RNA–Protein interactions for RNA: ENST00000494396.5

SYP-208, Transcript of synaptophysin, humanhuman

TSL 2

Gene SYP, Length 2,062 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-208ENST00000494396 FAM74A4Q5TZK3 123 aa12.18□□□□□ -0.46
SYP-208ENST00000494396 AKAP9Q99996 3911 aa12.18□□□□□ -0.46
SYP-208ENST00000494396 ATP5G1P05496 136 aa12.18□□□□□ -0.46
SYP-208ENST00000494396 PRSS2P07478 247 aa12.18□□□□□ -0.46
SYP-208ENST00000494396 TMEM61Q8N0U2 210 aa12.18□□□□□ -0.46
SYP-208ENST00000494396 SMIM20Q8N5G0 67 aa12.18□□□□□ -0.46
SYP-208ENST00000494396 RNF152Q8N8N0 203 aa12.18□□□□□ -0.46
SYP-208ENST00000494396 NDUFA12Q9UI09 145 aa12.18□□□□□ -0.46
SYP-208ENST00000494396 TINCRA0A1B0GVN0 87 aa12.17□□□□□ -0.46
SYP-208ENST00000494396 COPS9Q8WXC6 57 aa12.17□□□□□ -0.46
SYP-208ENST00000494396 UBE2E2Q96LR5 201 aa12.17□□□□□ -0.46
SYP-208ENST00000494396 OPRPNQ99935 248 aaPredicted RBP12.17□□□□□ -0.46
SYP-208ENST00000494396 TRGV11A0A075B6L2 103 aa12.16□□□□□ -0.46
SYP-208ENST00000494396 TRAV12-3A0A0B4J271 114 aa12.16□□□□□ -0.46
SYP-208ENST00000494396 DEFB1P60022 68 aa12.16□□□□□ -0.46
SYP-208ENST00000494396 HERV-K104P63124 156 aa12.16□□□□□ -0.46
SYP-208ENST00000494396 VSIG2Q96IQ7 327 aa12.16□□□□□ -0.46
SYP-208ENST00000494396 CD28P10747 220 aa12.15□□□□□ -0.46
SYP-208ENST00000494396 SPXQ9BT56 116 aa12.15□□□□□ -0.46
SYP-208ENST00000494396 IGHV3-64A0A075B6Q5 118 aa12.15□□□□□ -0.46
SYP-208ENST00000494396 DCANP1Q8TF63 244 aa12.15□□□□□ -0.46
SYP-208ENST00000494396 MTORP42345 2549 aa12.14□□□□□ -0.47
SYP-208ENST00000494396 IGHV1OR15-1A0A075B7D0 117 aa12.14□□□□□ -0.47
SYP-208ENST00000494396 ESM1Q9NQ30 184 aa12.14□□□□□ -0.47
SYP-208ENST00000494396 EDN2P20800 178 aa12.14□□□□□ -0.47
SYP-208ENST00000494396 Q6ZSV7 163 aa12.13□□□□□ -0.47
SYP-208ENST00000494396 IGKV3-7A0A075B6H7 116 aa12.12□□□□□ -0.47
SYP-208ENST00000494396 PIK3CD-AS1Q5SR53 167 aa12.12□□□□□ -0.47
SYP-208ENST00000494396 CIRBPQ14011 172 aaKnown RBP12.12□□□□□ -0.47
SYP-208ENST00000494396 ADAMTSL4-AS1Q5T5F5 129 aa12.12□□□□□ -0.47
SYP-208ENST00000494396 OTOGQ6ZRI0 2925 aa12.11□□□□□ -0.47
SYP-208ENST00000494396 SNRPD3P62318 126 aaKnown RBP12.11□□□□□ -0.47
SYP-208ENST00000494396 LINC00643Q86TS7 51 aa12.11□□□□□ -0.47
SYP-208ENST00000494396 SMR3AQ99954 134 aa12.11□□□□□ -0.47
SYP-208ENST00000494396 PPDPFQ9H3Y8 114 aa12.11□□□□□ -0.47
SYP-208ENST00000494396 TNFRSF18Q9Y5U5 241 aa12.11□□□□□ -0.47
SYP-208ENST00000494396 HIVEP2P31629 2446 aa12.11□□□□□ -0.47
SYP-208ENST00000494396 SHISA2Q6UWI4 295 aa12.1□□□□□ -0.47
SYP-208ENST00000494396 DEFB104AQ8WTQ1 72 aa12.1□□□□□ -0.47
SYP-208ENST00000494396 RNASE1P07998 156 aaKnown RBP12.1□□□□□ -0.47
SYP-208ENST00000494396 CLEC2BQ92478 149 aa12.1□□□□□ -0.47
SYP-208ENST00000494396 DUX3Q96PT4 197 aa12.1□□□□□ -0.47
SYP-208ENST00000494396 NF1P21359 2839 aa12.09□□□□□ -0.47
SYP-208ENST00000494396 NDUFA1O15239 70 aa12.09□□□□□ -0.47
SYP-208ENST00000494396 CXCL5P42830 114 aa12.09□□□□□ -0.47
SYP-208ENST00000494396 LY6G6DO95868 133 aa12.09□□□□□ -0.47
SYP-208ENST00000494396 HOXD3P31249 432 aaPredicted RBP12.09□□□□□ -0.47
SYP-208ENST00000494396 SDIM1Q6ZPB5 146 aa12.09□□□□□ -0.47
SYP-208ENST00000494396 FAM104AQ969W3 186 aa12.09□□□□□ -0.47
SYP-208ENST00000494396 LINC01587Q99440 93 aa12.09□□□□□ -0.47
SYP-208ENST00000494396 TRAV8-3A0A0A6YYJ7 113 aa12.08□□□□□ -0.48
SYP-208ENST00000494396 COX7A2LO14548 114 aa12.08□□□□□ -0.48
SYP-208ENST00000494396 SYNJ2BPP57105 145 aa12.08□□□□□ -0.48
SYP-208ENST00000494396 TRACP01848 142 aa12.07□□□□□ -0.48
SYP-208ENST00000494396 TIRAPP58753 221 aa12.07□□□□□ -0.48
SYP-208ENST00000494396 C4orf3Q8WVX3 66 aa12.07□□□□□ -0.48
SYP-208ENST00000494396 CHCHD5Q9BSY4 110 aa12.07□□□□□ -0.48
SYP-208ENST00000494396 IGLV5-45A0A087WSX0 123 aa12.07□□□□□ -0.48
SYP-208ENST00000494396 ADARB2-AS1A8MUL3 147 aa12.07□□□□□ -0.48
SYP-208ENST00000494396 UQCRQO14949 82 aa12.07□□□□□ -0.48
SYP-208ENST00000494396 HILS1P60008 231 aa12.07□□□□□ -0.48
SYP-208ENST00000494396 KHDC1LQ5JSQ8 128 aa12.07□□□□□ -0.48
SYP-208ENST00000494396 C18orf65Q6ZTR6 163 aa12.06□□□□□ -0.48
SYP-208ENST00000494396 FAM236AA0A1B0GUQ0 79 aa12.05□□□□□ -0.48
SYP-208ENST00000494396 FAM236BA0A1B0GV22 79 aa12.05□□□□□ -0.48
SYP-208ENST00000494396 FAM222AQ5U5X8 452 aa12.05□□□□□ -0.48
SYP-208ENST00000494396 C3orf22Q8N5N4 141 aa12.05□□□□□ -0.48
SYP-208ENST00000494396 DAND5Q8N907 189 aa12.05□□□□□ -0.48
SYP-208ENST00000494396 PEMTQ9UBM1 199 aa12.05□□□□□ -0.48
SYP-208ENST00000494396 UBE2D4Q9Y2X8 147 aa12.05□□□□□ -0.48
SYP-208ENST00000494396 DEFB136Q30KP8 78 aa12.04□□□□□ -0.48
SYP-208ENST00000494396 DNAJC30Q96LL9 226 aa12.04□□□□□ -0.48
SYP-208ENST00000494396 C16orf95Q9H693 158 aa12.04□□□□□ -0.48
SYP-208ENST00000494396 INAFM2P0DMQ5 153 aa12.04□□□□□ -0.48
SYP-208ENST00000494396 K7EQG2 157 aa12.03□□□□□ -0.48
SYP-208ENST00000494396 LINC00526Q96FQ7 95 aa12.03□□□□□ -0.48
SYP-208ENST00000494396 CITED2Q99967 270 aaPredicted RBP12.03□□□□□ -0.48
SYP-208ENST00000494396 ANK3Q12955 4377 aaKnown RBP12.03□□□□□ -0.48
SYP-208ENST00000494396 SLURP1P55000 103 aa12.02□□□□□ -0.48
SYP-208ENST00000494396 LINC01006Q8NI28 216 aa12.02□□□□□ -0.49
SYP-208ENST00000494396 CHCHD7Q9BUK0 85 aa12.02□□□□□ -0.49
SYP-208ENST00000494396 NDUFA7O95182 113 aa12.01□□□□□ -0.49
SYP-208ENST00000494396 LINC00308Q8TCZ7 52 aa12.01□□□□□ -0.49
SYP-208ENST00000494396 TRAV12-2A0A075B6T6 113 aa12.01□□□□□ -0.49
SYP-208ENST00000494396 C9orf153Q5TBE3 101 aa12.01□□□□□ -0.49
SYP-208ENST00000494396 SETD2Q9BYW2 2564 aaPredicted RBP12□□□□□ -0.49
SYP-208ENST00000494396 HERVK_113P63121 156 aa12□□□□□ -0.49
SYP-208ENST00000494396 C5orf38Q86SI9 138 aa12□□□□□ -0.49
SYP-208ENST00000494396 IGLV5-39A0A0G2JS06 123 aa11.99□□□□□ -0.49
SYP-208ENST00000494396 PF4P02776 101 aa11.99□□□□□ -0.49
SYP-208ENST00000494396 ZNF415Q09FC8 603 aa11.99□□□□□ -0.49
SYP-208ENST00000494396 SPINK13Q1W4C9 94 aa11.99□□□□□ -0.49
SYP-208ENST00000494396 FAM19A3Q7Z5A8 133 aa11.99□□□□□ -0.49
SYP-208ENST00000494396 OVOL2Q9BRP0 275 aa11.99□□□□□ -0.49
SYP-208ENST00000494396 A0A1B0GX51 115 aa11.99□□□□□ -0.49
SYP-208ENST00000494396 C11orf44Q8N8P7 122 aa11.98□□□□□ -0.49
SYP-208ENST00000494396 FLNBO75369 2602 aaKnown RBP11.97□□□□□ -0.49
SYP-208ENST00000494396 NSD1Q96L73 2696 aaPredicted RBP11.97□□□□□ -0.49
SYP-208ENST00000494396 INAFM1C9JVW0 142 aa11.97□□□□□ -0.49
SYP-208ENST00000494396 NPC2P61916 151 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms