RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 ATOH7Q8N100 152 aa5.92□□□□□ -1.46
SF3A1-210ENST00000498259 C15orf53Q8NAA6 179 aa5.92□□□□□ -1.46
SF3A1-210ENST00000498259 AMELXQ99217 191 aa5.92□□□□□ -1.46
SF3A1-210ENST00000498259 MIEN1Q9BRT3 115 aa5.92□□□□□ -1.46
SF3A1-210ENST00000498259 GEMIN7Q9H840 131 aaKnown RBP5.92□□□□□ -1.46
SF3A1-210ENST00000498259 Q9UF83 564 aa5.92□□□□□ -1.46
SF3A1-210ENST00000498259 LOC100131303A0A0U1RQF7 123 aa5.91□□□□□ -1.46
SF3A1-210ENST00000498259 LELP1Q5T871 98 aa5.91□□□□□ -1.46
SF3A1-210ENST00000498259 ZC2HC1BQ5TFG8 222 aa5.91□□□□□ -1.46
SF3A1-210ENST00000498259 NTM-AS1Q6ZSK4 140 aa5.91□□□□□ -1.46
SF3A1-210ENST00000498259 Q6ZTC4 211 aa5.91□□□□□ -1.46
SF3A1-210ENST00000498259 NFE4Q86UQ8 179 aa5.91□□□□□ -1.46
SF3A1-210ENST00000498259 DEFB104AQ8WTQ1 72 aa5.91□□□□□ -1.46
SF3A1-210ENST00000498259 VSIG2Q96IQ7 327 aa5.91□□□□□ -1.46
SF3A1-210ENST00000498259 ANK2Q01484 3957 aa5.91□□□□□ -1.46
SF3A1-210ENST00000498259 PKD1L1Q8TDX9 2849 aa5.91□□□□□ -1.46
SF3A1-210ENST00000498259 NACAE9PAV3 2078 aa5.9□□□□□ -1.46
SF3A1-210ENST00000498259 TINCRA0A1B0GVN0 87 aa5.9□□□□□ -1.46
SF3A1-210ENST00000498259 hDV102S1A0JD36 115 aa5.9□□□□□ -1.46
SF3A1-210ENST00000498259 C11orf86A6NJI1 115 aa5.9□□□□□ -1.46
SF3A1-210ENST00000498259 IGLC3P0DOY3 106 aa5.9□□□□□ -1.46
SF3A1-210ENST00000498259 DDTP30046 118 aa5.9□□□□□ -1.46
SF3A1-210ENST00000498259 HERVK_113P63121 156 aa5.9□□□□□ -1.46
SF3A1-210ENST00000498259 TMEM170BQ5T4T1 132 aa5.9□□□□□ -1.46
SF3A1-210ENST00000498259 SLC25A34Q6PIV7 304 aa5.9□□□□□ -1.46
SF3A1-210ENST00000498259 CDC42SE2Q9NRR3 84 aa5.9□□□□□ -1.46
SF3A1-210ENST00000498259 A0A096LPF7 62 aa5.89□□□□□ -1.47
SF3A1-210ENST00000498259 DLEU1O43261 78 aa5.89□□□□□ -1.47
SF3A1-210ENST00000498259 NANOS2P60321 138 aaKnown RBP5.89□□□□□ -1.47
SF3A1-210ENST00000498259 CDPF1Q6NVV7 123 aa5.89□□□□□ -1.47
SF3A1-210ENST00000498259 CHAC1Q9BUX1 264 aa5.89□□□□□ -1.47
SF3A1-210ENST00000498259 PRO1933Q9H354 126 aa5.89□□□□□ -1.47
SF3A1-210ENST00000498259 NBEAL2Q6ZNJ1 2754 aa5.89□□□□□ -1.47
SF3A1-210ENST00000498259 E9PLD3 99 aa5.88□□□□□ -1.47
SF3A1-210ENST00000498259 SIVA1O15304 175 aa5.88□□□□□ -1.47
SF3A1-210ENST00000498259 COX8AP10176 69 aa5.88□□□□□ -1.47
SF3A1-210ENST00000498259 NMUP48645 174 aa5.88□□□□□ -1.47
SF3A1-210ENST00000498259 HNRNPA3P51991 378 aaKnown RBP5.88□□□□□ -1.47
SF3A1-210ENST00000498259 DEFA6Q01524 100 aa5.88□□□□□ -1.47
SF3A1-210ENST00000498259 GAGE6Q13070 117 aa5.88□□□□□ -1.47
SF3A1-210ENST00000498259 SS18Q15532 418 aa5.88□□□□□ -1.47
SF3A1-210ENST00000498259 STPG4Q8N801 248 aa5.88□□□□□ -1.47
SF3A1-210ENST00000498259 UBE2D1P51668 147 aa5.87□□□□□ -1.47
SF3A1-210ENST00000498259 CEMP1Q6PRD7 247 aaPredicted RBP5.87□□□□□ -1.47
SF3A1-210ENST00000498259 LYPD5Q6UWN5 251 aa5.87□□□□□ -1.47
SF3A1-210ENST00000498259 Q6ZUT4 128 aa5.87□□□□□ -1.47
SF3A1-210ENST00000498259 FAM19A3Q7Z5A8 133 aa5.87□□□□□ -1.47
SF3A1-210ENST00000498259 PLEKHB2Q96CS7 222 aa5.87□□□□□ -1.47
SF3A1-210ENST00000498259 C14orf144Q96I85 54 aa5.87□□□□□ -1.47
SF3A1-210ENST00000498259 OPRPNQ99935 248 aaPredicted RBP5.87□□□□□ -1.47
SF3A1-210ENST00000498259 IGLV4-69A0A075B6H9 119 aa5.86□□□□□ -1.47
SF3A1-210ENST00000498259 A0A0J9YXV3 536 aa5.86□□□□□ -1.47
SF3A1-210ENST00000498259 LGALS3P17931 250 aaKnown RBP5.86□□□□□ -1.47
SF3A1-210ENST00000498259 CCL18P55774 89 aa5.86□□□□□ -1.47
SF3A1-210ENST00000498259 TCTAP57738 103 aa5.86□□□□□ -1.47
SF3A1-210ENST00000498259 RBX1P62877 108 aa5.86□□□□□ -1.47
SF3A1-210ENST00000498259 MAJINQ3KP22 176 aa5.86□□□□□ -1.47
SF3A1-210ENST00000498259 BOD1L2Q8IYS8 172 aa5.86□□□□□ -1.47
SF3A1-210ENST00000498259 LINC00469Q8N7U9 141 aa5.86□□□□□ -1.47
SF3A1-210ENST00000498259 MRPS16Q9Y3D3 137 aaKnown RBP5.86□□□□□ -1.47
SF3A1-210ENST00000498259 TRAV13-1A0A0B4J241 112 aa5.85□□□□□ -1.47
SF3A1-210ENST00000498259 ANGP03950 147 aaKnown RBP5.85□□□□□ -1.47
SF3A1-210ENST00000498259 GCSHP23434 173 aa5.85□□□□□ -1.47
SF3A1-210ENST00000498259 SFTA2Q6UW10 78 aa5.85□□□□□ -1.47
SF3A1-210ENST00000498259 KLK5Q9Y337 293 aaPredicted RBP5.85□□□□□ -1.47
SF3A1-210ENST00000498259 MGAM2Q2M2H8 2515 aa5.84□□□□□ -1.47
SF3A1-210ENST00000498259 IGLV5-45A0A087WSX0 123 aa5.84□□□□□ -1.47
SF3A1-210ENST00000498259 TRAV8-4A0A0B4J246 113 aa5.84□□□□□ -1.47
SF3A1-210ENST00000498259 MYMXA0A1B0GTQ4 84 aa5.84□□□□□ -1.47
SF3A1-210ENST00000498259 TMEM223A0PJW6 202 aa5.84□□□□□ -1.47
SF3A1-210ENST00000498259 NUPR2A6NF83 97 aa5.84□□□□□ -1.47
SF3A1-210ENST00000498259 K7EP13 123 aa5.84□□□□□ -1.47
SF3A1-210ENST00000498259 M0R143 59 aa5.84□□□□□ -1.47
SF3A1-210ENST00000498259 LEPROTO15243 131 aa5.84□□□□□ -1.47
SF3A1-210ENST00000498259 CRPP02741 224 aa5.84□□□□□ -1.47
SF3A1-210ENST00000498259 ZNF22P17026 224 aaPredicted RBP5.84□□□□□ -1.47
SF3A1-210ENST00000498259 LBHQ53QV2 105 aaPredicted RBP5.84□□□□□ -1.47
SF3A1-210ENST00000498259 ANKRD39Q53RE8 183 aa5.84□□□□□ -1.47
SF3A1-210ENST00000498259 IGHV1-58A0A0C4DH39 117 aa5.83□□□□□ -1.48
SF3A1-210ENST00000498259 LINC00587B1AMM8 73 aa5.83□□□□□ -1.48
SF3A1-210ENST00000498259 J3QQQ9 107 aa5.83□□□□□ -1.48
SF3A1-210ENST00000498259 MPV17L2Q567V2 206 aa5.83□□□□□ -1.48
SF3A1-210ENST00000498259 RNASE13Q5GAN3 156 aaKnown RBP5.83□□□□□ -1.48
SF3A1-210ENST00000498259 LINC00242Q5T6M2 205 aa5.83□□□□□ -1.48
SF3A1-210ENST00000498259 SCGB1D4Q6XE38 83 aa5.83□□□□□ -1.48
SF3A1-210ENST00000498259 LINC01561Q8N1V8 128 aa5.83□□□□□ -1.48
SF3A1-210ENST00000498259 HIGD1BQ9P298 99 aa5.83□□□□□ -1.48
SF3A1-210ENST00000498259 IGLV4-60A0A075B6I1 120 aa5.82□□□□□ -1.48
SF3A1-210ENST00000498259 LINC00959A0A1B0GUT2 108 aa5.82□□□□□ -1.48
SF3A1-210ENST00000498259 ZNF815PA8K554 130 aa5.82□□□□□ -1.48
SF3A1-210ENST00000498259 IGLL5B9A064 214 aa5.82□□□□□ -1.48
SF3A1-210ENST00000498259 REG3AQ06141 175 aa5.82□□□□□ -1.48
SF3A1-210ENST00000498259 CIRBPQ14011 172 aaKnown RBP5.82□□□□□ -1.48
SF3A1-210ENST00000498259 C4orf48Q5BLP8 95 aa5.82□□□□□ -1.48
SF3A1-210ENST00000498259 LINC00269Q8N2A0 174 aa5.82□□□□□ -1.48
SF3A1-210ENST00000498259 COPS9Q8WXC6 57 aa5.82□□□□□ -1.48
SF3A1-210ENST00000498259 FAM104AQ969W3 186 aa5.82□□□□□ -1.48
SF3A1-210ENST00000498259 NOTCH1P46531 2555 aa5.82□□□□□ -1.48
SF3A1-210ENST00000498259 CMYA5Q8N3K9 4069 aa5.82□□□□□ -1.48
SF3A1-210ENST00000498259 NBEAL1Q6ZS30 2694 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms