RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 FAM104AQ969W3 186 aa7.79□□□□□ -1.16
MCF2L-231ENST00000494043 TMEM101Q96IK0 257 aa7.79□□□□□ -1.16
MCF2L-231ENST00000494043 OPRPNQ99935 248 aaPredicted RBP7.79□□□□□ -1.16
MCF2L-231ENST00000494043 UPK3BQ9BT76 320 aa7.79□□□□□ -1.16
MCF2L-231ENST00000494043 IGLV4-60A0A075B6I1 120 aa7.78□□□□□ -1.16
MCF2L-231ENST00000494043 A0A087WX48 190 aa7.78□□□□□ -1.16
MCF2L-231ENST00000494043 C3orf84H3BNL1 204 aa7.78□□□□□ -1.16
MCF2L-231ENST00000494043 Q6ZN92 141 aa7.78□□□□□ -1.16
MCF2L-231ENST00000494043 Q8N3U1 123 aa7.78□□□□□ -1.16
MCF2L-231ENST00000494043 Q8N976 141 aa7.78□□□□□ -1.16
MCF2L-231ENST00000494043 OR10D4PQ8NGN7 298 aa7.78□□□□□ -1.16
MCF2L-231ENST00000494043 BAALCQ8WXS3 180 aa7.78□□□□□ -1.16
MCF2L-231ENST00000494043 MAP1LC3CQ9BXW4 147 aa7.78□□□□□ -1.16
MCF2L-231ENST00000494043 C3orf79P0CE67 100 aa7.77□□□□□ -1.17
MCF2L-231ENST00000494043 KRTDAPP60985 99 aa7.77□□□□□ -1.17
MCF2L-231ENST00000494043 LINC01556Q5JQF7 62 aa7.77□□□□□ -1.17
MCF2L-231ENST00000494043 PAPPA-AS1Q5QFB9 102 aa7.77□□□□□ -1.17
MCF2L-231ENST00000494043 CASC10Q5T4H9 136 aa7.77□□□□□ -1.17
MCF2L-231ENST00000494043 UBE2DNLQ8IWF7 75 aa7.77□□□□□ -1.17
MCF2L-231ENST00000494043 ZNF664Q8N3J9 261 aa7.77□□□□□ -1.17
MCF2L-231ENST00000494043 CDC42SE2Q9NRR3 84 aa7.77□□□□□ -1.17
MCF2L-231ENST00000494043 VPS13DQ5THJ4 4388 aa7.76□□□□□ -1.17
MCF2L-231ENST00000494043 LOC105371267A0A1B0GV96 52 aa7.76□□□□□ -1.17
MCF2L-231ENST00000494043 SYS1-DBNDD2H3BUS1 97 aa7.76□□□□□ -1.17
MCF2L-231ENST00000494043 PRSS1P07477 247 aa7.76□□□□□ -1.17
MCF2L-231ENST00000494043 DNAH10OSP0CZ25 163 aa7.76□□□□□ -1.17
MCF2L-231ENST00000494043 RNASE13Q5GAN3 156 aaKnown RBP7.76□□□□□ -1.17
MCF2L-231ENST00000494043 TEX43Q6ZNM6 134 aa7.76□□□□□ -1.17
MCF2L-231ENST00000494043 AMELXQ99217 191 aa7.76□□□□□ -1.17
MCF2L-231ENST00000494043 VCX2Q9H322 139 aa7.76□□□□□ -1.17
MCF2L-231ENST00000494043 TRAV12-1A0A0B4J245 112 aa7.75□□□□□ -1.17
MCF2L-231ENST00000494043 H0Y8G0 127 aa7.75□□□□□ -1.17
MCF2L-231ENST00000494043 SIVA1O15304 175 aa7.75□□□□□ -1.17
MCF2L-231ENST00000494043 IGHV3-30P01768 117 aa7.75□□□□□ -1.17
MCF2L-231ENST00000494043 IGHV3-33P01772 117 aa7.75□□□□□ -1.17
MCF2L-231ENST00000494043 IGHV3-30-3P0DP02 117 aa7.75□□□□□ -1.17
MCF2L-231ENST00000494043 IGHV3-30-5P0DP03 117 aa7.75□□□□□ -1.17
MCF2L-231ENST00000494043 PMVKQ15126 192 aa7.75□□□□□ -1.17
MCF2L-231ENST00000494043 ZC2HC1BQ5TFG8 222 aa7.75□□□□□ -1.17
MCF2L-231ENST00000494043 PET117Q6UWS5 81 aa7.75□□□□□ -1.17
MCF2L-231ENST00000494043 SPATA12Q7Z6I5 190 aa7.75□□□□□ -1.17
MCF2L-231ENST00000494043 CST9LQ9H4G1 147 aa7.75□□□□□ -1.17
MCF2L-231ENST00000494043 DNAH1Q9P2D7 4330 aa7.74□□□□□ -1.17
MCF2L-231ENST00000494043 PRSS29PA6NIE9 313 aa7.74□□□□□ -1.17
MCF2L-231ENST00000494043 ANGP03950 147 aaKnown RBP7.74□□□□□ -1.17
MCF2L-231ENST00000494043 C2orf88Q9BSF0 95 aa7.74□□□□□ -1.17
MCF2L-231ENST00000494043 AKR1D1P51857 326 aa7.73□□□□□ -1.17
MCF2L-231ENST00000494043 ODF1Q14990 250 aa7.73□□□□□ -1.17
MCF2L-231ENST00000494043 LINC01545Q5VT33 79 aa7.73□□□□□ -1.17
MCF2L-231ENST00000494043 LGALS9CQ6DKI2 356 aa7.73□□□□□ -1.17
MCF2L-231ENST00000494043 LINC00269Q8N2A0 174 aa7.73□□□□□ -1.17
MCF2L-231ENST00000494043 Q9H8V8 135 aa7.73□□□□□ -1.17
MCF2L-231ENST00000494043 C20orf202A1L168 122 aa7.72□□□□□ -1.17
MCF2L-231ENST00000494043 CLPSL2Q6UWE3 100 aa7.72□□□□□ -1.17
MCF2L-231ENST00000494043 PRR34Q9NV39 138 aa7.72□□□□□ -1.17
MCF2L-231ENST00000494043 KLK12Q9UKR0 248 aa7.72□□□□□ -1.17
MCF2L-231ENST00000494043 CHTOPQ9Y3Y2 248 aaKnown RBP7.72□□□□□ -1.17
MCF2L-231ENST00000494043 ALMS1Q8TCU4 4167 aa7.72□□□□□ -1.17
MCF2L-231ENST00000494043 TRAV13-1A0A0B4J241 112 aa7.71□□□□□ -1.18
MCF2L-231ENST00000494043 F8VRH5 84 aa7.71□□□□□ -1.18
MCF2L-231ENST00000494043 UBE2D1P51668 147 aa7.71□□□□□ -1.18
MCF2L-231ENST00000494043 REG3AQ06141 175 aa7.71□□□□□ -1.18
MCF2L-231ENST00000494043 PMCHL2Q9BQD1 86 aa7.71□□□□□ -1.18
MCF2L-231ENST00000494043 MRPL35Q9NZE8 188 aaKnown RBP7.71□□□□□ -1.18
MCF2L-231ENST00000494043 LYSTQ99698 3801 aa7.71□□□□□ -1.18
MCF2L-231ENST00000494043 IGLV4-69A0A075B6H9 119 aa7.7□□□□□ -1.18
MCF2L-231ENST00000494043 IGKV3OR2-268A0A0C4DH90 116 aa7.7□□□□□ -1.18
MCF2L-231ENST00000494043 A0A0J9YXV3 536 aa7.7□□□□□ -1.18
MCF2L-231ENST00000494043 LINC00959A0A1B0GUT2 108 aa7.7□□□□□ -1.18
MCF2L-231ENST00000494043 K7EP13 123 aa7.7□□□□□ -1.18
MCF2L-231ENST00000494043 CRPP02741 224 aa7.7□□□□□ -1.18
MCF2L-231ENST00000494043 JOSD1Q15040 202 aaPredicted RBP7.7□□□□□ -1.18
MCF2L-231ENST00000494043 ENHOQ6UWT2 76 aa7.7□□□□□ -1.18
MCF2L-231ENST00000494043 C10orf126Q8N4M7 172 aa7.7□□□□□ -1.18
MCF2L-231ENST00000494043 UBE2WQ96B02 151 aa7.7□□□□□ -1.18
MCF2L-231ENST00000494043 TRAV9-2A0A087WT02 112 aa7.69□□□□□ -1.18
MCF2L-231ENST00000494043 DPM2O94777 84 aa7.69□□□□□ -1.18
MCF2L-231ENST00000494043 SCGB1D1O95968 90 aa7.69□□□□□ -1.18
MCF2L-231ENST00000494043 IGLC3P0DOY3 106 aa7.69□□□□□ -1.18
MCF2L-231ENST00000494043 PLNP26678 52 aa7.69□□□□□ -1.18
MCF2L-231ENST00000494043 FAM19A3Q7Z5A8 133 aa7.69□□□□□ -1.18
MCF2L-231ENST00000494043 NFE4Q86UQ8 179 aa7.69□□□□□ -1.18
MCF2L-231ENST00000494043 TINCRA0A1B0GVN0 87 aa7.68□□□□□ -1.18
MCF2L-231ENST00000494043 C11orf86A6NJI1 115 aa7.68□□□□□ -1.18
MCF2L-231ENST00000494043 IBA57-AS1B1ANH7 110 aa7.68□□□□□ -1.18
MCF2L-231ENST00000494043 CCL25O15444 150 aa7.68□□□□□ -1.18
MCF2L-231ENST00000494043 IGKCP01834 107 aa7.68□□□□□ -1.18
MCF2L-231ENST00000494043 SEC11AP67812 179 aa7.68□□□□□ -1.18
MCF2L-231ENST00000494043 SS18Q15532 418 aa7.68□□□□□ -1.18
MCF2L-231ENST00000494043 MIAQ16674 131 aa7.68□□□□□ -1.18
MCF2L-231ENST00000494043 PYY3Q5JQD4 70 aa7.68□□□□□ -1.18
MCF2L-231ENST00000494043 LINC00242Q5T6M2 205 aa7.68□□□□□ -1.18
MCF2L-231ENST00000494043 LINC00476Q8WZB0 136 aa7.68□□□□□ -1.18
MCF2L-231ENST00000494043 CHAC1Q9BUX1 264 aa7.68□□□□□ -1.18
MCF2L-231ENST00000494043 TRAV8-4A0A0B4J246 113 aa7.67□□□□□ -1.18
MCF2L-231ENST00000494043 TTC32Q5I0X7 151 aa7.67□□□□□ -1.18
MCF2L-231ENST00000494043 KRTAP1-5Q9BYS1 174 aa7.67□□□□□ -1.18
MCF2L-231ENST00000494043 GEMIN7Q9H840 131 aaKnown RBP7.67□□□□□ -1.18
MCF2L-231ENST00000494043 IGLV10-54A0A075B6I4 117 aa7.66□□□□□ -1.18
MCF2L-231ENST00000494043 IGLV5-45A0A087WSX0 123 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms