RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 C6orf52Q5T4I8 152 aa1.35□□□□□ -2.19
CLK1-214ENST00000496205 ZNF720Q7Z2F6 126 aa1.35□□□□□ -2.19
CLK1-214ENST00000496205 Q86TA4 180 aa1.35□□□□□ -2.19
CLK1-214ENST00000496205 FAM167A-AS1Q96KT0 104 aa1.35□□□□□ -2.19
CLK1-214ENST00000496205 MGST2Q99735 147 aa1.35□□□□□ -2.19
CLK1-214ENST00000496205 LENEPQ9Y5L5 61 aa1.35□□□□□ -2.19
CLK1-214ENST00000496205 E9PCH4 1651 aa1.35□□□□□ -2.19
CLK1-214ENST00000496205 GOLGB1Q14789 3259 aaKnown RBP1.35□□□□□ -2.19
CLK1-214ENST00000496205 SORL1Q92673 2214 aa1.35□□□□□ -2.19
CLK1-214ENST00000496205 PLXNA1Q9UIW2 1896 aa1.35□□□□□ -2.19
CLK1-214ENST00000496205 ARHGEF12Q9NZN5 1544 aa1.35□□□□□ -2.19
CLK1-214ENST00000496205 MON2Q7Z3U7 1717 aa1.35□□□□□ -2.19
CLK1-214ENST00000496205 FBN3Q75N90 2809 aa1.34□□□□□ -2.19
CLK1-214ENST00000496205 UGGT1Q9NYU2 1555 aa1.34□□□□□ -2.19
CLK1-214ENST00000496205 DIP2CQ9Y2E4 1556 aa1.34□□□□□ -2.19
CLK1-214ENST00000496205 HFM1A2PYH4 1435 aa1.34□□□□□ -2.19
CLK1-214ENST00000496205 ABCC5O15440 1437 aa1.34□□□□□ -2.19
CLK1-214ENST00000496205 MYO3AQ8NEV4 1616 aa1.34□□□□□ -2.19
CLK1-214ENST00000496205 TRBV7-3A0A075B6L6 115 aa1.34□□□□□ -2.19
CLK1-214ENST00000496205 LOC285095A0A1B0GVY8 99 aa1.34□□□□□ -2.19
CLK1-214ENST00000496205 IGLC1P0CG04 106 aa1.34□□□□□ -2.19
CLK1-214ENST00000496205 ASIPP42127 132 aa1.34□□□□□ -2.19
CLK1-214ENST00000496205 ALKAL2Q6UX46 152 aa1.34□□□□□ -2.19
CLK1-214ENST00000496205 V9GYV3 84 aa1.34□□□□□ -2.19
CLK1-214ENST00000496205 C3P01024 1663 aa1.34□□□□□ -2.19
CLK1-214ENST00000496205 PREX1Q8TCU6 1659 aa1.34□□□□□ -2.19
CLK1-214ENST00000496205 UBR1Q8IWV7 1749 aa1.34□□□□□ -2.2
CLK1-214ENST00000496205 DUOX2Q9NRD8 1548 aa1.34□□□□□ -2.2
CLK1-214ENST00000496205 SRCAPQ6ZRS2 3230 aa1.34□□□□□ -2.2
CLK1-214ENST00000496205 ANKRD36BQ8N2N9 1353 aa1.34□□□□□ -2.2
CLK1-214ENST00000496205 KIAA0100Q14667 2235 aaKnown RBP1.34□□□□□ -2.2
CLK1-214ENST00000496205 AFDNP55196 1824 aaKnown RBP1.33□□□□□ -2.2
CLK1-214ENST00000496205 DOCK2Q92608 1830 aa1.33□□□□□ -2.2
CLK1-214ENST00000496205 KIF20BQ96Q89 1820 aa1.33□□□□□ -2.2
CLK1-214ENST00000496205 NRXN1Q9ULB1 1477 aa1.33□□□□□ -2.2
CLK1-214ENST00000496205 CRYBG1Q9Y4K1 1723 aa1.33□□□□□ -2.2
CLK1-214ENST00000496205 CLPSL1A2RUU4 121 aa1.33□□□□□ -2.2
CLK1-214ENST00000496205 NCR3O14931 201 aa1.33□□□□□ -2.2
CLK1-214ENST00000496205 PEA15Q15121 130 aa1.33□□□□□ -2.2
CLK1-214ENST00000496205 KRTAP21-3Q3LHN1 58 aa1.33□□□□□ -2.2
CLK1-214ENST00000496205 Q5BKY6 102 aa1.33□□□□□ -2.2
CLK1-214ENST00000496205 LCN9Q8WX39 176 aa1.33□□□□□ -2.2
CLK1-214ENST00000496205 CCL19Q99731 98 aa1.33□□□□□ -2.2
CLK1-214ENST00000496205 TMEM14BQ9NUH8 114 aa1.33□□□□□ -2.2
CLK1-214ENST00000496205 UQCR10Q9UDW1 63 aa1.33□□□□□ -2.2
CLK1-214ENST00000496205 ATP7AQ04656 1500 aa1.33□□□□□ -2.2
CLK1-214ENST00000496205 TCHHQ07283 1943 aa1.32□□□□□ -2.2
CLK1-214ENST00000496205 CLTCQ00610 1675 aaKnown RBP1.32□□□□□ -2.2
CLK1-214ENST00000496205 PRRC2BQ5JSZ5 2229 aaKnown RBP1.32□□□□□ -2.2
CLK1-214ENST00000496205 FANCAO15360 1455 aa1.32□□□□□ -2.2
CLK1-214ENST00000496205 CCDC141Q6ZP82 1450 aa1.32□□□□□ -2.2
CLK1-214ENST00000496205 ABCC3O15438 1527 aa1.32□□□□□ -2.2
CLK1-214ENST00000496205 SLIT1O75093 1534 aa1.32□□□□□ -2.2
CLK1-214ENST00000496205 TRPM2O94759 1503 aa1.32□□□□□ -2.2
CLK1-214ENST00000496205 CDK13Q14004 1512 aaKnown RBP1.32□□□□□ -2.2
CLK1-214ENST00000496205 TRBV30A0A0K0K1B3 111 aa1.32□□□□□ -2.2
CLK1-214ENST00000496205 FXYD1O00168 92 aa1.32□□□□□ -2.2
CLK1-214ENST00000496205 ATOX1O00244 68 aa1.32□□□□□ -2.2
CLK1-214ENST00000496205 GNGT2O14610 69 aa1.32□□□□□ -2.2
CLK1-214ENST00000496205 GYPAP02724 150 aa1.32□□□□□ -2.2
CLK1-214ENST00000496205 NMBP08949 121 aa1.32□□□□□ -2.2
CLK1-214ENST00000496205 EDDM3BP56851 147 aa1.32□□□□□ -2.2
CLK1-214ENST00000496205 DEFA5Q01523 94 aa1.32□□□□□ -2.2
CLK1-214ENST00000496205 LINC00208Q96KT6 92 aa1.32□□□□□ -2.2
CLK1-214ENST00000496205 AMELXQ99217 191 aa1.32□□□□□ -2.2
CLK1-214ENST00000496205 NPVFQ9HCQ7 196 aa1.32□□□□□ -2.2
CLK1-214ENST00000496205 DYNLRB1Q9NP97 96 aa1.32□□□□□ -2.2
CLK1-214ENST00000496205 LINC00474Q9P2X8 69 aa1.32□□□□□ -2.2
CLK1-214ENST00000496205 SETBP1Q9Y6X0 1596 aa1.32□□□□□ -2.2
CLK1-214ENST00000496205 NRXN3Q9Y4C0 1643 aa1.32□□□□□ -2.2
CLK1-214ENST00000496205 IQGAP1P46940 1657 aa1.32□□□□□ -2.2
CLK1-214ENST00000496205 SNRNP200O75643 2136 aaKnown RBP1.31□□□□□ -2.2
CLK1-214ENST00000496205 TET1Q8NFU7 2136 aa1.31□□□□□ -2.2
CLK1-214ENST00000496205 LRRC7Q96NW7 1537 aa1.31□□□□□ -2.2
CLK1-214ENST00000496205 SYCP2Q9BX26 1530 aa1.31□□□□□ -2.2
CLK1-214ENST00000496205 DIP2AQ14689 1571 aa1.31□□□□□ -2.2
CLK1-214ENST00000496205 NWD1Q149M9 1564 aa1.31□□□□□ -2.2
CLK1-214ENST00000496205 DLG5Q8TDM6 1919 aa1.31□□□□□ -2.2
CLK1-214ENST00000496205 CRYM-AS1A6NIL9 109 aa1.31□□□□□ -2.2
CLK1-214ENST00000496205 APOC3P02656 99 aa1.31□□□□□ -2.2
CLK1-214ENST00000496205 PRB1P04280 392 aa1.31□□□□□ -2.2
CLK1-214ENST00000496205 COX6CP09669 75 aa1.31□□□□□ -2.2
CLK1-214ENST00000496205 TDRG1Q3Y452 100 aa1.31□□□□□ -2.2
CLK1-214ENST00000496205 PMCHL2Q9BQD1 86 aa1.31□□□□□ -2.2
CLK1-214ENST00000496205 R4GMQ9 66 aa1.31□□□□□ -2.2
CLK1-214ENST00000496205 XRN1Q8IZH2 1706 aaKnown RBP1.31□□□□□ -2.2
CLK1-214ENST00000496205 MARF1Q9Y4F3 1742 aaKnown RBP1.31□□□□□ -2.2
CLK1-214ENST00000496205 LTN1O94822 1766 aa1.31□□□□□ -2.2
CLK1-214ENST00000496205 MED12Q93074 2177 aa1.31□□□□□ -2.2
CLK1-214ENST00000496205 SBF2Q86WG5 1849 aa1.31□□□□□ -2.2
CLK1-214ENST00000496205 TANC1Q9C0D5 1861 aa1.31□□□□□ -2.2
CLK1-214ENST00000496205 ERVK-7P63135 1459 aa1.31□□□□□ -2.2
CLK1-214ENST00000496205 IQSEC2Q5JU85 1478 aa1.31□□□□□ -2.2
CLK1-214ENST00000496205 USP32Q8NFA0 1604 aa1.3□□□□□ -2.2
CLK1-214ENST00000496205 ITSN1Q15811 1721 aa1.3□□□□□ -2.2
CLK1-214ENST00000496205 RGPD3A6NKT7 1758 aaPredicted RBP1.3□□□□□ -2.2
CLK1-214ENST00000496205 RGPD4Q7Z3J3 1758 aa1.3□□□□□ -2.2
CLK1-214ENST00000496205 hADV29S1A0JD25 119 aa1.3□□□□□ -2.2
CLK1-214ENST00000496205 K7EP34 96 aa1.3□□□□□ -2.2
CLK1-214ENST00000496205 PPP1R17O96001 155 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms