RNA–Protein interactions for RNA: ENST00000494675.5

LRIF1-203, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-203ENST00000494675 COL4A1P02462 1669 aa0.92□□□□□ -2.26
LRIF1-203ENST00000494675 CLTCQ00610 1675 aaKnown RBP0.92□□□□□ -2.26
LRIF1-203ENST00000494675 ARHGEF5Q12774 1597 aa0.92□□□□□ -2.26
LRIF1-203ENST00000494675 MLH3Q9UHC1 1453 aa0.92□□□□□ -2.26
LRIF1-203ENST00000494675 PIGBOS1A0A0B4J2F0 54 aa0.92□□□□□ -2.26
LRIF1-203ENST00000494675 TRBV6-5A0A0K0K1A5 114 aa0.92□□□□□ -2.26
LRIF1-203ENST00000494675 NBDYA0A0U1RRE5 68 aa0.92□□□□□ -2.26
LRIF1-203ENST00000494675 FXYD1O00168 92 aa0.92□□□□□ -2.26
LRIF1-203ENST00000494675 PDE6GP18545 87 aa0.92□□□□□ -2.26
LRIF1-203ENST00000494675 FXYD4P59646 89 aa0.92□□□□□ -2.26
LRIF1-203ENST00000494675 RPL37AP61513 92 aaKnown RBP0.92□□□□□ -2.26
LRIF1-203ENST00000494675 BVES-AS1Q5T3Y7 98 aa0.92□□□□□ -2.26
LRIF1-203ENST00000494675 XAF1Q6GPH4 301 aa0.92□□□□□ -2.26
LRIF1-203ENST00000494675 Q86TA4 180 aa0.92□□□□□ -2.26
LRIF1-203ENST00000494675 LINC00208Q96KT6 92 aa0.92□□□□□ -2.26
LRIF1-203ENST00000494675 NDUFA4L2Q9NRX3 87 aa0.92□□□□□ -2.26
LRIF1-203ENST00000494675 PRO1854Q9UHT4 67 aa0.92□□□□□ -2.26
LRIF1-203ENST00000494675 C22orf24Q9Y442 160 aa0.92□□□□□ -2.26
LRIF1-203ENST00000494675 URB1O60287 2271 aaKnown RBP0.92□□□□□ -2.26
LRIF1-203ENST00000494675 MADDQ8WXG6 1647 aa0.91□□□□□ -2.26
LRIF1-203ENST00000494675 TRBV6-7A0A0A0MS04 114 aa0.91□□□□□ -2.26
LRIF1-203ENST00000494675 TRBV7-1A0A0A6YYK4 115 aa0.91□□□□□ -2.26
LRIF1-203ENST00000494675 A0A0J9YY99 117 aa0.91□□□□□ -2.26
LRIF1-203ENST00000494675 SMIM31A0A1B0GVY4 71 aa0.91□□□□□ -2.26
LRIF1-203ENST00000494675 F8WEM9 126 aa0.91□□□□□ -2.26
LRIF1-203ENST00000494675 CFDP00746 253 aaPredicted RBP0.91□□□□□ -2.26
LRIF1-203ENST00000494675 IGHV3-33P01772 117 aa0.91□□□□□ -2.26
LRIF1-203ENST00000494675 IGLC2P0DOY2 106 aa0.91□□□□□ -2.26
LRIF1-203ENST00000494675 IGLC3P0DOY3 106 aa0.91□□□□□ -2.26
LRIF1-203ENST00000494675 FXYD3Q14802 87 aa0.91□□□□□ -2.26
LRIF1-203ENST00000494675 SPATA45Q537H7 98 aa0.91□□□□□ -2.26
LRIF1-203ENST00000494675 C10orf55Q5SWW7 151 aa0.91□□□□□ -2.26
LRIF1-203ENST00000494675 C6orf52Q5T4I8 152 aa0.91□□□□□ -2.26
LRIF1-203ENST00000494675 PPP1R1CQ8WVI7 109 aa0.91□□□□□ -2.26
LRIF1-203ENST00000494675 DMAC1Q96GE9 116 aa0.91□□□□□ -2.26
LRIF1-203ENST00000494675 OBSCN-AS1Q96MR7 158 aa0.91□□□□□ -2.26
LRIF1-203ENST00000494675 TRGV9Q99603 122 aa0.91□□□□□ -2.26
LRIF1-203ENST00000494675 PSENENQ9NZ42 101 aa0.91□□□□□ -2.26
LRIF1-203ENST00000494675 NAV3Q8IVL0 2385 aa0.91□□□□□ -2.26
LRIF1-203ENST00000494675 ARFGEF2Q9Y6D5 1785 aa0.91□□□□□ -2.26
LRIF1-203ENST00000494675 AHCTF1Q8WYP5 2266 aa0.91□□□□□ -2.26
LRIF1-203ENST00000494675 DAPK1P53355 1430 aa0.91□□□□□ -2.26
LRIF1-203ENST00000494675 POLA1P09884 1462 aaPredicted RBP0.91□□□□□ -2.26
LRIF1-203ENST00000494675 MACF1Q9UPN3 7388 aaKnown RBP0.91□□□□□ -2.26
LRIF1-203ENST00000494675 ERICH3Q5RHP9 1530 aa0.91□□□□□ -2.26
LRIF1-203ENST00000494675 ARHGEF12Q9NZN5 1544 aa0.91□□□□□ -2.26
LRIF1-203ENST00000494675 UBE2D3P61077 147 aa0.91□□□□□ -2.26
LRIF1-203ENST00000494675 UBE2D2P62837 147 aa0.91□□□□□ -2.26
LRIF1-203ENST00000494675 SPAG11BQ08648 103 aa0.91□□□□□ -2.26
LRIF1-203ENST00000494675 ZNF56Q15929 161 aa0.91□□□□□ -2.26
LRIF1-203ENST00000494675 SPAG11AQ6PDA7 123 aa0.91□□□□□ -2.26
LRIF1-203ENST00000494675 ZNF818PQ6ZRF7 136 aa0.91□□□□□ -2.26
LRIF1-203ENST00000494675 COX7B2Q8TF08 81 aa0.91□□□□□ -2.26
LRIF1-203ENST00000494675 CYP4F30PQ9H0H9 118 aa0.91□□□□□ -2.26
LRIF1-203ENST00000494675 SMCO4Q9NRQ5 59 aa0.91□□□□□ -2.26
LRIF1-203ENST00000494675 MED9Q9NWA0 146 aa0.91□□□□□ -2.26
LRIF1-203ENST00000494675 RRBP1Q9P2E9 1410 aaKnown RBP0.91□□□□□ -2.26
LRIF1-203ENST00000494675 MRC1P22897 1456 aa0.9□□□□□ -2.26
LRIF1-203ENST00000494675 PLCE1Q9P212 2302 aa0.9□□□□□ -2.26
LRIF1-203ENST00000494675 PLIN4Q96Q06 1357 aa0.9□□□□□ -2.26
LRIF1-203ENST00000494675 HMGXB3Q12766 1538 aa0.9□□□□□ -2.26
LRIF1-203ENST00000494675 ZNF142P52746 1687 aaPredicted RBP0.9□□□□□ -2.26
LRIF1-203ENST00000494675 KIF21AQ7Z4S6 1674 aa0.9□□□□□ -2.26
LRIF1-203ENST00000494675 IGLV3-32A0A0A0MS00 114 aa0.9□□□□□ -2.27
LRIF1-203ENST00000494675 FAM223BA6NKX1 122 aa0.9□□□□□ -2.27
LRIF1-203ENST00000494675 HIGD1CA8MV81 97 aa0.9□□□□□ -2.27
LRIF1-203ENST00000494675 CCL3L1P16619 93 aa0.9□□□□□ -2.27
LRIF1-203ENST00000494675 CACNA1BQ00975 2339 aa0.9□□□□□ -2.27
LRIF1-203ENST00000494675 SSBP1Q04837 148 aaKnown RBP0.9□□□□□ -2.27
LRIF1-203ENST00000494675 CFAP126Q5VTH2 177 aa0.9□□□□□ -2.27
LRIF1-203ENST00000494675 PRR15LQ9BU68 103 aa0.9□□□□□ -2.27
LRIF1-203ENST00000494675 V9GYH0 126 aa0.9□□□□□ -2.27
LRIF1-203ENST00000494675 DOPEY2Q9Y3R5 2298 aa0.9□□□□□ -2.27
LRIF1-203ENST00000494675 NEXMIFQ5QGS0 1516 aa0.9□□□□□ -2.27
LRIF1-203ENST00000494675 GOLGA4Q13439 2230 aaKnown RBP0.9□□□□□ -2.27
LRIF1-203ENST00000494675 SCN11AQ9UI33 1791 aa0.89□□□□□ -2.27
LRIF1-203ENST00000494675 A0A087WTM6 91 aa0.89□□□□□ -2.27
LRIF1-203ENST00000494675 A0A087WVE0 104 aa0.89□□□□□ -2.27
LRIF1-203ENST00000494675 TRAV1-2A0A0B4J238 106 aa0.89□□□□□ -2.27
LRIF1-203ENST00000494675 IQCF6A8MYZ5 107 aa0.89□□□□□ -2.27
LRIF1-203ENST00000494675 M0R135 149 aa0.89□□□□□ -2.27
LRIF1-203ENST00000494675 DYNLRB1Q9NP97 96 aa0.89□□□□□ -2.27
LRIF1-203ENST00000494675 CDC42SE2Q9NRR3 84 aa0.89□□□□□ -2.27
LRIF1-203ENST00000494675 TMEM14BQ9NUH8 114 aa0.89□□□□□ -2.27
LRIF1-203ENST00000494675 MYO3AQ8NEV4 1616 aa0.89□□□□□ -2.27
LRIF1-203ENST00000494675 CCDC88BA6NC98 1476 aa0.89□□□□□ -2.27
LRIF1-203ENST00000494675 CCDC141Q6ZP82 1450 aa0.89□□□□□ -2.27
LRIF1-203ENST00000494675 UBR3Q6ZT12 1888 aa0.89□□□□□ -2.27
LRIF1-203ENST00000494675 KNDC1Q76NI1 1749 aa0.89□□□□□ -2.27
LRIF1-203ENST00000494675 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.89□□□□□ -2.27
LRIF1-203ENST00000494675 ZNF815PA8K554 130 aa0.89□□□□□ -2.27
LRIF1-203ENST00000494675 IGHV3-30P01768 117 aa0.89□□□□□ -2.27
LRIF1-203ENST00000494675 IGHV3-30-5P0DP03 117 aa0.89□□□□□ -2.27
LRIF1-203ENST00000494675 ELOF1P60002 83 aaKnown RBP0.89□□□□□ -2.27
LRIF1-203ENST00000494675 VMO1Q7Z5L0 202 aa0.89□□□□□ -2.27
LRIF1-203ENST00000494675 C5orf56Q8N8D9 126 aa0.89□□□□□ -2.27
LRIF1-203ENST00000494675 FAM167A-AS1Q96KT0 104 aa0.89□□□□□ -2.27
LRIF1-203ENST00000494675 ITSN1Q15811 1721 aa0.89□□□□□ -2.27
LRIF1-203ENST00000494675 RGPD2P0DJD1 1756 aa0.88□□□□□ -2.27
LRIF1-203ENST00000494675 TMEM131LA2VDJ0 1609 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms