RNA–Protein interactions for RNA: ENST00000498187.6

NKX2-1-202, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 2,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-202ENST00000498187 Q8N2B8 174 aa14.3□□□□□ -0.12
NKX2-1-202ENST00000498187 PLA2G2AP14555 144 aa14.29□□□□□ -0.12
NKX2-1-202ENST00000498187 GAGE5Q13069 117 aa14.29□□□□□ -0.12
NKX2-1-202ENST00000498187 GAGE6Q13070 117 aa14.29□□□□□ -0.12
NKX2-1-202ENST00000498187 PTPN13Q12923 2485 aa14.29□□□□□ -0.12
NKX2-1-202ENST00000498187 LINC01587Q99440 93 aa14.29□□□□□ -0.12
NKX2-1-202ENST00000498187 ABCA12Q86UK0 2595 aa14.28□□□□□ -0.12
NKX2-1-202ENST00000498187 CRLF1O75462 422 aa14.28□□□□□ -0.12
NKX2-1-202ENST00000498187 KRTAP10-9P60411 292 aa14.28□□□□□ -0.12
NKX2-1-202ENST00000498187 HIST2H2BDQ6DRA6 164 aa14.28□□□□□ -0.12
NKX2-1-202ENST00000498187 DYNLRB2Q8TF09 96 aa14.28□□□□□ -0.12
NKX2-1-202ENST00000498187 C4orf3Q8WVX3 66 aa14.28□□□□□ -0.12
NKX2-1-202ENST00000498187 MXRA5Q9NR99 2828 aa14.28□□□□□ -0.12
NKX2-1-202ENST00000498187 TTC32Q5I0X7 151 aa14.27□□□□□ -0.12
NKX2-1-202ENST00000498187 GCN1Q92616 2671 aaKnown RBP14.27□□□□□ -0.12
NKX2-1-202ENST00000498187 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.27□□□□□ -0.13
NKX2-1-202ENST00000498187 IGKV2-29A2NJV5 120 aaPredicted RBP14.27□□□□□ -0.13
NKX2-1-202ENST00000498187 A8MZ25 164 aa14.27□□□□□ -0.13
NKX2-1-202ENST00000498187 NDUFV3P56181 108 aaKnown RBP14.27□□□□□ -0.13
NKX2-1-202ENST00000498187 NPC2P61916 151 aa14.27□□□□□ -0.13
NKX2-1-202ENST00000498187 C11orf72Q8NBR9 251 aa14.27□□□□□ -0.13
NKX2-1-202ENST00000498187 DNAJC30Q96LL9 226 aa14.27□□□□□ -0.13
NKX2-1-202ENST00000498187 LST1O00453 97 aa14.26□□□□□ -0.13
NKX2-1-202ENST00000498187 NHLRC4P0CG21 123 aaPredicted RBP14.26□□□□□ -0.13
NKX2-1-202ENST00000498187 PRRC2AP48634 2157 aaKnown RBP14.26□□□□□ -0.13
NKX2-1-202ENST00000498187 DEFB113Q30KQ7 82 aa14.25□□□□□ -0.13
NKX2-1-202ENST00000498187 C15orf53Q8NAA6 179 aa14.25□□□□□ -0.13
NKX2-1-202ENST00000498187 LINC00467Q9BRT7 94 aa14.25□□□□□ -0.13
NKX2-1-202ENST00000498187 IGHV3-38A0A0C4DH36 116 aa14.25□□□□□ -0.13
NKX2-1-202ENST00000498187 SHISA2Q6UWI4 295 aa14.25□□□□□ -0.13
NKX2-1-202ENST00000498187 TIRAPP58753 221 aa14.24□□□□□ -0.13
NKX2-1-202ENST00000498187 CIRBPQ14011 172 aaKnown RBP14.24□□□□□ -0.13
NKX2-1-202ENST00000498187 MRPL23Q16540 153 aaKnown RBP14.24□□□□□ -0.13
NKX2-1-202ENST00000498187 DEFB114Q30KQ6 69 aa14.24□□□□□ -0.13
NKX2-1-202ENST00000498187 Q6ZSV7 163 aa14.24□□□□□ -0.13
NKX2-1-202ENST00000498187 CLEC2BQ92478 149 aa14.24□□□□□ -0.13
NKX2-1-202ENST00000498187 INSP01308 110 aa14.24□□□□□ -0.13
NKX2-1-202ENST00000498187 IGHV3-53P01767 116 aa14.24□□□□□ -0.13
NKX2-1-202ENST00000498187 J3QKU1 62 aa14.23□□□□□ -0.13
NKX2-1-202ENST00000498187 NDUFA1O15239 70 aa14.23□□□□□ -0.13
NKX2-1-202ENST00000498187 CDKN2A-AS1Q9UH64 79 aa14.23□□□□□ -0.13
NKX2-1-202ENST00000498187 IGLV5-45A0A087WSX0 123 aa14.22□□□□□ -0.13
NKX2-1-202ENST00000498187 FAM240AA0A1B0GVK7 77 aa14.22□□□□□ -0.13
NKX2-1-202ENST00000498187 FASNP49327 2511 aaKnown RBP14.22□□□□□ -0.13
NKX2-1-202ENST00000498187 BEAN1Q3B7T3 259 aa14.21□□□□□ -0.13
NKX2-1-202ENST00000498187 DEFB121Q5J5C9 76 aa14.21□□□□□ -0.13
NKX2-1-202ENST00000498187 DGAT2L7PQ6IED9 249 aa14.21□□□□□ -0.13
NKX2-1-202ENST00000498187 TMEM101Q96IK0 257 aa14.21□□□□□ -0.13
NKX2-1-202ENST00000498187 Q96MF0 132 aa14.21□□□□□ -0.13
NKX2-1-202ENST00000498187 RS1O15537 224 aa14.2□□□□□ -0.14
NKX2-1-202ENST00000498187 XCL2Q9UBD3 114 aa14.2□□□□□ -0.14
NKX2-1-202ENST00000498187 GAGE12JA6NER3 117 aa14.19□□□□□ -0.14
NKX2-1-202ENST00000498187 GAGE7O76087 117 aa14.19□□□□□ -0.14
NKX2-1-202ENST00000498187 GAGE12FP0CL80 117 aa14.19□□□□□ -0.14
NKX2-1-202ENST00000498187 GAGE12GP0CL81 117 aa14.19□□□□□ -0.14
NKX2-1-202ENST00000498187 GAGE12IP0CL82 117 aa14.19□□□□□ -0.14
NKX2-1-202ENST00000498187 GAGE4Q13068 117 aa14.19□□□□□ -0.14
NKX2-1-202ENST00000498187 DAND5Q8N907 189 aa14.19□□□□□ -0.14
NKX2-1-202ENST00000498187 B5MCH6 92 aa14.19□□□□□ -0.14
NKX2-1-202ENST00000498187 HIST2H2BCQ6DN03 193 aa14.19□□□□□ -0.14
NKX2-1-202ENST00000498187 APCP25054 2843 aa14.18□□□□□ -0.14
NKX2-1-202ENST00000498187 HERVK_113P63121 156 aa14.18□□□□□ -0.14
NKX2-1-202ENST00000498187 COPS9Q8WXC6 57 aa14.18□□□□□ -0.14
NKX2-1-202ENST00000498187 TEX15Q9BXT5 2789 aa14.18□□□□□ -0.14
NKX2-1-202ENST00000498187 ODF3L2Q3SX64 289 aa14.17□□□□□ -0.14
NKX2-1-202ENST00000498187 SS18L2Q9UHA2 77 aa14.17□□□□□ -0.14
NKX2-1-202ENST00000498187 IGHV3OR16-12A0A075B7B8 117 aa14.16□□□□□ -0.14
NKX2-1-202ENST00000498187 LINC00308Q8TCZ7 52 aa14.16□□□□□ -0.14
NKX2-1-202ENST00000498187 CITED2Q99967 270 aaPredicted RBP14.16□□□□□ -0.14
NKX2-1-202ENST00000498187 MYO9AB2RTY4 2548 aa14.16□□□□□ -0.14
NKX2-1-202ENST00000498187 IGLV5-39A0A0G2JS06 123 aa14.15□□□□□ -0.14
NKX2-1-202ENST00000498187 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.15□□□□□ -0.14
NKX2-1-202ENST00000498187 Q9H8V8 135 aa14.15□□□□□ -0.14
NKX2-1-202ENST00000498187 NAV2Q8IVL1 2488 aa14.15□□□□□ -0.14
NKX2-1-202ENST00000498187 COX6A2Q02221 97 aa14.14□□□□□ -0.15
NKX2-1-202ENST00000498187 STHQ8IWL8 128 aa14.14□□□□□ -0.15
NKX2-1-202ENST00000498187 C1orf158Q8N1D5 194 aa14.14□□□□□ -0.15
NKX2-1-202ENST00000498187 C11orf44Q8N8P7 122 aa14.13□□□□□ -0.15
NKX2-1-202ENST00000498187 TRGV1A0A0A0MS02 117 aa14.13□□□□□ -0.15
NKX2-1-202ENST00000498187 LINC00242Q5T6M2 205 aa14.13□□□□□ -0.15
NKX2-1-202ENST00000498187 A0A1W2PRX2 142 aa14.12□□□□□ -0.15
NKX2-1-202ENST00000498187 COX7A2LO14548 114 aa14.12□□□□□ -0.15
NKX2-1-202ENST00000498187 CCDC179H3BU77 68 aa14.12□□□□□ -0.15
NKX2-1-202ENST00000498187 FAM19A3Q7Z5A8 133 aa14.12□□□□□ -0.15
NKX2-1-202ENST00000498187 KRTAP1-3Q8IUG1 177 aa14.12□□□□□ -0.15
NKX2-1-202ENST00000498187 HECTD1Q9ULT8 2610 aa14.11□□□□□ -0.15
NKX2-1-202ENST00000498187 ACYP1P07311 99 aa14.11□□□□□ -0.15
NKX2-1-202ENST00000498187 TMEM86BQ8N661 226 aa14.11□□□□□ -0.15
NKX2-1-202ENST00000498187 IL17DQ8TAD2 202 aa14.11□□□□□ -0.15
NKX2-1-202ENST00000498187 TRAV25A0A0B4J276 109 aa14.1□□□□□ -0.15
NKX2-1-202ENST00000498187 ZNF625Q96I27 306 aaPredicted RBP14.1□□□□□ -0.15
NKX2-1-202ENST00000498187 CSDC2Q9Y534 153 aaKnown RBP14.09□□□□□ -0.15
NKX2-1-202ENST00000498187 LINC00694P0DN24 101 aa14.09□□□□□ -0.15
NKX2-1-202ENST00000498187 ITPR2Q14571 2701 aa14.09□□□□□ -0.15
NKX2-1-202ENST00000498187 WNK1Q9H4A3 2382 aa14.08□□□□□ -0.15
NKX2-1-202ENST00000498187 DNAJC9-AS1A6NH13 148 aa14.08□□□□□ -0.16
NKX2-1-202ENST00000498187 SMIM1B2RUZ4 78 aa14.08□□□□□ -0.16
NKX2-1-202ENST00000498187 TRBV7-7A0A0K0K1E9 115 aa14.08□□□□□ -0.16
NKX2-1-202ENST00000498187 A0A0U1RRA0 63 aa14.08□□□□□ -0.16
NKX2-1-202ENST00000498187 MEIG1Q5JSS6 88 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms