RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 ABCA1O95477 2261 aa0.48□□□□□ -2.33
VPS26A-208ENST00000497022 KDM3BQ7LBC6 1761 aa0.48□□□□□ -2.33
VPS26A-208ENST00000497022 TRBV7-1A0A0A6YYK4 115 aa0.48□□□□□ -2.33
VPS26A-208ENST00000497022 H3BQ15 152 aa0.48□□□□□ -2.33
VPS26A-208ENST00000497022 SNCGO76070 127 aa0.48□□□□□ -2.33
VPS26A-208ENST00000497022 SIX6O95475 246 aa0.48□□□□□ -2.33
VPS26A-208ENST00000497022 CCL3L1P16619 93 aa0.48□□□□□ -2.33
VPS26A-208ENST00000497022 CAV3P56539 151 aa0.48□□□□□ -2.33
VPS26A-208ENST00000497022 ELOF1P60002 83 aaKnown RBP0.48□□□□□ -2.33
VPS26A-208ENST00000497022 C20orf197Q8N268 126 aa0.48□□□□□ -2.33
VPS26A-208ENST00000497022 MYOZ3Q8TDC0 251 aa0.48□□□□□ -2.33
VPS26A-208ENST00000497022 PMCHL2Q9BQD1 86 aa0.48□□□□□ -2.33
VPS26A-208ENST00000497022 PROK2Q9HC23 129 aa0.48□□□□□ -2.33
VPS26A-208ENST00000497022 CDC42SE2Q9NRR3 84 aa0.48□□□□□ -2.33
VPS26A-208ENST00000497022 NEXMIFQ5QGS0 1516 aa0.48□□□□□ -2.33
VPS26A-208ENST00000497022 MLH3Q9UHC1 1453 aa0.48□□□□□ -2.33
VPS26A-208ENST00000497022 LTN1O94822 1766 aa0.47□□□□□ -2.33
VPS26A-208ENST00000497022 MEGF8Q7Z7M0 2845 aa0.47□□□□□ -2.33
VPS26A-208ENST00000497022 DOCK11Q5JSL3 2073 aa0.47□□□□□ -2.33
VPS26A-208ENST00000497022 ITSN1Q15811 1721 aa0.47□□□□□ -2.33
VPS26A-208ENST00000497022 NUP188Q5SRE5 1749 aa0.47□□□□□ -2.33
VPS26A-208ENST00000497022 CLTCQ00610 1675 aaKnown RBP0.47□□□□□ -2.33
VPS26A-208ENST00000497022 KIF21AQ7Z4S6 1674 aa0.47□□□□□ -2.33
VPS26A-208ENST00000497022 LRRC37A3O60309 1634 aa0.47□□□□□ -2.33
VPS26A-208ENST00000497022 A0A0G2JND7 137 aa0.47□□□□□ -2.33
VPS26A-208ENST00000497022 K7EIL1 84 aa0.47□□□□□ -2.33
VPS26A-208ENST00000497022 LY6G6CO95867 125 aa0.47□□□□□ -2.33
VPS26A-208ENST00000497022 APOC3P02656 99 aa0.47□□□□□ -2.33
VPS26A-208ENST00000497022 TRAPPC2P0DI81 140 aa0.47□□□□□ -2.33
VPS26A-208ENST00000497022 TRAPPC2BP0DI82 140 aa0.47□□□□□ -2.33
VPS26A-208ENST00000497022 PIPP12273 146 aaPredicted RBP0.47□□□□□ -2.33
VPS26A-208ENST00000497022 CCL18P55774 89 aa0.47□□□□□ -2.33
VPS26A-208ENST00000497022 GNG11P61952 73 aa0.47□□□□□ -2.33
VPS26A-208ENST00000497022 CCL8P80075 99 aa0.47□□□□□ -2.33
VPS26A-208ENST00000497022 ZNF56Q15929 161 aa0.47□□□□□ -2.33
VPS26A-208ENST00000497022 Q5BKY6 102 aa0.47□□□□□ -2.33
VPS26A-208ENST00000497022 C12orf73Q69YU5 71 aa0.47□□□□□ -2.33
VPS26A-208ENST00000497022 C10orf99Q6UWK7 81 aa0.47□□□□□ -2.33
VPS26A-208ENST00000497022 VMO1Q7Z5L0 202 aa0.47□□□□□ -2.33
VPS26A-208ENST00000497022 PLAC4Q8WY50 150 aa0.47□□□□□ -2.33
VPS26A-208ENST00000497022 AQP10Q96PS8 301 aa0.47□□□□□ -2.33
VPS26A-208ENST00000497022 AMELXQ99217 191 aa0.47□□□□□ -2.33
VPS26A-208ENST00000497022 DPY30Q9C005 99 aa0.47□□□□□ -2.33
VPS26A-208ENST00000497022 LINC00472Q9H8W2 130 aa0.47□□□□□ -2.33
VPS26A-208ENST00000497022 CACFD1Q9UGQ2 172 aa0.47□□□□□ -2.33
VPS26A-208ENST00000497022 BTAF1O14981 1849 aa0.47□□□□□ -2.33
VPS26A-208ENST00000497022 NSD3Q9BZ95 1437 aa0.47□□□□□ -2.33
VPS26A-208ENST00000497022 RRBP1Q9P2E9 1410 aaKnown RBP0.47□□□□□ -2.33
VPS26A-208ENST00000497022 MAP3K4Q9Y6R4 1608 aa0.46□□□□□ -2.34
VPS26A-208ENST00000497022 FRAS1Q86XX4 4008 aa0.46□□□□□ -2.34
VPS26A-208ENST00000497022 UNC13BO14795 1591 aa0.46□□□□□ -2.34
VPS26A-208ENST00000497022 TRBV7-3A0A075B6L6 115 aa0.46□□□□□ -2.34
VPS26A-208ENST00000497022 A0A096LNT2 108 aa0.46□□□□□ -2.34
VPS26A-208ENST00000497022 IGLC7A0M8Q6 106 aa0.46□□□□□ -2.34
VPS26A-208ENST00000497022 FAM24AA6NFZ4 105 aa0.46□□□□□ -2.34
VPS26A-208ENST00000497022 G3V318 75 aa0.46□□□□□ -2.34
VPS26A-208ENST00000497022 SYS1-DBNDD2H3BUS1 97 aa0.46□□□□□ -2.34
VPS26A-208ENST00000497022 HMGN4O00479 90 aa0.46□□□□□ -2.34
VPS26A-208ENST00000497022 SSSCA1O60232 199 aa0.46□□□□□ -2.34
VPS26A-208ENST00000497022 SFT2D2O95562 160 aa0.46□□□□□ -2.34
VPS26A-208ENST00000497022 ZNF137PP52743 207 aa0.46□□□□□ -2.34
VPS26A-208ENST00000497022 ATP5EP56381 51 aaPredicted RBP0.46□□□□□ -2.34
VPS26A-208ENST00000497022 SEC11AP67812 179 aa0.46□□□□□ -2.34
VPS26A-208ENST00000497022 DCDP81605 110 aaKnown RBP0.46□□□□□ -2.34
VPS26A-208ENST00000497022 ALKAL2Q6UX46 152 aa0.46□□□□□ -2.34
VPS26A-208ENST00000497022 NDUFA11Q86Y39 141 aa0.46□□□□□ -2.34
VPS26A-208ENST00000497022 FDCSPQ8NFU4 85 aa0.46□□□□□ -2.34
VPS26A-208ENST00000497022 LCN9Q8WX39 176 aa0.46□□□□□ -2.34
VPS26A-208ENST00000497022 FAM167A-AS1Q96KT0 104 aa0.46□□□□□ -2.34
VPS26A-208ENST00000497022 SCP2D1Q9UJQ7 156 aa0.46□□□□□ -2.34
VPS26A-208ENST00000497022 V9GYS6 101 aa0.46□□□□□ -2.34
VPS26A-208ENST00000497022 PAPPA2Q9BXP8 1791 aa0.46□□□□□ -2.34
VPS26A-208ENST00000497022 ARFGEF2Q9Y6D5 1785 aa0.46□□□□□ -2.34
VPS26A-208ENST00000497022 RGPD1P0DJD0 1748 aa0.46□□□□□ -2.34
VPS26A-208ENST00000497022 MYO5CQ9NQX4 1742 aa0.46□□□□□ -2.34
VPS26A-208ENST00000497022 ZC3H13Q5T200 1668 aaKnown RBP0.46□□□□□ -2.34
VPS26A-208ENST00000497022 EDC4Q6P2E9 1401 aaKnown RBP0.46□□□□□ -2.34
VPS26A-208ENST00000497022 USP32Q8NFA0 1604 aa0.46□□□□□ -2.34
VPS26A-208ENST00000497022 CFAP74Q9C0B2 1584 aa0.45□□□□□ -2.34
VPS26A-208ENST00000497022 SLIT1O75093 1534 aa0.45□□□□□ -2.34
VPS26A-208ENST00000497022 CUX1P39880 1505 aa0.45□□□□□ -2.34
VPS26A-208ENST00000497022 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.45□□□□□ -2.34
VPS26A-208ENST00000497022 CRYM-AS1A6NIL9 109 aa0.45□□□□□ -2.34
VPS26A-208ENST00000497022 FAM223BA6NKX1 122 aa0.45□□□□□ -2.34
VPS26A-208ENST00000497022 CHKB-CPT1BH3BT56 60 aa0.45□□□□□ -2.34
VPS26A-208ENST00000497022 EDDM3BP56851 147 aa0.45□□□□□ -2.34
VPS26A-208ENST00000497022 WFDC2Q14508 124 aa0.45□□□□□ -2.34
VPS26A-208ENST00000497022 SPINK9Q5DT21 86 aa0.45□□□□□ -2.34
VPS26A-208ENST00000497022 C10orf128Q5T292 105 aa0.45□□□□□ -2.34
VPS26A-208ENST00000497022 ZNF818PQ6ZRF7 136 aa0.45□□□□□ -2.34
VPS26A-208ENST00000497022 CYP2G1PQ6ZSU1 146 aa0.45□□□□□ -2.34
VPS26A-208ENST00000497022 SERP2Q8N6R1 65 aa0.45□□□□□ -2.34
VPS26A-208ENST00000497022 COPS9Q8WXC6 57 aa0.45□□□□□ -2.34
VPS26A-208ENST00000497022 PLAC8Q9NZF1 115 aa0.45□□□□□ -2.34
VPS26A-208ENST00000497022 FANCAO15360 1455 aa0.45□□□□□ -2.34
VPS26A-208ENST00000497022 KIF1AQ12756 1690 aa0.45□□□□□ -2.34
VPS26A-208ENST00000497022 TARBP1Q13395 1621 aaKnown RBP0.45□□□□□ -2.34
VPS26A-208ENST00000497022 JMJD1CQ15652 2540 aa0.44□□□□□ -2.34
VPS26A-208ENST00000497022 MYO7BQ6PIF6 2116 aa0.44□□□□□ -2.34
VPS26A-208ENST00000497022 F5P12259 2224 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms