -0.73
SCLT1-204ENST00000503215 PANO1I0J062 215 aa10.48□□□□□ -0.73
SCLT1-204ENST00000503215 BAGE3Q86Y29 109 aa10.48□□□□□ -0.73
SCLT1-204ENST00000503215 J3QL48 77 aa10.47□□□□□ -0.73
SCLT1-204ENST00000503215 SERF1AO75920 110 aa10.47□□□□□ -0.73
SCLT1-204ENST00000503215 PET117Q6UWS5 81 aa10.47□□□□□ -0.73
SCLT1-204ENST00000503215 RPL39LQ96EH5 51 aaKnown RBP10.47□□□□□ -0.73
SCLT1-204ENST00000503215 OSTCQ9NRP0 149 aa10.47□□□□□ -0.73
SCLT1-204ENST00000503215 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.47□□□□□ -0.73
SCLT1-204ENST00000503215 A0A1B0GUV1 79 aa10.46□□□□□ -0.74
SCLT1-204ENST00000503215 NUPR1O60356 82 aa10.46□□□□□ -0.74
SCLT1-204ENST00000503215 UBE2V1Q13404 147 aa10.46□□□□□ -0.74
SCLT1-204ENST00000503215 C9orf163Q8N9P6 203 aa10.46□□□□□ -0.74
SCLT1-204ENST00000503215 PGLYRP4Q96LB8 373 aa10.46□□□□□ -0.74
SCLT1-204ENST00000503215 LAMTOR2Q9Y2Q5 125 aa10.46□□□□□ -0.74
SCLT1-204ENST00000503215 SLPIP03973 132 aa10.45□□□□□ -0.74
SCLT1-204ENST00000503215 IGLC3P0DOY3 106 aa10.45□□□□□ -0.74
SCLT1-204ENST00000503215 AMTP48728 403 aa10.45□□□□□ -0.74
SCLT1-204ENST00000503215 LINC00310P59036 64 aa10.45□□□□□ -0.74
SCLT1-204ENST00000503215 DGAT2L7PQ6IED9 249 aa10.45□□□□□ -0.74
SCLT1-204ENST00000503215 PAM16Q9Y3D7 125 aa10.45□□□□□ -0.74
SCLT1-204ENST00000503215 LRP1Q07954 4544 aaKnown RBP10.45□□□□□ -0.74
SCLT1-204ENST00000503215 HNRNPA3P51991 378 aaKnown RBP10.44□□□□□ -0.74
SCLT1-204ENST00000503215 SDIM1Q6ZPB5 146 aa10.44□□□□□ -0.74
SCLT1-204ENST00000503215 KRTAP29-1A8MX34 341 aaPredicted RBP10.43□□□□□ -0.74
SCLT1-204ENST00000503215 GAS8-AS1O95177 125 aa10.43□□□□□ -0.74
SCLT1-204ENST00000503215 PTTG1IPP53801 180 aa10.43□□□□□ -0.74
SCLT1-204ENST00000503215 SPATA45Q537H7 98 aa10.43□□□□□ -0.74
SCLT1-204ENST00000503215 TRAV8-4A0A0B4J246 113 aa10.42□□□□□ -0.74
SCLT1-204ENST00000503215 hDV102S1A0JD36 115 aa10.42□□□□□ -0.74
SCLT1-204ENST00000503215 UBE2L6O14933 153 aa10.42□□□□□ -0.74
SCLT1-204ENST00000503215 IGKV3OR2-268A0A0C4DH90 116 aa10.41□□□□□ -0.74
SCLT1-204ENST00000503215 PPBPP02775 128 aa10.41□□□□□ -0.74
SCLT1-204ENST00000503215 BORCS7Q96B45 105 aa10.41□□□□□ -0.74
SCLT1-204ENST00000503215 V9GYV3 84 aa10.41□□□□□ -0.74
SCLT1-204ENST00000503215 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.4□□□□□ -0.74
SCLT1-204ENST00000503215 IGKV2-29A2NJV5 120 aaPredicted RBP10.4□□□□□ -0.74
SCLT1-204ENST00000503215 Q6ZN92 141 aa10.4□□□□□ -0.74
SCLT1-204ENST00000503215 FAM231DQ6ZW35 169 aa10.4□□□□□ -0.74
SCLT1-204ENST00000503215 GAGE12HA6NDE8 117 aa10.39□□□□□ -0.75
SCLT1-204ENST00000503215 KRTDAPP60985 99 aa10.39□□□□□ -0.75
SCLT1-204ENST00000503215 CNBPP62633 177 aaKnown RBP10.39□□□□□ -0.75
SCLT1-204ENST00000503215 TMEM136Q6ZRR5 245 aa10.39□□□□□ -0.75
SCLT1-204ENST00000503215 NAT8BQ9UHF3 227 aa10.39□□□□□ -0.75
SCLT1-204ENST00000503215 SMIM27A0A1W2PRY6 76 aa10.39□□□□□ -0.75
SCLT1-204ENST00000503215 FAM231BA6NCW3 169 aa10.39□□□□□ -0.75
SCLT1-204ENST00000503215 A8MWL6 223 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms